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Author	SHA1	Message	Date
P.M. Sutter	a5f88a8b3c	void overlap analysis appears to work	2012-12-12 10:26:12 -06:00
P.M. Sutter	0b9673b24b	putting fabs in right spot in prunevoids	2012-12-10 21:01:25 -06:00
P.M. Sutter	6a7f507843	switch abs to fabs in pruneVoids	2012-12-10 20:03:51 -06:00
P.M. Sutter	5f1e6a63cf	starting to work in merger tree analysis	2012-12-10 12:17:22 -06:00
P.M. Sutter	b20ed47367	fix to uniqueID for catalog data	2012-12-09 21:51:46 -06:00
P.M. Sutter	dee217babf	better handing of HOD	2012-12-09 20:26:54 -06:00
P.M. Sutter	2cdfce6cbf	more flexible handling of masking data sets	2012-12-07 22:57:07 -06:00
P.M. Sutter	6e18299ade	another attempt at making the jobSuccessful call work; some other minor fixes	2012-12-07 08:11:28 -06:00
P.M. Sutter	f155564d6d	fix to halo catalog handling	2012-12-04 21:21:30 -06:00
P.M. Sutter	3cb2a990da	halo catalog file format now handled correctly	2012-12-03 11:09:53 -06:00
P.M. Sutter	2c3fe1b35d	fixed support for masked mock data sets; now skips over comments in halo catalogs	2012-12-03 11:00:51 -06:00
P.M. Sutter	f3f96b0dcd	masking of mock catalogs now works	2012-12-02 13:08:20 -06:00
P.M. Sutter	7484bebbfa	HOD now more general; can support LANL halo catalog files	2012-12-01 16:37:40 -06:00
P.M. Sutter	fec23b5c4f	cleaned up the prepare catalog script to support more general halo files	2012-12-01 08:46:50 -06:00
P.M. Sutter	c781c5ee50	applyMaskToMock now accepts build path	2012-12-01 08:21:33 -06:00
Guilhem Lavaux	082bfde711	Moved the script to its final place. Sigh...	2012-11-30 09:48:12 -05:00
Guilhem Lavaux	14d7e44572	Merge branch 'master' of ssh://bitbucket.org/cosmicvoids/void_identification	2012-11-30 09:46:18 -05:00
Guilhem Lavaux	60d8f31877	Moved prepareCatalogs.in.py to pipeline_source	2012-11-30 09:46:09 -05:00
P.M. Sutter	38a0e93ede	more general halo catalogs now supported	2012-11-30 08:32:13 -06:00
P.M. Sutter	da7ed979c5	utility to retrieve the multidark catalog	2012-11-30 07:55:20 -06:00
P.M. Sutter	b77f4f4e9e	uniqueID now enabled for multidark	2012-11-30 07:53:41 -06:00
Guilhem Lavaux	4c5159823a	Removed cubic, Use cube from CosmoTool	2012-11-30 07:39:11 -05:00
Guilhem Lavaux	5783109225	Merge branch 'master' of https://bitbucket.org/cosmicvoids/void_identification	2012-11-30 07:36:00 -05:00
P.M. Sutter	ba2abd1bd6	fixed merge	2012-11-29 11:22:15 -06:00
P.M. Sutter	022eec19bb	some bug fixes to the a-p analysis scripts; fixed major bug in prunevoids; updated catalog release scripts	2012-11-29 11:14:59 -06:00
Guilhem Lavaux	d29f92529b	Moved simulation loaders into their own subdirectory.	2012-11-25 10:23:31 -05:00
Guilhem Lavaux	28edc7ce3d	Enforce NetCDF4 file format in loadArray/saveArray functions	2012-11-24 17:53:22 -05:00
Guilhem Lavaux	9f554e10ed	Use NetCDF4 file format for support for large variables	2012-11-24 17:27:12 -05:00
Guilhem Lavaux	602dc86be5	Re-added Flash. Splitted loaders into their own static library	2012-11-24 09:44:48 -06:00
Guilhem Lavaux	6fbf034768	Re-added ramses loader, multidark loader	2012-11-24 09:40:58 -06:00
Guilhem Lavaux	1a190a6be0	Added back Ramses loader	2012-11-23 14:42:57 -06:00
Guilhem Lavaux	745b073ed6	GenerateMock working with Gadget snapshots	2012-11-23 14:31:46 -06:00
Guilhem Lavaux	748f2c7107	Fixed scaling of boxsize to account for different units	2012-11-23 14:04:44 -05:00
Guilhem Lavaux	5573b82c44	Initialize variables in SimulationLoader	2012-11-23 14:01:09 -05:00
Guilhem Lavaux	91926434a4	Be more verbose	2012-11-23 13:57:00 -05:00
Guilhem Lavaux	cc28abc14d	Fixed detection of number of files in Gadget loader	2012-11-23 13:54:42 -05:00
Guilhem Lavaux	529024c5ab	Added missing loaders	2012-11-23 13:50:52 -05:00
Guilhem Lavaux	b3ee63de56	Moving toward true multi-file handling	2012-11-23 13:49:44 -05:00
Guilhem Lavaux	a4cb64e6c4	Fixed memory bugs in generateMock	2012-11-22 12:16:35 -06:00
Guilhem Lavaux	26f6864f47	Large rework of generateMock for handling partial load of snapshots and thus larger simulations. Work not yet complete.	2012-11-22 10:51:50 -05:00
Guilhem Lavaux	60d77d3ae0	Redirect using &> and not >&	2012-11-21 10:17:57 -05:00
Guilhem Lavaux	53bfb786cb	Fix HDF5 URL	2012-11-21 09:59:24 -05:00
Guilhem Lavaux	2889058a74	Fix handling of parameters	2012-11-21 08:36:39 -06:00
Guilhem Lavaux	2696ad20d1	Fixed SEGV in case the underlying simulation data does not support uniqueID	2012-11-20 19:21:21 -06:00
Guilhem Lavaux	7f8f0441b0	Have CMake adjust the tool path in prepareCatalogs.in.py	2012-11-20 17:56:13 -06:00
Guilhem Lavaux	72cd279b25	Use attribute infrastructure to pass uniqueID tag.	2012-11-20 17:16:45 -05:00
Guilhem Lavaux	fe62b7ef8d	Imported attribute support from latest CosmoTool	2012-11-20 17:07:55 -05:00
Guilhem Lavaux	a91851de76	Merge	2012-11-20 17:06:20 -05:00
Guilhem Lavaux	7d90960783	Added support for unordered particle id	2012-11-20 10:05:24 -05:00
Guilhem Lavaux	03782c8843	Emit the particle id and not its rank. At the moment the two are equivalent but will change.	2012-11-20 09:56:24 -05:00