Commit Graph

11 Commits

Author SHA1 Message Date
Richard Stiskalek
2e99b901ac
Environmental properties (#20)
* rm get_positions

* Add comment

* add halfwidth func

* Update docs

* Add imprt

* Evaluate multiple fields simulatenously

* add halfwidth selection

* Change order of grav field and tensor field

* Add gravitational field norm

* Add eigenvalue calculation

* Sorted eigenvalues

* add init script

* add progress

* Add surveys

* Add more survey flexibility

* Minor changes

* add survey names

* rm name

* Fix list bug

* Fig bugs when running the script

* add phi to dtype

* fix dump bug

* Add comment

* Add smoothing options

* Add further comment

* Update TODO
2022-12-31 17:46:05 +00:00
Richard Stiskalek
1bb4255874
SDSS galaxies and catalogs rework (#15)
* add SDSS skeleton

* rm nb

* update gitignore

* add docs

* add survey volume

* add masking

* add SDSS mask

* add SDSS comments

* add reference

* rm

* move planck to fits clusters

* Rm comment

* update masking routines

* rm masks

* Update docs

* rm data

* make MCXC fits surv

* change MCXC name

* Move to extrasapce

* Update paths
2022-12-05 11:36:41 +00:00
Richard Stiskalek
c748c87e45
New filesystem, basic neighbours calculation (#10)
* simplify Planck catalogue

* add MCXC and base survey

* Add 2MPP classes

* move match to MCXC to Planck

* add halo catalogue

* rm comment

* rm unused imports

* Move conversion to box

* add min mass

* Run on all simulations

* rm old function

* add combined catalogue

* add halo positions

* add knn neighbors

* set to 5 sims for testing

* add docstring

* Switch to neighbours in a catalogue

* rename io to read

* fix indentation

* rename to read

* io -> read

* add import

* add RealisationMatcher

* io -> read

* add docstrings

* add search_sim_indiices

* update todo

* keep make_cat at 10 for now

* update nb
2022-11-22 10:00:01 +00:00
rstiskalek
3352b06c1c add units 2022-11-20 14:11:25 +00:00
Richard Stiskalek
17badf2652
X-ray data (#9)
* add xray reading

* add import

* add more comments

* add data

* add nb

* add MCXC shortcut

* add match indxs to Planck of MCXC

* add import

* update TODO

* update readme

* add famous clusters

* add 2mpp_groups

* shorten paths

* add 2M++ groups

* add import

* Update TODO
2022-11-10 07:40:44 +00:00
rstiskalek
d69012424e simplify loading 2022-11-06 20:55:49 +00:00
Richard Stiskalek
d32eb5c134
Data loading shortcut (#7)
* add load_processed

* update TODO
2022-11-06 10:26:24 +00:00
Richard Stiskalek
8a56c22813
Within halo work and NFW fit (#4)
* add listing of snapshots

* change distance to comoving

* ignore cp files

* rename nb

* add str to list

* add NFW profile shapes

* add fits imports

* Rename to Nsnap

* in clumps_read only select props

* make clumpid int

* expand doc

* add import

* edit readme

* distribute halos

* add profile & posterior

* add import

* add import

* add documentation

* add rvs and init guess

* update todo

* update nb

* add file

* return end index too

* change clump_ids format to int32

* skeleton of dump particle

* update nb

* add func to drop 0 clump indxs parts

* add import

* add halo dump

* switch to float32

* Update TODO

* update TODO

* add func that loads a split

* add halo object

* Rename to clump

* make post work with a clump

* add optimiser

* add Nsplits

* ignore submission scripts

* ignore .out

* add dumppath

* add job splitting

* add split halos script

* rename file

* renaem files

* rm file

* rename imports

* edit desc

* add pick clump

* add number of particles

* update TODO

* update todo

* add script

* add dumping

* change dumpdir structure

* change dumpdir

* add import

* Remove tqdm

* Increase the number of splits

* rm shuffle option

* Change to remove split

* add emojis

* fix part counts in splits

* change num of splits

* rm with particle cut

* keep splits

* fit only if 10 part and more

* add min distance

* rm warning about not set vels

* update TODO

* calculate rho0 too

* add results collection

* add import

* add func to combine splits

* update TODO

* add extract cols

* update nb

* update TODO
2022-10-30 20:16:56 +00:00
rstiskalek
a47847cb7c more renaming 2022-10-20 23:37:33 +01:00
Richard Stiskalek
942c36b142
Box units conversion (#3)
* linting

* fix long line

* rename nb

* rename import

* add group catalog

* move imports out of functions

* add array_to_structured

* add references

* fix subsampling

* fix coord bug

* add 2M++ dists

* save nb

* fix comment

* add snapshot path

* add snapshot path

* add read_info

* Move transforms

* add import radec

* expand docs

* Move flipcols

* update nb

* add flip_cols

* create file

* add blank line

* Move units transfs

* add blank line

* add units import

* rm imports

* add import

* add box_units

* add comments
2022-10-20 23:28:44 +01:00
Richard Stiskalek
53a0629d90
Basic matching (#2)
* add recarray manipulations

* add cart to radec

* add behav so x can be a list

* add import

* create empty files

* ignore plots file

* add planck data

* add read_mmain file

* add cols_to_structured import

* use cols_to_structured

* add cols_to_structued

* add read_mmain import

* add reading planck

* add mass conversion

* add brute force separation calculation

* update nb

* rename & int dtype

* add func to get csiborg ids

* add list to nd array conversion

* add utils

* rename file

* add 2M++

* add read 2mpp

* add 2mpp shortcut

* add randoms generator

* Change range of RA [0, 360]

* fix ang wrapping

* add code for sphere 2pcf

* rm wrapping

* optionally load only a few borgs

* update nb
2022-10-18 19:41:20 +01:00