Richard Stiskalek
35ccfb5c67
New matches ( #69 )
...
* Remove old file
* Add velocity plotting
* add smooth scale
* Fix bug
* Improve paths
* Edit plotting
* Add smoothed density
* Update boundaries
* Add basics
* Further docs
* Remove blank
* Better catalog broadcasting
* Update high res size
* Update plotting routines
* Update routine
* Update plotting
* Fix field saving name
* Add better colormap for environemnt
2023-06-17 19:52:26 +01:00
Richard Stiskalek
ccbbbd24b4
Add better diagnostics & plotting ( #67 )
...
* Add caching functions
* Add limts
* Add new mass runs
* Update .gitignore
* Edit which CDFs are loaded
* Stop saving cross hindxs
* Change dist to half precision
* New nearest path
* Add neighbour counting
* Add neighbour kwargs
* Update work in progress
* Add new counting
* Add how dist is built
* Collect dist to 1 file
* Update reading routine
* Delete Quijote files
* Remove file
* Back to float32
* Fix bugs
* Rename utils
* Remove neighbuor kwargs
* Rename file
* Fix bug
* Rename plt utils
* Change where nghb kwargs from
* line length
* Remove old notebooks
* Move survey
* Add white space
* Update TODO
* Update CDF calculation
* Update temporarily plotting
* Merge branch 'add_diagnostics' of github.com:Richard-Sti/csiborgtools into add_diagnostics
* Start adding documentation to plotting
* Remove comments
* Better code documentation
* Some work on tidal tensor
* Better plotting
* Add comment
* Remove nb
* Remove comment
* Add documentation
* Update plotting
* Update submission
* Update KL vs KS plots
* Update the plotting routine
* Update plotting
* Update plotting routines
2023-06-16 14:33:27 +01:00
Richard Stiskalek
2185846e90
CDF for nearest neighbour ( #63 )
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* Updat ebounds
* fix mistake
* add plot script
* fix which sims
* Add Poisson
* Just docs
* Hide things to __main__
* Rename paths
* Move old script
* Remove radpos
* Paths renaming
* Paths renaming
* Remove trunk stuff
* Add import
* Add nearest neighbour search
* Add Quijote fiducial indices
* Add final snapshot matching
* Add fiducial observer selection
* add boxsizes
* Add reading functions
* Little stuff
* Bring back the fiducial observer
* Add arguments
* Add quijote paths
* Add notes
* Get this running
* Add yaml
* Remove Poisson stuff
* Get the 2PCF script running
* Add not finished htings
* Remove comment
* Verbosity only on 0th rank!
* Update plotting style
* Add nearest neighbour CDF
* Save radial distance too
* Add centres
* Add basic plotting
2023-05-21 22:46:28 +01:00
rstiskalek
ab8199be2c
Rename folder
2023-05-08 14:24:15 +01:00
Richard Stiskalek
f48eb6dcb0
Dump radial profile information ( #48 )
...
* add radial position path
* pep8
* Add basic fit profile dumping
* pep8
* pep8
* pep8
* pep8
* pep8
* pep8
* Update TODO
* Fix parts is None bug
* Update nb
2023-04-27 00:18:30 +01:00
Richard Stiskalek
2e99b901ac
Environmental properties ( #20 )
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* rm get_positions
* Add comment
* add halfwidth func
* Update docs
* Add imprt
* Evaluate multiple fields simulatenously
* add halfwidth selection
* Change order of grav field and tensor field
* Add gravitational field norm
* Add eigenvalue calculation
* Sorted eigenvalues
* add init script
* add progress
* Add surveys
* Add more survey flexibility
* Minor changes
* add survey names
* rm name
* Fix list bug
* Fig bugs when running the script
* add phi to dtype
* fix dump bug
* Add comment
* Add smoothing options
* Add further comment
* Update TODO
2022-12-31 17:46:05 +00:00
Richard Stiskalek
1bb4255874
SDSS galaxies and catalogs rework ( #15 )
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* add SDSS skeleton
* rm nb
* update gitignore
* add docs
* add survey volume
* add masking
* add SDSS mask
* add SDSS comments
* add reference
* rm
* move planck to fits clusters
* Rm comment
* update masking routines
* rm masks
* Update docs
* rm data
* make MCXC fits surv
* change MCXC name
* Move to extrasapce
* Update paths
2022-12-05 11:36:41 +00:00
Richard Stiskalek
c748c87e45
New filesystem, basic neighbours calculation ( #10 )
...
