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Author SHA1 Message Date
Guilhem Lavaux
5cf7a94538 Moved subsampling to the loaders to be able to do online subsampling (only implemented for gadget and multidark so far, the other coming in...) 2013-02-25 12:29:09 -05:00
Guilhem Lavaux
ecb4479178 Merge branch 'master' of https://bitbucket.org/cosmicvoids/void_identification 2013-02-24 14:15:34 -05:00
Guilhem Lavaux
e0c2862d2c Added some velocity field stacking support 2013-02-24 14:15:21 -05:00
P.M. Sutter
7f020f15e5 large files now appear to be supported 2013-02-19 13:30:01 -06:00
Guilhem Lavaux
acd9329b06 Splitted 64 bits into two 32 bits as NetCDF does not support 64 bits integers for storage. (Warning not tested) 2013-02-19 14:19:07 -05:00
Guilhem Lavaux
6ca873989d Use long instead of int for multidark loader 2013-02-19 13:25:41 -05:00
Guilhem Lavaux
97f831fab7 Added missing sharp dependency 2013-02-19 12:09:13 -05:00
Guilhem Lavaux
e44d51442d Updated again cosmotoolbox 2013-02-19 11:30:03 -05:00
Guilhem Lavaux
e41c26a46c Imported latest snapshot of cosmotoolbox 2013-02-19 11:18:20 -05:00
Guilhem Lavaux
a53a757d5a Use the modern output of stackVoidsZero to determine the voids to extract 2013-02-19 11:17:27 -05:00
P.M. Sutter
dd68b1f91c harmonized subsample defition between generateMock and prepareCatalogs 2013-02-18 08:28:26 -06:00
P.M. Sutter
1a62f691ef removed the maxkeep criterion in subsampling 2013-02-18 07:11:27 -06:00
P.M. Sutter
3a12e32f2c scripts now report status even when running in background 2013-02-15 13:48:04 -06:00
P.M. Sutter
e13d5b6173 cleaned up sdss dr9 stacks 2013-02-15 13:42:06 -06:00
P.M. Sutter
646da06ef8 updated parameter files to work with new halo file convention 2013-02-15 13:10:09 -06:00
P.M. Sutter
152e062fc4 added prunevoids parameter file 2013-02-14 08:38:24 -06:00
P.M. Sutter
0b4644471a fixed combining stacks with zobov cuts 2013-02-11 19:29:50 -06:00
P.M. Sutter
ae6ebe986c added the new HOD parameters to config files 2013-02-11 14:18:39 -06:00
P.M. Sutter
ee87db1517 added ability to do many HOD runs easily 2013-02-11 14:17:39 -06:00
P.M. Sutter
85e05aa696 improved inertia calculation and now doing bootstrap errors 2013-02-11 13:35:24 -06:00
P.M. Sutter
8e1b94949d now also compute K-S statistic among different number functions while plotting 2013-02-11 08:56:20 -06:00
P.M. Sutter
168ef7a0d7 merged guilhem's and my updates 2013-02-09 14:12:40 -06:00
P.M. Sutter
950c6e810a start of shape measurement in void outputs; some improvements and bug fixes to AP analysis 2013-02-09 14:08:44 -06:00
Guilhem Lavaux
a6f33db5aa Convert km/s to Mpc/h for the centers of voids 2013-02-05 14:40:17 -06:00
Guilhem Lavaux
160753a7b0 Be more resilient to change of text format for centers 2013-01-29 16:19:25 -05:00
Guilhem Lavaux
01eedc1e70 Merge branch 'master' of https://bitbucket.org/cosmicvoids/void_identification 2013-01-29 15:10:15 -05:00
Guilhem Lavaux
2b807e26bd Added detection of the support for march=native (solve healpy building issue on old compilers) 2013-01-29 15:09:40 -05:00
Guilhem Lavaux
116cd950e3 Added support for regeneration (to finely test impact of peculiar velocities) 2013-01-29 14:02:00 -06:00
Guilhem Lavaux
f209b89565 Reactivated the density threshold test 2013-01-29 14:00:23 -06:00
Guilhem Lavaux
5fb3adfc89 Fixed potential memory corruption while loading particle information. Slightly reworked the source code 2013-01-29 13:59:25 -06:00
Guilhem Lavaux
9bd0cbbb88 Fixed regeneration step in generateMock. Fixed gadget loading (missing initialization for multiple files) 2013-01-29 13:58:12 -06:00
P.M. Sutter
2584645520 added new data type for inputs, more flexible handling of halo catalog file names 2013-01-24 05:24:18 -06:00
Guilhem Lavaux
64e226c786 Be compatible with older version of the parameter file (without is_observation) 2013-01-21 21:38:38 -05:00
Guilhem Lavaux
361ab5b617 Merge branch 'master' of ssh://bitbucket.org/cosmicvoids/void_identification 2013-01-19 12:17:02 -05:00
Guilhem Lavaux
9ce6b3f683 Recount the number of adjacencies, which is not fully preserved by the merging and can cause assertion failure in other software 2013-01-19 12:16:52 -05:00
Guilhem Lavaux
61bb0684cc Adjusted showSliceExact for new evolution of the file formats. Do proper translation/rescaling/rotation if requested 2013-01-19 12:16:04 -05:00
Guilhem Lavaux
da9f7ff4ad Reposition the particles according to ranges and not length/2 (as designed at the beginning) 2013-01-19 12:15:10 -05:00
Guilhem Lavaux
b410694f6a Added an assertion check to trouble shoot potential SEGV 2013-01-19 12:14:08 -05:00
P.M. Sutter
3cb739a6d2 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-01-18 09:56:57 -06:00
P.M. Sutter
ae9701e99c replaced void shape fitter with rudimentary moment of inertia calculation 2013-01-18 09:56:31 -06:00
P.M. Sutter
ea58ff2b83 made default profile bin size 'auto' 2013-01-17 09:31:13 -06:00
nhamaus
4338a08f44 fixed particle selection problem in generateMock 2013-01-17 15:10:25 +01:00
P.M. Sutter
481da6edd0 fixed bug in barycenter calculation 2013-01-16 14:06:36 -06:00
P.M. Sutter
82c021d478 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-01-16 14:05:19 -06:00
Guilhem Lavaux
537b7c1f43 Huge memory leak: simulations were not destroyed while loading 2013-01-08 03:57:05 -05:00
P.M. Sutter
a7cdb80704 added observation flag in info file; stack voids now shifts particles based on redshift of subsample 2012-12-23 16:38:54 -06:00
P.M. Sutter
d4febc6942 streamlined merger tree processing 2012-12-20 13:38:59 -06:00
P.M. Sutter
3c8d7b2fb2 significant speedups to void matching algorithm 2012-12-20 13:38:14 -06:00
P.M. Sutter
e9b2697bc7 fixed printout of subsampling 2012-12-19 08:11:43 -06:00
P.M. Sutter
3dd1281cc9 further improvements to void overlap stuff 2012-12-18 21:41:06 -06:00