Commit graph

123 commits

Author SHA1 Message Date
Richard Stiskalek
c4557cf35b
Matching of observations (#127)
* Rename file

* Add indents

* Update imports

* Add counting

* Docs

* Add nb

* Rename nb

* Update nb

* Add PV processing

* Update nb

* Add Pantheon+groups

* Update submission scripts

* Add Pantheon+zSN

* Update nb

* Edit param

* Matchin SFI

* Update nb

* Fix path bug

* Add list of clusters

* Update imports

* Update imports

* Add cartesian & mass of clusters

* Add observation to halo matching

* Add nb

* Add inverse CDF

* Add import

* Update nb

* Add comments
2024-04-23 12:02:09 +01:00
Richard Stiskalek
3876985f26
Extend enclosed density to all CB2 (#126)
* Add borg2 flag

* add borg2_all

* Undo a comment?

* ADd borg2

* Update notebook

* Update nb

* Add external halo catalogue

* Add MDPL2

* Add BORG2 density profile plot

* Add more params

* Add comments
2024-04-10 11:34:07 +02:00
Richard Stiskalek
ee222cd010
Fix overlap runs (#125)
* Update nb

* Update script

* Update script

* Rename

* Update script

* Update script

* Remove warning

* Ignore minors when extracting MAH

* Fix paths bug

* Move notebooks

* Move files

* Rename and delete things

* Rename file

* Move file

* Rename things

* Remove old print statement

* Add basic MAH plot

* Add random MAH path

* Output snapshot numbers

* Add MAH random extraction

* Fix redshift bug

* Edit script

* Add extracting random MAH

* Little updates

* Add CB2 redshift

* Add some caching

* Add diagnostic plots

* Add caching

* Minor updates

* Update nb

* Update notebook

* Update script

* Add Sorce randoms

* Add CB2 varysmall

* Update nb

* Update nb

* Update nb

* Use catalogue HMF

* Move definition of radec2galactic

* Update nb

* Update import

* Update import

* Add galatic coords to catalogues

* Update nb
2024-04-08 11:23:21 +02:00
Richard Stiskalek
da43031877
Tests on mock PV catalogues (#123)
* Rename nb

* Add nb

* Update scrtip

* Update script

* Add reading of CB2 mocks

* CB2 mocks support

* Add mock generator

* Add mock support

* Add CB2 mock support

* Update nb for mocks

* Update script

* Update nb

* Update nbs
2024-04-02 00:19:14 +02:00
Richard Stiskalek
29b37172fa
Add SFI groups (#121)
* Update LOS sampling

* Bring SD back to speed

* Update nb

* Update script

* Update requirements

* Update flow chi2 calc

* Update script

* Add support for SFI groups

* Update plot

* Update script

* Update script
2024-03-26 15:11:04 +01:00
Richard Stiskalek
27c1f9249b
Observer velocity script (#120)
* Rename script

* Delete scripts

* Add script

* Edit script

* Add script

* Update nb

* Update plotting

* Update .gitignore

* Update nb

* Update nb

* Add option to keep beta fixed
2024-03-26 10:42:53 +01:00
Richard Stiskalek
4093186f9a
Add z_obs output (#119)
* Update SN model to output zobs too

* Add TF predicted zobs

* Add imoprt

* Update nb

* Calculate chi2

* Update nb

* Update script
2024-03-22 18:10:40 +01:00
Richard Stiskalek
f7285b2600
More flow (#118)
* Add GoF calculation

* Add import

* Add base flow

* Add reading of ndata

* Update nb

* Update plotting

* Update script

* Update plots

* Updaet plo

* Add script

* Update nb

* Update nb

* Update script

* Update script

* Update nb

* Remove imports

* Improve labelling

* Improve flow calibration

* Add bulk flow plots

* Update flow

* Update scrit

* Calculate more radial steps

* Update bulk

* Update script

* Update nb
2024-03-21 16:50:37 +01:00
rstiskalek
a9cb8943d6 Update script 2024-03-19 14:36:09 +00:00
Richard Stiskalek
0a859a9a06
Write particles to ASCII (#117)
* Add option to output high-resolution particles only

* Add ASCII writing of simulatios
2024-03-19 09:23:52 +01:00
Richard Stiskalek
fb4abebeb6
Add more flow modelling (#115)
* Add SN calibration model