* simplify Planck catalogue
* add MCXC and base survey
* Add 2MPP classes
* move match to MCXC to Planck
* add halo catalogue
* rm comment
* rm unused imports
* Move conversion to box
* add min mass
* Run on all simulations
* rm old function
* add combined catalogue
* add halo positions
* add knn neighbors
* set to 5 sims for testing
* add docstring
* Switch to neighbours in a catalogue
* rename io to read
* fix indentation
* rename to read
* io -> read
* add import
* add RealisationMatcher
* io -> read
* add docstrings
* add search_sim_indiices
* update todo
* keep make_cat at 10 for now
* update nb
2022-11-22 10:00:01 +00:00
rstiskalek
3352b06c1c
add units
2022-11-20 14:11:25 +00:00
Richard Stiskalek
17badf2652
X-ray data ( #9 )
...
* add xray reading
* add import
* add more comments
* add data
* add nb
* add MCXC shortcut
* add match indxs to Planck of MCXC
* add import
* update TODO
* update readme
* add famous clusters
* add 2mpp_groups
* shorten paths
* add 2M++ groups
* add import
* Update TODO
2022-11-10 07:40:44 +00:00
rstiskalek
d69012424e
simplify loading
2022-11-06 20:55:49 +00:00
Richard Stiskalek
d32eb5c134
Data loading shortcut ( #7 )
...
* add load_processed
* update TODO
2022-11-06 10:26:24 +00:00
Richard Stiskalek
8a56c22813
Within halo work and NFW fit ( #4 )
...
* add listing of snapshots
* change distance to comoving
* ignore cp files
* rename nb
* add str to list
* add NFW profile shapes
* add fits imports
* Rename to Nsnap
* in clumps_read only select props
* make clumpid int
* expand doc
* add import
* edit readme
* distribute halos
* add profile & posterior
* add import
* add import
* add documentation
* add rvs and init guess
* update todo
* update nb
* add file
* return end index too
* change clump_ids format to int32
* skeleton of dump particle
* update nb
* add func to drop 0 clump indxs parts
* add import
* add halo dump
* switch to float32
* Update TODO
* update TODO
* add func that loads a split
* add halo object
* Rename to clump
* make post work with a clump
* add optimiser
* add Nsplits
* ignore submission scripts
* ignore .out
* add dumppath
* add job splitting
* add split halos script
* rename file
* renaem files
* rm file
* rename imports
* edit desc
* add pick clump
* add number of particles
* update TODO
* update todo
* add script
* add dumping
* change dumpdir structure
* change dumpdir
* add import
* Remove tqdm
* Increase the number of splits
* rm shuffle option
* Change to remove split
* add emojis
* fix part counts in splits
* change num of splits
* rm with particle cut
* keep splits
* fit only if 10 part and more
* add min distance
* rm warning about not set vels
* update TODO
* calculate rho0 too
* add results collection
* add import
* add func to combine splits
* update TODO
* add extract cols
* update nb
* update TODO
2022-10-30 20:16:56 +00:00
rstiskalek
a47847cb7c
more renaming
2022-10-20 23:37:33 +01:00
Richard Stiskalek
942c36b142
Box units conversion ( #3 )
...
* linting
* fix long line
* rename nb
* rename import
* add group catalog
* move imports out of functions
* add array_to_structured
* add references
* fix subsampling
* fix coord bug
* add 2M++ dists
* save nb
* fix comment
* add snapshot path
* add snapshot path
* add read_info
* Move transforms
* add import radec
* expand docs
* Move flipcols
* update nb
* add flip_cols
* create file
* add blank line
* Move units transfs
* add blank line
* add units import
* rm imports
* add import
* add box_units
* add comments
2022-10-20 23:28:44 +01:00
Richard Stiskalek
53a0629d90
Basic matching ( #2 )
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* add recarray manipulations
* add cart to radec
* add behav so x can be a list
* add import
* create empty files
* ignore plots file
* add planck data
* add read_mmain file
* add cols_to_structured import
* use cols_to_structured
* add cols_to_structued
* add read_mmain import
* add reading planck
* add mass conversion
* add brute force separation calculation
* update nb
* rename & int dtype
* add func to get csiborg ids
* add list to nd array conversion
* add utils
* rename file
* add 2M++
* add read 2mpp
* add 2mpp shortcut
* add randoms generator
* Change range of RA [0, 360]
* fix ang wrapping
* add code for sphere 2pcf
* rm wrapping
* optionally load only a few borgs
* update nb
2022-10-18 19:41:20 +01:00
