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Author SHA1 Message Date
P.M. Sutter
3cb2a990da halo catalog file format now handled correctly 2012-12-03 11:09:53 -06:00
P.M. Sutter
2c3fe1b35d fixed support for masked mock data sets; now skips over comments in halo catalogs 2012-12-03 11:00:51 -06:00
P.M. Sutter
f3f96b0dcd masking of mock catalogs now works 2012-12-02 13:08:20 -06:00
P.M. Sutter
7484bebbfa HOD now more general; can support LANL halo catalog files 2012-12-01 16:37:40 -06:00
P.M. Sutter
fec23b5c4f cleaned up the prepare catalog script to support more general halo files 2012-12-01 08:46:50 -06:00
P.M. Sutter
c781c5ee50 applyMaskToMock now accepts build path 2012-12-01 08:21:33 -06:00
Guilhem Lavaux
082bfde711 Moved the script to its final place. Sigh... 2012-11-30 09:48:12 -05:00
Guilhem Lavaux
14d7e44572 Merge branch 'master' of ssh://bitbucket.org/cosmicvoids/void_identification 2012-11-30 09:46:18 -05:00
Guilhem Lavaux
60d8f31877 Moved prepareCatalogs.in.py to pipeline_source 2012-11-30 09:46:09 -05:00
P.M. Sutter
38a0e93ede more general halo catalogs now supported 2012-11-30 08:32:13 -06:00
P.M. Sutter
da7ed979c5 utility to retrieve the multidark catalog 2012-11-30 07:55:20 -06:00
P.M. Sutter
b77f4f4e9e uniqueID now enabled for multidark 2012-11-30 07:53:41 -06:00
Guilhem Lavaux
4c5159823a Removed cubic, Use cube from CosmoTool 2012-11-30 07:39:11 -05:00
Guilhem Lavaux
5783109225 Merge branch 'master' of https://bitbucket.org/cosmicvoids/void_identification 2012-11-30 07:36:00 -05:00
P.M. Sutter
ba2abd1bd6 fixed merge 2012-11-29 11:22:15 -06:00
P.M. Sutter
022eec19bb some bug fixes to the a-p analysis scripts; fixed major bug in prunevoids; updated catalog release scripts 2012-11-29 11:14:59 -06:00
Guilhem Lavaux
d29f92529b Moved simulation loaders into their own subdirectory. 2012-11-25 10:23:31 -05:00
Guilhem Lavaux
28edc7ce3d Enforce NetCDF4 file format in loadArray/saveArray functions 2012-11-24 17:53:22 -05:00
Guilhem Lavaux
9f554e10ed Use NetCDF4 file format for support for large variables 2012-11-24 17:27:12 -05:00
Guilhem Lavaux
602dc86be5 Re-added Flash. Splitted loaders into their own static library 2012-11-24 09:44:48 -06:00
Guilhem Lavaux
6fbf034768 Re-added ramses loader, multidark loader 2012-11-24 09:40:58 -06:00
Guilhem Lavaux
1a190a6be0 Added back Ramses loader 2012-11-23 14:42:57 -06:00
Guilhem Lavaux
745b073ed6 GenerateMock working with Gadget snapshots 2012-11-23 14:31:46 -06:00
Guilhem Lavaux
748f2c7107 Fixed scaling of boxsize to account for different units 2012-11-23 14:04:44 -05:00
Guilhem Lavaux
5573b82c44 Initialize variables in SimulationLoader 2012-11-23 14:01:09 -05:00
Guilhem Lavaux
91926434a4 Be more verbose 2012-11-23 13:57:00 -05:00
Guilhem Lavaux
cc28abc14d Fixed detection of number of files in Gadget loader 2012-11-23 13:54:42 -05:00
Guilhem Lavaux
529024c5ab Added missing loaders 2012-11-23 13:50:52 -05:00
Guilhem Lavaux
b3ee63de56 Moving toward true multi-file handling 2012-11-23 13:49:44 -05:00
Guilhem Lavaux
a4cb64e6c4 Fixed memory bugs in generateMock 2012-11-22 12:16:35 -06:00
Guilhem Lavaux
26f6864f47 Large rework of generateMock for handling partial load of snapshots and thus larger simulations. Work not yet complete. 2012-11-22 10:51:50 -05:00
Guilhem Lavaux
60d77d3ae0 Redirect using &> and not >& 2012-11-21 10:17:57 -05:00
Guilhem Lavaux
53bfb786cb Fix HDF5 URL 2012-11-21 09:59:24 -05:00
Guilhem Lavaux
2889058a74 Fix handling of parameters 2012-11-21 08:36:39 -06:00
Guilhem Lavaux
2696ad20d1 Fixed SEGV in case the underlying simulation data does not support uniqueID 2012-11-20 19:21:21 -06:00
Guilhem Lavaux
7f8f0441b0 Have CMake adjust the tool path in prepareCatalogs.in.py 2012-11-20 17:56:13 -06:00
Guilhem Lavaux
72cd279b25 Use attribute infrastructure to pass uniqueID tag. 2012-11-20 17:16:45 -05:00
Guilhem Lavaux
fe62b7ef8d Imported attribute support from latest CosmoTool 2012-11-20 17:07:55 -05:00
Guilhem Lavaux
a91851de76 Merge 2012-11-20 17:06:20 -05:00
Guilhem Lavaux
7d90960783 Added support for unordered particle id 2012-11-20 10:05:24 -05:00
Guilhem Lavaux
03782c8843 Emit the particle id and not its rank. At the moment the two are equivalent but will change. 2012-11-20 09:56:24 -05:00
P.M. Sutter
06c8ddc26e more consistent handling of redshift bounaries in pruneVoids 2012-11-19 07:51:01 -06:00
P.M. Sutter
80c2b7f603 more bug fixes for the minimum halo mass cuts...sigh 2012-11-18 22:47:49 -06:00
Guilhem Lavaux
9e79c784f3 Merge 2012-11-18 21:57:36 -05:00
P.M. Sutter
9d97522472 more bug fixes 2012-11-18 18:09:18 -06:00
P.M. Sutter
0b54a31d0c many bug fixes from the previous update; new changes appear to work now 2012-11-18 14:23:50 -06:00
P.M. Sutter
90964d2be3 fixed bugs associated with saving RA and Dec 2012-11-17 13:01:39 -06:00
Paul Matt Sutter
10dfe29a26 Supports minimum halo mass cuts. Start of scripts to generate masked mock sets, some files added to later support more general preparation scripts 2012-11-17 13:00:54 -05:00
Paul Matt Sutter
a53e3bf290 reconfigured to put RA, Dec, redshift, and unique (catalog) ID in the binary ZOBOV file 2012-11-17 02:49:02 -05:00
P.M. Sutter
7c3d7a9d31 merged both mine and nico's fix 2012-11-16 09:59:21 -06:00