* Update imports

* Scale Carrick field

* Minor updates to flow validation

* Update script

* Update flow model

* Add CSiBORG2

* Add CSiboRG2 params

* Update imports

* Add regular grid interpolator to LOS

* Add nb

* Remove old code

* Update scripts

* Minor updates

* Minor updates

* Add TF

* Minor update

* Update notebook

* Update imports

* Add scan and loss of numpyro

* Add Pantheon

* Update svript

* Updaten b

* Add model loader

* Add jackknife

* Add evidence

* Update dr

* Add BIC to the flow model

* Update srcipt

* Update nb

* Update nb

* Update scripts
2024-03-16 17:02:00 +00:00
Richard Stiskalek
a65e3cb15b
Add simple distance flow model (#114)
* Add imports

* Add field LOS paths

* Add basic flow model

* Edit script

* Add nb

* Add nb

* Update nb

* Add some docs

* Add RA reading

* Add imoprts

* Updates to the flow model

* Update script

* Bring back A2

* Update imports

* Update imports

* Add Carrick to ICs

* Add Carrick boxsize

* Add Carrick and fix minor bugs

* Add Carrick box

* Update script

* Edit imports

* Add fixed flow!

* Update omega_m and add it

* Update nb

* Update nb

* Update nb

* Remove old print statements

* Update params

* Add thinning of chains

* Add import

* Add flow validation script

* Add submit script

* Add ksmooth

* Update nb

* Update params

* Update script

* Update string

* Move where distributions are defined

* Add density bias parameter

* Add lognorm mean

* Update scripts

* Update script
2024-03-08 10:44:19 +00:00
Richard Stiskalek
fb93f85543 Make sure dumpfolder created only on rank 0 2024-02-27 13:28:41 +00:00
Richard Stiskalek
66d9f46919
Evaluate LOS distances (#113)
* Add field_los

* fix typo

* add fix bug

* bug fixes

* Add docs

* Add more docs
2024-02-27 12:40:52 +00:00
Richard Stiskalek
1c736aaede
Density field tests (#110)
* Add imports

* Remove file

* Add boxsize argument

* Add script

* Update script

* Edit script

* Add nbs
2024-02-26 12:36:29 +00:00
Richard Stiskalek
f0ab6fc9b4
Add TNG field (#108)
* Add TNG catalogue script

* Add imoprt

* Add TNG box

* Add import

* Fix little bug

* Add TNG300-1

* Add shell scripts

* Organize .gitignore

* Add scatter to file name

* Add argument scatter

* Add threshold on mass

* Update nb

* Add scatter argument

* Add scattering of radial positions

* Update nb

* Update script
2024-02-07 09:11:49 +00:00
Richard Stiskalek
9e4b34f579
Overlap fixing and more (#107)
* Update README

* Update density field reader

* Update name of SDSSxALFAFA

* Fix quick bug

* Add little fixes

* Update README

* Put back fit_init

* Add paths to initial snapshots

* Add export

* Remove some choices

* Edit README

* Add Jens' comments

* Organize imports

* Rename snapshot

* Add additional print statement

* Add paths to initial snapshots

* Add masses to the initial files

* Add normalization

* Edit README

* Update README

* Fix bug in CSiBORG1 so that does not read fof_00001

* Edit README

* Edit README

* Overwrite comments

* Add paths to init lag

* Fix Quijote path

* Add lagpatch

* Edit submits

* Update README

* Fix numpy int problem

* Update README

* Add a flag to keep the snapshots open when fitting

* Add a flag to keep snapshots open

* Comment out some path issue

* Keep snapshots open

* Access directly snasphot

* Add lagpatch for CSiBORG2

* Add treatment of x-z coordinates flipping

* Add radial velocity field loader

* Update README

* Add lagpatch to Quijote

* Fix typo

* Add setter

* Fix typo

* Update README

* Add output halo cat as ASCII

* Add import

* Add halo plot

* Update README

* Add evaluating field at radial distanfe

* Add field shell evaluation

* Add enclosed mass computation

* Add BORG2 import

* Add BORG boxsize

* Add BORG paths

* Edit run

* Add BORG2 overdensity field

* Add bulk flow clauclation

* Update README

* Add new plots

* Add nbs

* Edit paper

* Update plotting

* Fix overlap paths to contain simname

* Add normalization of positions

* Add default paths to CSiBORG1

* Add overlap path simname

* Fix little things

* Add CSiBORG2 catalogue

* Update README

* Add import

* Add TNG density field constructor

* Add TNG density

* Add draft of calculating BORG ACL

* Fix bug

* Add ACL of enclosed density

* Add nmean acl

* Add galaxy bias calculation

* Add BORG acl notebook

* Add enclosed mass calculation

* Add TNG300-1 dir

* Add TNG300 and BORG1 dir

* Update nb
2024-01-30 16:14:07 +00:00
Richard Stiskalek
1a5477805a
Update evaluate density scripts (#105)
* Edit docs

