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533 commits 13 branches 4 tags 29 MiB
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150 commits

Author SHA1 Message Date
P.M. Sutter
92585f56b8 many bug fixes and improvements to voidoverlap 2013-04-29 21:32:06 -05:00
P.M. Sutter
0515431958 clean up of prunevoids; outputs more variations of trimmed and cut catalogs 2013-04-29 21:31:47 -05:00
P.M. Sutter
01c5940293 bug fixes in voidOverlap, also now report ellipticities 2013-04-28 14:19:51 -05:00
P.M. Sutter
c81fd8913b now outputs mass into particle and halo files 2013-04-25 09:35:32 -05:00
Guilhem Lavaux
4f9fd340f0 Indicate at which point of the text stream is the failure 2013-04-15 08:49:42 -04:00
P.M. Sutter
96a96f9680 better pruning of bad voids 2013-04-11 09:50:32 -05:00
P.M. Sutter
870e611b6a Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-05 10:50:19 -05:00
Guilhem Lavaux
1a518dd8e5 Temporarily remove the OVERFLOW requirement in jozov2_io 2013-04-05 10:47:52 -05:00
P.M. Sutter
c999e9e235 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-04 17:11:43 -05:00
Guilhem Lavaux
96b0ba3154 Fixed erroneous handling of zones with exact same leakage value in jozov2. 2013-04-04 12:04:52 -05:00
Guilhem Lavaux
85546379cf Cleanup some development cruft and re-enable openmp clause in jozov2 2013-04-02 09:06:56 -05:00
Guilhem Lavaux
91a222a3c3 Re-Implemented jozov2 using priority_queues (far less complicated and maybe better performing) 2013-04-01 21:30:45 -05:00
P.M. Sutter
3a15a27955 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-01 21:11:06 -05:00
Guilhem Lavaux
9a63f289d7 Take a few shortcuts in jozov2 to speed up the computation of the largest voids. The output does not seem totally consistent though. 2013-04-01 23:36:32 +02:00
Guilhem Lavaux
0879abed75 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-01 23:34:19 +02:00
P.M. Sutter
69fdf9b669 pruneVoids now outputs a *complete* trimmed and untrimmed catalog, rather than just a centers_nocut_ file. centers_nocut_ is now removed and the untrimmed catalog has a prefix untrimmed_ 2013-04-01 13:03:07 -05:00
Guilhem Lavaux
3df580e03e Added more verbosity to track the evolution 2013-04-01 19:11:19 +02:00
P.M. Sutter
fef092df26 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-01 10:40:52 -05:00
Guilhem Lavaux
45c9d4d62a Temporarily disable new done_zones array 2013-04-01 10:25:15 -04:00
Guilhem Lavaux
d0901e6d95 Fixed zone lookup in jozov2 2013-04-01 10:15:11 -04:00
Guilhem Lavaux
33b32ea43d Correct memory cleanup. 2013-04-01 09:43:05 -04:00
Guilhem Lavaux
b555533fa3 Added openmp-ization of jozov2_watershed 2013-04-01 09:39:58 -04:00
Guilhem Lavaux
9b0e7e115e Splitted jozov2 into several files for better readability 2013-04-01 09:32:09 -04:00
Guilhem Lavaux
60e692a0cb Removed old unused code (jozov_persistent). Activated jozov2 cleaned implementation of jozov in C++. 2013-04-01 09:02:59 -04:00
P.M. Sutter
a2ad3cc4f2 whoops, inserted a bug 2013-03-31 22:32:36 -05:00
P.M. Sutter
2e832dd415 void overlap now gets barycenters from center_ file rather than barycenter_ file 2013-03-31 22:04:27 -05:00
P.M. Sutter
4cd7408a8a now switched to accepting only top-level voids; harmonized ancillary files (barycenters_, voidDesc_) to the output of centers_ 2013-03-31 22:03:22 -05:00
Guilhem Lavaux
6a15e59521 Sort and use the sorted zone property to change some if statements 2013-03-31 19:35:03 -04:00
Guilhem Lavaux
311ac50344 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-31 17:07:36 -04:00
Guilhem Lavaux
5a0f2383b3 Merge branch 'master' of ssh://bitbucket.org/cosmicvoids/void_identification 2013-03-31 17:01:47 -04:00
Guilhem Lavaux
af425f345d Better hubble constant decoding in SDF 2013-03-31 17:01:44 -04:00
Guilhem Lavaux
e494ab1116 Free sorter 2013-03-31 11:09:34 -04:00
Guilhem Lavaux
9b7a931db9 New C++ jozov. Preliminary work before rewrite of the watershed transform algorithm. 2013-03-31 11:08:57 -04:00
P.M. Sutter
151c605335 pruneVoids now cleans out non-leaf voids; adjusted stackVoidsZero launcher to accept custom stacks 2013-03-30 15:24:45 -05:00
P.M. Sutter
2bc3b3ef27 pruneVoids now (rather clumsily) loads tree information; rejects voids that are not leaf nodes 2013-03-28 20:37:28 -05:00
P.M. Sutter
8043742123 added script to compare stacks and radial profiles of matched voids 2013-03-23 11:50:17 -05:00
P.M. Sutter
cb2b0de143 reset to original multidark loading 2013-03-21 21:54:02 -05:00
P.M. Sutter
7c172d5642 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-20 07:19:34 -05:00
P.M. Sutter
c6a9a1c875 reconfigure multidark loader to work with sdf rescaling and shifts 2013-03-20 07:18:15 -05:00
Guilhem Lavaux
5cbf68e072 Added a check that the subsampling value is the adequate one. 2013-03-20 04:55:59 -04:00
Guilhem Lavaux
189fa22c6b Generate a graceful error message instead of a Segmentation Fault 2013-03-19 16:36:26 -04:00
Guilhem Lavaux
a0d5b17164 Have an output that is more informative. 2013-03-19 10:45:33 -04:00
Guilhem Lavaux
17546f2a1e Reenforce periodic boundaries (to deal with round-off error in float) 2013-03-19 10:00:25 -04:00
P.M. Sutter
b7ce099e9e Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-08 13:04:22 -06:00
Guilhem Lavaux
004e4e3097 Fixed Hubble constant computations to be returned in the correct variable. 2013-03-08 12:40:06 -06:00
P.M. Sutter
5746e76d46 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-07 10:44:11 -06:00
P.M. Sutter
938df0cbb1 added a temporary debug printout to check the parent/child status of accepted voids 2013-03-07 10:43:52 -06:00
Guilhem Lavaux
5ad0bed91c If preReShift is specified, also moves back particles to Z=0 in the case of no light cone transformation 2013-03-07 09:34:31 -06:00
Guilhem Lavaux
39d10fdd6b Enforce particles to be in the boxsize for the SDF loader 2013-03-07 09:33:21 -06:00
Guilhem Lavaux
b8fa109008 Fixed position scaling in SDF 2013-03-06 00:59:28 +01:00