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Author SHA1 Message Date
Guilhem Lavaux
9b8ce57a97 Imported code for flexible gadget units. Imported load ramses code. Always invoke metricTransform. Add the option to import box parameters from an already existing mock catalog 2012-11-08 10:00:08 -05:00
P.M. Sutter
053c46e57b fix to allow switching on/off cosmological distortions 2012-11-07 11:51:51 -06:00
P.M. Sutter
83073ecf20 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2012-11-07 09:27:32 -06:00
P.M. Sutter
de5a7cb354 fix to have separate file name and redshift lists in script generation 2012-11-07 09:27:11 -06:00
Guilhem Lavaux
058b12bb3f healpy setup.py also needs to know where cfitsio is located 2012-11-06 15:56:03 -05:00
Guilhem Lavaux
a59b9aae84 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2012-11-06 15:42:18 -05:00
Guilhem Lavaux
15f03654d7 Check if python < 2.7, and build argparse if necessary 2012-11-06 15:42:11 -05:00
P.M. Sutter
8c6add3311 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2012-11-06 14:41:36 -06:00
P.M. Sutter
61acd59383 futher fixes for handling sub-volumes in analysis 2012-11-06 14:41:09 -06:00
Guilhem Lavaux
0f53c385b8 Cleaned up shown variables by marking most URLs as 'advanced variables' 2012-11-06 15:36:15 -05:00
Guilhem Lavaux
200f6de44e Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2012-11-06 13:26:11 -05:00
Guilhem Lavaux
c9d3a5540e Added argparse/setuptools. It is temporarily set to always on while I figure a way of detection python version 2012-11-06 13:25:25 -05:00
nhamaus
4764b42a63 changed baseResolution to float 2012-11-06 17:25:29 +01:00
Guilhem Lavaux
0e2f551f7a Added Healpy to the dependencies to build 2012-11-06 10:58:16 -05:00
P.M. Sutter
e2ee7b22dd removed periodic boundary handing in stacking, since we may be dealing with subsections 2012-11-06 08:01:08 -06:00
Guilhem Lavaux
da189a653b Removed spurious NetCDFFile import 2012-11-05 19:26:03 -05:00
Guilhem Lavaux
de9797d6df Merge branch 'master' of https://bitbucket.org/cosmicvoids/void_identification 2012-11-05 17:30:52 -05:00
Guilhem Lavaux
d6d71174de Enforce the location where python libraries are installed (/lib and not /lib64 or some other random directory) 2012-11-05 16:30:18 -06:00
Guilhem Lavaux
ffb41cc94a Enforces /lib/ (anot /lib64/ or something else) for dependencies 2012-11-05 16:13:44 -06:00
Guilhem Lavaux
bc9ea4aca3 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2012-11-05 15:36:51 -06:00
Guilhem Lavaux
f1b1ff8552 Old cruft 2012-11-05 15:36:45 -06:00
Guilhem Lavaux
c4a157289b Removed generated cython file 2012-11-05 13:35:51 -05:00
Guilhem Lavaux
41a8f75084 Use PYTHON_LOCAL_SITE_PACKAGE variable and not PYTHONPATH while invoking python*.cmake scripts 2012-11-05 09:57:18 -05:00
Guilhem Lavaux
2a452cd98c Made Cairo optional. drawVoids is not built if Cairo is not found. 2012-11-02 11:35:09 -04:00
P.M. Sutter
21431f9a31 added a-p analysis script to repo; some minor bug fixes to adjust tools to work with simulation data 2012-11-02 08:19:23 -05:00
Guilhem Lavaux
fb98f89679 Properly build and install the python tools in BINDIR/ext_build/python. Specify more dependencies. 2012-11-01 22:16:13 -04:00
Guilhem Lavaux
a1b3fa7290 Added another script to setup the environment prior to run a given executable 2012-11-01 21:30:44 -04:00
Guilhem Lavaux
25f2244d49 Improved handling of openmp flags using set_target_properties 2012-11-01 21:28:38 -04:00
Guilhem Lavaux
de6dbd3051 Re-formatted README files for screens with limited number of characters per line. :-) 2012-11-01 17:42:39 -04:00
Guilhem Lavaux
03c7aadc13 Generate a shell script that sets the correct environment for python 2012-11-01 17:38:00 -04:00
Guilhem Lavaux
e91ac15004 Generate a shell script that sets the correct environment for python 2012-11-01 17:37:56 -04:00
Guilhem Lavaux
430d938401 Added pic option to hdf5 and netcdf build. Fixed return variable in python build script. 2012-11-01 17:20:30 -04:00
Guilhem Lavaux
f7ffe20b69 Fixed cmake scripts to run python build/install. New script to run python scripts. 2012-11-01 17:03:25 -04:00
Guilhem Lavaux
cd229df01f Added another visualization tool for slices of voids 2012-11-01 13:51:51 -04:00
P.M. Sutter
d9a24a304e added README and cleaned up prepareGadgetCatalog script 2012-11-01 08:39:21 -05:00
Guilhem Lavaux
d18fbdf10b Ported python code to netCDF4 package (support most recent netcdf4 on-disk fornat) 2012-10-31 15:00:43 -04:00
Guilhem Lavaux
e380538e66 Cleanup coding style 2012-10-31 14:51:59 -04:00
Guilhem Lavaux
eaa35ea07e Build python dependencies: Python, NetCDF4 2012-10-31 14:50:41 -04:00
Guilhem Lavaux
e1f3731682 Removed spurious python cache files 2012-10-31 14:05:05 -04:00
Guilhem Lavaux
a44389204e Merge branch 'master' of ssh://bitbucket.org/cosmicvoids/void_identification 2012-10-31 12:34:03 -04:00
P.M. Sutter
14abbc2018 Slight re-organization of C/C++ tools. Significant modifications to support observational data. Python and pipeline scripts added 2012-10-31 10:43:15 -05:00
Guilhem Lavaux
fefa551e8d Build the external project in a separate sub-directory. 2012-10-31 11:14:03 -04:00
Guilhem Lavaux
15496df4ff Added zobov to the list of subdirs. Fixed include path voz1b1 vozinit and vozutil 2012-10-31 08:47:34 -04:00
Guilhem Lavaux
a5968daf01 Download and build QHull. Fixed path in qhull c++ includes. 2012-10-30 14:53:32 -04:00
Guilhem Lavaux
2e9a820d34 Removed FindHealpix as we have now an internal healpix package. Added gengetopt as a dependency to build. Fixed library broken linkage. 2012-10-30 14:38:41 -04:00
Guilhem Lavaux
51f6798f88 Imported Healpix, cfitsio, cosmotool. Added cmake tool to build dependencies (cfitsio, hdf5, netcdf, boost, healpix, gsl, ..). Adjusted CMakeLists.txt 2012-10-30 14:17:11 -04:00
Guilhem Lavaux
4bfb62f177 Imported healpix tree 2012-10-30 13:56:48 -04:00
Guilhem Lavaux
4182c30485 Moved source codes into new subdirectories to make the organization cleaner. Created new CMakeLists accordingly. 2012-10-30 13:55:29 -04:00
Guilhem Lavaux
f6fae36329 Renamed directory mytools to pipeline_tools 2012-10-30 11:54:42 -04:00
Guilhem Lavaux
b5ee1cc7a6 Adjusted top-level CMakeLists.txt 2012-10-29 11:37:42 -04:00