* Updated interpolated field paths

* Update field sampling script

* Add comments about flipping fields

* Fix little typo

* Edit docs

* Edit hard-coded values

* Fix paths issue

* Add docs

* Switch uncorrected dist to corrected

* Improve error message

* Convert numpy int to Python int

* Add flip of x and z

* Update README

* Edit README

* Fix bug in velocity field calculation

* Fix simple bug

* Add checked axes flipping

* Fix field units

* Update README
2024-01-08 13:56:22 +01:00
Richard Stiskalek
a08109b997
Add snapshots optionally directly to catalogue (#101)
* Add isinstance check

* Add snapshot to cat

* Rename mass_kind to mass_key

* Remove import

* Fix compatiblility

* Remove old export

* Rename import

* Fix calling

* Remove paths dependence

* Update match script

* Add check if halo has no particles
2023-12-20 16:28:26 +01:00
Richard Stiskalek
eb1797e8a9
Clean density calculation (#97)
* Get rid of utils

* Clean up imports

* Move some utils here

* Rename file

* Add simname to boxsize

* Add imports

* Delete old files

* Update README

* Update imports

* Add a new draft of the density calculator

* Update fields

* Draft of new density field calculatiosn

* Add snapshot

* Add boxsizes

* Little updates

* Bring back utils

* Edit docstrings

* Edits imports

* Add progress on snapshots

* edit improts

* add basic snapshot catalogue

* Add support for CSiBORG2 snapshot reader

* add paths to fofcat for csiborg2

* Add more imports

* Add more boxsize

* Add more imports

* Add field readers

* Simplify field paths

* Fix typo

* Add observer vp

* Clean up density field calculation

* Add a short note

* Edit args

* Remove old comments

* Edit docs

* Remove blank line

* Stop flipping RAMSES

* Remove comment

* Edit desc

* Remove normalization

* Remove old dist array

* Remove non-volume weighting

* Remove non-volume weight

* Add ignore of flake8 notebooks

* Fix path typo

* Fix units

* Edit paths docs

* Update nb
2023-12-18 18:09:08 +01:00
Richard Stiskalek
41c22e2166
Improve observer peculiar velocity (#96)
* Fix peculiar velocity cacl

* Move files

* Remove import
2023-12-14 00:40:07 +00:00
rstiskalek
832d943fe7 Update not 2023-12-13 20:48:55 +00:00
rstiskalek
2be20f763b Add matching to no selection 2023-12-13 20:42:58 +00:00
Richard Stiskalek
506d7a7c70
Fix paths (#95)
* Fix args

* Fix paths

* Get rid of quijote backup
2023-12-13 18:03:27 +00:00
Richard Stiskalek
aaa14fc880
Add density field plot and start preparing CSiBORG2 (#94)
* Add RAMSES2HDF5 conversion

* Upload changes

* Clean up

* More clean up

* updates

* Little change

* pep9

* Add basic SPH calculation for a snapshot

* Add submit script

* Remove echo

* Little changes

* Send off changes

* Little formatting

* Little updates

* Add nthreads argument

* Upload chagnes

* Add nthreads arguemnts

* Some local changes..

* Update scripts

* Add submission script

* Update script

* Update params

* Rename CSiBORGBox to CSiBORG1box

* Rename CSiBORG1 reader

* Move files

* Rename folder again

* Add basic plotting here

* Add new skeletons

* Move def

* Update nbs

* Edit directories

* Rename files

* Add units to converted snapshots

* Fix empty dataset bug

* Delete file

* Edits to submission scripts

* Edit paths

* Update .gitignore

* Fix attrs

* Update weighting

* Fix RA/dec bug

* Add FORNAX cluster

* Little edit

* Remove boxes since will no longer need

* Move func back

* Edit to include sort by membership

* Edit paths

* Purge basic things

* Start removing

* Bring file back

* Scratch

* Update the rest

* Improve the entire file

* Remove old things

* Remove old

* Delete old things

* Fully updates

* Rename file

* Edit submit script

* Little things

* Add print statement

* Add here cols_to_structured

* Edit halo cat

* Remove old import

* Add comment

* Update paths manager

* Move file

* Remove file

* Add chains
2023-12-13 16:08:25 +00:00
Richard Stiskalek
944fea5510
Remove old merger tree (#93)
* Edit docs

