Commit graph

533 commits

Author SHA1 Message Date
P.M. Sutter
92585f56b8 many bug fixes and improvements to voidoverlap 2013-04-29 21:32:06 -05:00
P.M. Sutter
0515431958 clean up of prunevoids; outputs more variations of trimmed and cut catalogs 2013-04-29 21:31:47 -05:00
P.M. Sutter
9c26996591 passing ellipticity file to voidOverlap 2013-04-28 14:20:19 -05:00
P.M. Sutter
01c5940293 bug fixes in voidOverlap, also now report ellipticities 2013-04-28 14:19:51 -05:00
P.M. Sutter
0cc5529b08 checking for periodicity now pushed to function 2013-04-25 18:13:24 -05:00
P.M. Sutter
c088a87809 allow multiple stacks/slices for AP analysis within a redshift bin 2013-04-25 11:05:12 -05:00
P.M. Sutter
c81fd8913b now outputs mass into particle and halo files 2013-04-25 09:35:32 -05:00
P.M. Sutter
7c6463ff8d whoops, typed the variable name wrong 2013-04-23 07:42:23 -05:00
P.M. Sutter
b1252d8403 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-23 07:40:37 -05:00
P.M. Sutter
76197f1196 prepareCatalogs now checks to see if subsampling is desired before actually subsampling... 2013-04-23 07:40:15 -05:00
Guilhem Lavaux
4f9fd340f0 Indicate at which point of the text stream is the failure 2013-04-15 08:49:42 -04:00
P.M. Sutter
bf39356027 update to example mergertree512 pipeline script 2013-04-11 09:54:49 -05:00
P.M. Sutter
a04bf89265 multiple improvement to cross-comparison analysis 2013-04-11 09:54:14 -05:00
P.M. Sutter
f17e2dbdc8 plotting now defaults to the untrimmed catalog 2013-04-11 09:53:36 -05:00
P.M. Sutter
dbc4c87c3e removed a few extraneous checks in launchers 2013-04-11 09:53:01 -05:00
P.M. Sutter
a343938049 removed long output from profile building 2013-04-11 09:52:17 -05:00
P.M. Sutter
513a0c2dea more informative output when walking tree 2013-04-11 09:51:14 -05:00
P.M. Sutter
96a96f9680 better pruning of bad voids 2013-04-11 09:50:32 -05:00
P.M. Sutter
765b39ac63 more informative pipeline defaults.py file to describe how to handle particle files; option to do relative or absolute subsampling 2013-04-11 09:50:04 -05:00
P.M. Sutter
c51d324bc0 slightly more informative pipeline headers 2013-04-06 21:46:29 -05:00
P.M. Sutter
fa6826f8f5 fixed a small logic bug 2013-04-06 21:39:26 -05:00
P.M. Sutter
2c2426f662 prepareCatalogs now first loads a parameter file full of defaults 2013-04-06 21:39:08 -05:00
P.M. Sutter
870e611b6a Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-05 10:50:19 -05:00
Guilhem Lavaux
1a518dd8e5 Temporarily remove the OVERFLOW requirement in jozov2_io 2013-04-05 10:47:52 -05:00
P.M. Sutter
c999e9e235 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-04 17:11:43 -05:00
P.M. Sutter
dcd4733236 updated plotting routine to optionally show the scatter bounding many runs 2013-04-04 16:15:28 -05:00
Guilhem Lavaux
96b0ba3154 Fixed erroneous handling of zones with exact same leakage value in jozov2. 2013-04-04 12:04:52 -05:00
P.M. Sutter
f3408eea10 mask application now supports multiple rotations of the same data set to maximize reusability 2013-04-03 21:29:13 -05:00
P.M. Sutter
660d23a022 re-organized checks for ID list in stackVoidsZero to save computation time; cleaned up output 2013-04-03 20:47:08 -05:00
Guilhem Lavaux
85546379cf Cleanup some development cruft and re-enable openmp clause in jozov2 2013-04-02 09:06:56 -05:00
Guilhem Lavaux
5c40a6c226 Allow for a particle duplicate in voztie if and only if the adjacencies are strictly equal. 2013-04-02 09:06:23 -05:00
Guilhem Lavaux
91a222a3c3 Re-Implemented jozov2 using priority_queues (far less complicated and maybe better performing) 2013-04-01 21:30:45 -05:00
P.M. Sutter
3a15a27955 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-01 21:11:06 -05:00
P.M. Sutter
a1a062c50f skipped the barycenter computation entirely if it's been precomputed 2013-04-01 20:01:08 -05:00
Guilhem Lavaux
9a63f289d7 Take a few shortcuts in jozov2 to speed up the computation of the largest voids. The output does not seem totally consistent though. 2013-04-01 23:36:32 +02:00
Guilhem Lavaux
0879abed75 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-01 23:34:19 +02:00
P.M. Sutter
3b7b1dd4d2 void overlap analysis now uses untrimmed catalog by default 2013-04-01 13:04:40 -05:00
P.M. Sutter
69fdf9b669 pruneVoids now outputs a *complete* trimmed and untrimmed catalog, rather than just a centers_nocut_ file. centers_nocut_ is now removed and the untrimmed catalog has a prefix untrimmed_ 2013-04-01 13:03:07 -05:00
Guilhem Lavaux
3df580e03e Added more verbosity to track the evolution 2013-04-01 19:11:19 +02:00
P.M. Sutter
fef092df26 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-01 10:40:52 -05:00
P.M. Sutter
afd6e75ef3 better example configuration file 2013-04-01 10:40:30 -05:00
Guilhem Lavaux
45c9d4d62a Temporarily disable new done_zones array 2013-04-01 10:25:15 -04:00
Guilhem Lavaux
d0901e6d95 Fixed zone lookup in jozov2 2013-04-01 10:15:11 -04:00
Guilhem Lavaux
33b32ea43d Correct memory cleanup. 2013-04-01 09:43:05 -04:00
Guilhem Lavaux
b555533fa3 Added openmp-ization of jozov2_watershed 2013-04-01 09:39:58 -04:00
Guilhem Lavaux
9b0e7e115e Splitted jozov2 into several files for better readability 2013-04-01 09:32:09 -04:00
Guilhem Lavaux
60e692a0cb Removed old unused code (jozov_persistent). Activated jozov2 cleaned implementation of jozov in C++. 2013-04-01 09:02:59 -04:00
P.M. Sutter
a2ad3cc4f2 whoops, inserted a bug 2013-03-31 22:32:36 -05:00
P.M. Sutter
2e832dd415 void overlap now gets barycenters from center_ file rather than barycenter_ file 2013-03-31 22:04:27 -05:00
P.M. Sutter
4cd7408a8a now switched to accepting only top-level voids; harmonized ancillary files (barycenters_, voidDesc_) to the output of centers_ 2013-03-31 22:03:22 -05:00