Commit graph

896 commits

Author SHA1 Message Date
fcfad49e3c Fix the size of the array to be pushed to netcdf 2021-02-25 14:00:20 +02:00
affb56ff48 Merged in python3 (pull request #5)
Port to python3, large code cleanup

* Fixed command line for cosmotool

* Fix path

* Dump command line is log file

* Fix important typo

* Modify paths for example

* Fix path again

* Use an explicit constructor

* Change file to open (python 2->3)

* python3 fix for xrange in periodic_kdtree.py

* Fixed index for Np, numPart, numZones, numZonesTot, partID, zoneID in catalogUtil.py
2020-12-29 08:56:33 +00:00
Marie Aubert
8249256508 Merged in m_aubert/vide_public (pull request #3)
Bugfixes
2018-10-12 09:22:31 +00:00
Marie Aubert
6a5aa85f2f Implemented corrections from reviews 2018-10-12 11:11:49 +02:00
Marie Aubert
531a2c30f3 Uncommented previous part of the code making sure that upper redshift boundary of zRange is respected 2018-10-11 18:05:59 +02:00
Marie Aubert
7bf85c07c8 useComoving definition moved in the Sample instance to be correctly passed 2018-10-11 18:01:23 +02:00
Marie Aubert
3eb3a0cf5d useComoving passed to mock_sphere particles + modified lower redshift bound to be consistent with pruneVoids 2018-10-11 17:52:01 +02:00
Guilhem Lavaux
23c9a369ee Disable python extension in cosmotool for now as it is not required and cause trouble for Vide building scripts 2018-07-26 14:54:55 +02:00
e01ee80fbd Force creating the install directory of python packages. 2018-07-25 20:56:55 +03:00
b5e3086801 Provide the just-built cython to cosmotool. Forced to reorganize the order of the call to ExternalProject 2018-07-20 08:48:54 +03:00
63c7757662 Fix path 2018-07-19 15:24:57 +03:00
1c24744198 Add pyc as files to be ignored 2018-07-19 15:12:27 +03:00
81ada3d99a Skip setuptools installation if sufficienty recent 2018-07-19 15:11:49 +03:00
003bc39d4a Update cosmotool 2nd part 2018-07-19 15:11:23 +03:00
64e05fc180 Update cosmotool 2018-07-19 15:11:04 +03:00
Nico Hamaus
387dc4d853 Fixed indexing bug in catalogUtil 2017-11-24 18:19:42 +01:00
Guilhem Lavaux
a4cafc0341 Remove debug information 2017-11-24 11:20:49 +01:00
Guilhem Lavaux
b28cf64544 Update setuptools url. Fix memory initialization issue in jozov2 2017-11-23 13:19:49 +01:00
Guilhem Lavaux
bbbb8e279e Do not allocate if no adjacencies. 2017-10-11 09:33:18 +02:00
Guilhem Lavaux
54aa135ac6 Add more debug information to jozov2 output 2017-10-09 09:57:11 +02:00
Guilhem Lavaux
01e72e599b Update HDF5 url 2017-10-09 09:56:48 +02:00
Guilhem Lavaux
f053e751c3 Ensure cfitsio is built before healpy 2017-03-02 16:30:55 +01:00
Guilhem Lavaux
4e3b33948f Added SWIG in a requirements section 2017-03-02 10:27:45 +01:00
Guilhem Lavaux
fc0366e7fd Updated python package 2017-03-01 16:46:07 +01:00
Guilhem Lavaux
c38bd70b64 Fixes to cosmotool to make it compile correctly on more recent cmake 2017-03-01 14:24:35 +01:00
P.M. Sutter
ccf991e88f fixed function declaration 2016-04-20 06:38:16 -05:00
P.M. Sutter
0ed83f698a fixed variable name 2016-04-20 06:30:17 -05:00
P.M. Sutter
78af446812 fiducial omegaM is now correctly passed to generateFromCatalog 2016-04-15 12:22:57 -05:00
P.M. Sutter
9485b2d720 Merge branch 'master' of https://bitbucket.org/cosmicvoids/vide_public 2016-03-13 08:36:32 -05:00
P.M. Sutter
d3ba773b1b fixed bug in launching void overlap code 2016-03-13 08:36:10 -05:00
9b80d84804 Support 64 bits ID in Gadget 2016-02-05 17:12:48 +01:00
959f631b9c Removed verbose header print in Gadget loader 2016-02-01 17:52:15 +01:00
f7b9f4493d Clear IOStream error bits to allow I/O operations again 2016-01-29 14:57:55 +01:00
8e774afb05 Fix in cosmotool for Gadget2 file format 2016-01-28 16:09:42 +01:00
3ce4178322 Verbose block parsing 2016-01-27 15:05:22 +01:00
2fc406af45 Fixlets to have cosmotool compile 2016-01-27 14:59:50 +01:00
Guilhem Lavaux
859e82cafd Fixed argument passingin mock 2016-01-27 11:04:32 +01:00
Guilhem Lavaux
75229b865a Added gadget2 in python tools 2016-01-27 10:50:05 +01:00
Guilhem Lavaux
555e0a4d5a Imported newer version of some cosmotool files 2016-01-26 23:07:47 +01:00
Guilhem Lavaux
90fd74d907 Added Gadget2 support (untested!) 2016-01-26 23:04:01 +01:00
P.M. Sutter
ef3139d886 bug fix in plotting routine 2016-01-20 09:19:16 -06:00
P.M. Sutter
d3cf95bec3 now supports single subdivisions in zobov 2016-01-19 12:58:00 -06:00
P.M. Sutter
add61229cb cataog comparison now supports observations 2016-01-19 09:11:03 -06:00
P.M. Sutter
1607147cb6 volume normalization in catalogUtil just uses zobov info now 2016-01-19 08:39:40 -06:00
P.M. Sutter
113dd647df Merge branch 'master' of https://bitbucket.org/cosmicvoids/vide_public 2016-01-19 08:13:17 -05:00
P.M. Sutter
25c15822c2 fixed bug in merit calculation for cross-comparison 2016-01-19 08:13:05 -05:00
b9256d8300 Use netcdf4 1.1.9 to fix an incompatibility with HDF5 1.8.15 2015-10-30 16:07:04 +01:00
P.M. Sutter
fe6509b3b5 added import 2015-10-29 07:17:49 -04:00
P.M. Sutter
ea3faa2e4c added error handling on read of sselection function file 2015-10-28 21:58:36 -04:00
P.M. Sutter
f190968a81 Merge branch 'master' of https://bitbucket.org/cosmicvoids/vide_public 2015-10-27 10:23:22 -04:00