* Delete merger tree files

* Edit README

* Edit docs
2023-12-07 14:45:06 +00:00
Richard Stiskalek
e972f8e3f2
Add pynbody and other support (#92)
* Simplify box units

* Move old scripts

* Add printing

* Update readers

* Disable boundscheck

* Add new ordering

* Clean up imports

* Enforce dtype and add mass to quijote

* Simplify print statements

* Fix little typos

* Fix key bug

* Bug fixing

* Delete boring comments

* Improve ultimate clumps for PHEW

* Delete boring comments

* Add basic reading

* Remove 0th index HID

* Add flipping of X and Z

* Updates to halo catalogues

* Add ordered caching

* Fix flipping

* Add new flags

* Fix PHEW empty clumps

* Stop over-wrriting

* Little improvements to angular neighbours

* Add catalogue masking

* Change if-else statements

* Cache only filtered data

* Add PHEW cats

* Add comments

* Sort imports

* Get Quijote workign

* Docs

* Add HMF calculation

* Move to old

* Fix angular

* Add great circle distance

* Update imports

* Update impotrts

* Update docs

* Remove unused import

* Fix a quick bug

* Update compatibility

* Rename files

* Renaming

* Improve compatiblity

* Rename snapsht

* Fix snapshot bug

* Update interface

* Finish updating interface

* Update all paths

* Add old scripts

* Add basic halo

* Update imports

* Improve snapshot processing

* Update ordering

* Fix how CM positions accessed

* Add merger paths

* Add imports

* Add merger reading

* Add making a merger tree

* Add a basic merger tree reader

* Add imports

* Add main branch walking + comments + debuggin

* Get tree running

* Add working merger tree walking along main branch

* Add units conversion for merger data

* Add hid_to_array_index

* Update merger tree

* Add mergertree mass to PHEWcat

* Edit comments

* Add this to track changes...

* Fix a little bug

* Add mergertree mass

* Add cache clearing

* Improve summing substructure code

* Littbe bug

* Little updates to the merger tree reader

* Update .giignore

* Add box selection

* Add optional deletingf of a group

* add to keep track of changes

* Update changes

* Remove

* Add manual tracker

* Fix bug

* Add m200c_to_r200c

* Add manual halo tracking

* Remove skipped snapshots

* update cosmo params to match csiborg

* remove old comments

* Add SDSSxALFALFA

* Fix bugs

* Rename

* Edit paths

* Updates

* Add comments

* Add comment

* Add hour conversion

* Add imports

* Add new observation class

* Add selection

* Add imports

* Fix small bug

* Add field copying for safety

* Add matching to survey without masking

* Add P(k) calculation

* Add nb

* Edit comment

* Move files

* Remove merger import

* Edit setup.yp

* Fix typo

* Edit import warnigns

* update nb

* Update README

* Update README

* Update README

* Add skeleton

* Add skeleton
2023-12-07 14:23:32 +00:00
Richard Stiskalek
5500fbd2b9
Matching paper plots (#91)
* Fix calculations of expected mass

* Add paper plots

* Edits to pltos

* Add overlap summary

* Add imports

* Add import

* Add binned stat

* Add fit

* Add more plots

* Add basic env

* Add histogram mode

* Edit expected mass

* Improve expected plots

* Clean up plot

* Improve separation plot

* Update plots

* Edit expected calculation

* Update plotting

* Update plots

* Update plots

* Update plots

* Add conc fraction

* Add halo maker sorting

* Renaming

* Add import

* Add NaN treatment

* add import

* Move cosine smi

* Update plots

* Move similarity

* Fix little bugs

* Shorten documentation

* Update plots
2023-10-17 12:11:15 +01:00
rstiskalek
136c552369 Update dumping 2023-09-05 14:55:31 +01:00
rstiskalek
a63b51bef1 Edit pos 2023-09-05 14:14:28 +01:00
rstiskalek
8f3220bff7 Update dumping 2023-09-05 10:36:15 +01:00
rstiskalek
f135a69b40 Little bug 2023-09-04 14:27:14 +01:00
Richard Stiskalek
9ae93bed14
Add dumping to ASCII of halos (#89)
* Rename file

* Add argument

* Add ASCII positions paths

* Add halo positions dumping

* Update halo catalogues
2023-09-03 12:11:39 +01:00
Richard Stiskalek
eccd8e3507
Add galaxy sampling (#88)
* Improve calculations

* Improve flags

* Add smoothed options

* Remove some old comments

* Edit little things

* Save smoothed

* Move files

* Edit imports

* Edit imports

* Renaming imports

* Renaming imports

* Sort imports

* Sort files

* Sorting

* Optionally make copies of the field

* Add quijote backup check

* Add direct field smoothing

* Shorten stupid documentation

* Shorten stupid docs

* Update conversion

* Add particles to ASCII conversion

* Add a short comment

* Add SDSS uncorrected distance

* Adjust comment

* Add FITS index to galaxies

* Remove spare space

* Remove a stupid line

* Remove blank line

* Make space separated

* Add interpolated field path

* Add field sampling

* Sort imports

* Return density in cells

* Clear out observer velocity

* Add 170817 sampling

* Fix normalization

* Update plot
2023-09-01 16:29:50 +01:00
Richard Stiskalek
0af925e26a
Minor code improvements (#87)
* Shorten docs

* Renames
2023-08-31 09:57:53 +01:00
Richard Stiskalek
ae92fd9b72
Velocity observer (#86)
* Continue if r200c not defined

* Remove smooth scale

* Remove smooth scale

* Edit Max Matching plot

* Add peculiar velocity

* Add Vobs calculation

* Edit docs

* Add Vobs plot

* Improve plotting

* Edit naming convention

* Make a note

* Add new cat options

* Update density field RSP calculation

* Update field 2 rsp

* Move functions and shorten documentation

* Improve transforms and comments

* Update docs

* Update imports

* Edit calculation

* Add docs

* Remove imports

* Add Quijote flags

* Edit documentation

* Shorten documentation

* Edit func calls

* Shorten

* Docs edits

* Edit docs

* Shorten docs

* Short docs edits

* Simplify docs a little bit

* Save plotting

* Update env
2023-08-30 23:27:20 +01:00
Richard Stiskalek
8e3127f4d9
New plots (#85)
* Update verbosity messages

* Update verbosity messags

* Update more verbosity flags

* Update the iterator settings

* Add basic plots

* Update verbosity flags

* Update arg parsre

* Update plots

* Remove some older code

* Fix some definitions

* Update plots

* Update plotting

* Update plots

* Add support functions

* Update nb

* Improve plots, move back to scripts

* Update plots

* pep8

* Add max overlap plot

* Add blank line

* Upload changes

* Update changes

* Add weighted stats

* Remove

* Add import

* Add Max's matching

* Edit submission

* Add paths to Max's matching

* Fix matching

* Edit submission

* Edit plot

* Add max overlap separation plot

* Add periodic distance

* Update overlap summaries

* Add nsim0 for Max matvhing

* Add Max's agreement plot

* Add Quijote for Max method

* Update ploitting

* Update name
2023-08-18 19:20:47 +01:00
rstiskalek
36f4177f6b Add some blank spaces 2023-08-08 11:48:31 +01:00
rstiskalek
7ef36c7ac0 Add mass to name 2023-08-08 11:46:56 +01:00
Richard Stiskalek
c7b600d0ad
Periodic neighbours (#84)
* Edit the HMF plot

* Add periodic dist 2 points

* Add boxsize to RVSSphere

* Add periodic distance

* Adding periodic distance

* Add imports

* Change arguments

* Update bounds

* Lower min number of particles

* Change kwargs

* Add paths overlap quijote

* Add some comments
2023-08-08 12:19:40 +02:00
Richard Stiskalek
f4a7cb0d16
Remove halo fitting. (#83)
* Rename file

* Remove old content

* Remove halo fit

* Completely remove fits

* Add utils here

* Account for renaming
2023-08-07 11:33:27 +02:00
rstiskalek
46848a86eb Edit docs 2023-07-31 20:23:56 +01:00
rstiskalek
f21abc28e7 Add lower and upper limits 2023-07-31 20:13:10 +01:00
Richard Stiskalek
344ff8e091
Fixing overlaps and halo definitions. (#80)
* Add imports

* Refactor code

* Rename fof velocities

* Clean up and add Quijote

* Edit docstrings

* Update submission script

* Fix bug

* Start loading fitted properties

* Edit docstrings

* Update fitting for new `halo`

* Update CM definition and R200c

* Tune the minimum number of particles

* Enforce crossing threshold & tune hypers

* Fix periodiity when calculating angmom

* Doc strings

* Relax checkip

* Minor edit

* Fix old kwarg bug

* Fix CSiBORG bounds

* Catch warnings!

* Add `mass_kind` and new boundaries
2023-07-31 16:13:21 +02:00
Richard Stiskalek
acb8d9571c
Update units to be consistent. (#78)
* Fix Quijote units

* Updates to units

* Fix how things are loaded

* Updating definitions & conventions

* Clear up how fiducial observers in quijote work

* Refactorize array manip

* Move function definition

* More code refactoring

* Remove unused argument

* Remove `convert_from_box`

* Make a note

* Converting particle units

* Add notes about units

* Remove box constants

* Add rho_crit0

* Fix spherical overdensity mass units

* Refactor more code

* Edit catalogue kwargs

* Edit the docstring

* Edit bounds

* Add new checks for empty array

* Remove unused import

* Remove old code

* Remove old function

* Update real 2 redshift

* Clear up the RSP conv

* Add comments

* Add some units
2023-07-28 21:07:28 +02:00
Richard Stiskalek
fb4b4edf19
Quijote snapshots support (#77)
* Renaming

* Edit docs

* Delete old function

* Add a blank space

* Rename particle reader

* Add comments

* Rename

* Rename

* edit get_snapshots

* More renaming

* Remove old correction

* Add import

* Add basics of the Quijote reader

* Add a blank space

* Fix paths

* Rename function

* Fix HID and path

* Add more FoF reading

* Move definition

* Adding arguments

* Renaming

* Add kwargs for backward comp

* FoF Quijote return only hids

* Add sorting of quijote

* Add path to CSiBORG ICs snapshot

* Add support for Quijote

* initmatch paths for quijote

* Add kwargs

* Fix blank lines

* Rename kwarg

* Remove unused import

* Remove hardcoded numbers

* Update for Quijote

* Do not store velocities in QUijote ICs

* Box units mass Quijote

* Fix typo

* Ensure particles are not right at the edge

* Add structfit paths for QUuijote

* Basic CSiBORG units

* Add more quijote halo reading

* Add Quijote fitting

* Docs changes

* Docs changes
2023-07-27 18:41:00 +02:00
Richard Stiskalek
e08c741fc8
Improving halo fits (#76)
* Add periodic distances

* Little corrections

* Fix little bug

* Modernise the script

* Small updates

* Remove clump

* Add new halo routines

* Fix weights

* Modernise the script

* Add check ups on convergence

* More convergence check ups

* Edit bounds

* Add default argument

* Update fit heuristic and NaNs

* Change maxiter

* Switch NFW minimization to log-sapce

* Remove print statement

* Turn convert_from_box abstract property required for all boxes.

* Move files

* Simplify script

* Improve the argument parser

* Remove optinal argument

* Improve argument parser

* Add a minimum concentration limit
2023-07-25 16:12:58 +02:00
Richard Stiskalek
eb8d070fff
CSiBORG FoF switch (#75)
* Add moving FoF membership files

* add FoF membership path

* Add notes where its PHEW

* Add FoF catalogue path

* Correct typo

* Add more functionalities

* Make work with halo IDs from FoF

* Edit print statement

* Fix copy bug

* copy

* Add FoF catalogue reading

* Clean up script

* Fix typo

* Little edits

* Fix naming convention

* Rename key

* Remove loading substructure particles

* Rename CSiBORG Cat

* Rename clumps cat

* Rename cat

* Remove misplaced import

* Switch to halos

* rm import

* structfit of only halos

* Add FoF halo reading

* Add a short comment

* Fix __getitem__ to work with int

* Fix problems

* Improve __getitem__

* Add more conversion

* Fix indexing

* Fix __getitem__ assertion

* Fix numbers

* Rename

* Fix verbosity flags

* Add full Quijote HMF option

* Add plot of Quijote only

* Add quijote full paths

* Fix the fit_init script

* Renam arg

* Update .gitignore

* add default argument name

* Change default verbosity flag

* Modernise script structure

* Fix dictionary

* Fix reading to include m200c

* Modernise script

* Add args
2023-07-24 14:10:21 +02:00
Richard Stiskalek
de7def61d5
New RSP density distinction (#72)
* Edit docs

* Fix kernel units

* Add NGP interpolation

* Add Vobs but not implemented

* Add BORG density option

* Add BORG mcmc path

* Organise imports

* Add new density field distinction
2023-06-26 20:41:07 +01:00
Richard Stiskalek
27e1c181a2
Moving environment to RS (#70)
* Drag several fields at once

* add env in RSP

* Add docstrings

* Make __main__

* Fix bug

* Fix plotting little bug
2023-06-18 11:42:21 +01:00