82 commits

Author	SHA1	Message	Date
P.M. Sutter	6620dd8fd7	changed default subsampling behavior	2014-12-02 09:24:22 -05:00
P.M. Sutter	5ac3586683	remove autostacking	2014-06-03 13:53:09 -04:00
P.M. Sutter	5022567fa1	updated defaults	2014-06-03 00:33:22 -04:00
P.M. Sutter	455fcdb9d8	cleaned out AP from prepareInputs	2014-06-02 10:22:21 -04:00
P.M. Sutter	d306b44f44	Merge branch 'master' of https://bitbucket.org/cosmicvoids/vide_public	2014-06-02 09:50:36 -04:00
P.M. Sutter	05faeafd02	removed AP stages	2014-06-02 09:50:24 -04:00
P.M. Sutter	67700aa659	fixed license	2014-06-01 20:03:08 -05:00
P.M. Sutter	466dfd8576	fixed bug in shifting z-axis	2014-05-29 15:41:37 -05:00
P.M. Sutter	8e13e317da	default to not do subsampling in prep	2014-05-29 14:27:18 -05:00
P.M. Sutter	88dfc4209b	fixed naming issue with unshifted boxes	2014-05-29 14:26:01 -05:00
P.M. Sutter	53398d978c	fix name change	2014-05-29 08:21:51 -04:00
P.M. Sutter	47f6f88d1e	changed doSubSampling variable name; made shifting of z-coord with redshift optional	2014-05-28 18:43:43 -04:00
P.M. Sutter	ec7d983519	removed stackInfo in prepareInputs	2014-05-09 23:52:25 -04:00
P.M. Sutter	1d728c2cc8	name change for preparation script	2014-05-07 21:18:34 -05:00
P.M. Sutter	1380ae2caf	removed AP stacking in preparation script	2014-05-07 13:30:16 -05:00
Guilhem Lavaux	29723fff06	updated copyright notice	2014-04-28 08:52:27 +02:00
P.M. Sutter	73c6aedfc2	much more flexible for handling different stacking and AP approaches	2014-03-11 12:49:02 -05:00
P.M. Sutter	3f5a767b48	significant improvements and streamlining of a-p analysis	2014-02-23 18:20:56 -06:00
P.M. Sutter	e5cc6297fa	consistent handling of comoving coords in sims	2014-02-12 04:52:58 -06:00
P.M. Sutter	59a94ffed8	setup for DR10	2014-02-11 12:27:32 -06:00
P.M. Sutter	5ab0a34129	estimate halo density taken from highest redshiftfor universal minVoidRadius	2014-02-10 03:23:41 -06:00
P.M. Sutter	a9e040540b	fixed bug in handling subhalos	2014-02-09 06:11:06 -06:00
Paul Matthew Sutter	8dbf8f8b54	fixed bug when loading halos	2014-02-03 15:48:15 +01:00
P.M. Sutter	b19fbca2ad	improved handling of SDF files	2014-02-03 04:40:50 -06:00
P.M. Sutter	f91b565d6f	fixed some bugs in density handling; now more flexible approach to SDF files	2014-01-23 21:05:07 -06:00
P.M. Sutter	4d853bbe09	added density thresholding for halos and galaxies in preparation scripts	2014-01-23 17:04:46 -06:00
Paul Matthew Sutter	65cfa8a073	cleaner handling of HOD errors	2014-01-14 11:36:19 +01:00
P.M. Sutter	a513603957	unique filenames for HOD output so scripts can be run in parallel	2014-01-10 10:33:08 -06:00
P.M. Sutter	385c0e65aa	more generic subprocess calling in preparation scripts	2014-01-09 15:05:31 -06:00
P.M. Sutter	3a4b636043	HOD code now callable from prepareCatalogs script	2013-12-31 08:20:56 -06:00
P.M. Sutter	f268820a2e	switched variable name useLCDM to less confusing useComoving; make it sample-level rather than dataset-level	2013-12-19 12:38:05 -06:00
P.M. Sutter	842c2beaaa	changed name in headers	2013-12-01 20:59:00 -06:00
P.M. Sutter	fa0d46c55a	moved all of sample_info printing to launchGenerate	2013-11-30 22:19:58 -06:00
P.M. Sutter	cde70952c4	added logarithmic binning for profiles	2013-11-18 08:00:19 -06:00
P.M. Sutter	0fb3a39b1c	fixed wrongly-placed closefile	2013-10-08 20:57:58 -05:00
P.M. Sutter	cd2bef15b3	stackVoidsZero now (partially) understands periodic boundaries	2013-07-12 03:15:13 -05:00
P.M. Sutter	9700f0d495	prepration script now pays attention to halo/subhalo distinction, and only takes halos	2013-06-29 05:20:15 -05:00
P.M. Sutter	4c97bcb798	halos and hod now only take parent halos	2013-06-19 06:47:56 -05:00
P.M. Sutter	ef5384c54b	prep script now estimates number of halos to get correct minimum threshold void size	2013-06-02 20:47:10 -05:00
P.M. Sutter	3e25f0c276	added dataset name which will be appended to sample nicknames; added descriptive nicknames to masked samples	2013-05-25 02:09:11 -05:00
P.M. Sutter	30655fedaf	fixed some bugs in halo handling	2013-05-07 13:43:45 -05:00
P.M. Sutter	195f19806a	halo files now have regularized names	2013-05-07 03:56:38 -05:00
P.M. Sutter	8be96d88f9	updated script defaults	2013-04-29 21:46:19 -05:00
P.M. Sutter	c088a87809	allow multiple stacks/slices for AP analysis within a redshift bin	2013-04-25 11:05:12 -05:00
P.M. Sutter	c81fd8913b	now outputs mass into particle and halo files	2013-04-25 09:35:32 -05:00
P.M. Sutter	7c6463ff8d	whoops, typed the variable name wrong	2013-04-23 07:42:23 -05:00
P.M. Sutter	76197f1196	prepareCatalogs now checks to see if subsampling is desired before actually subsampling...	2013-04-23 07:40:15 -05:00
P.M. Sutter	765b39ac63	more informative pipeline defaults.py file to describe how to handle particle files; option to do relative or absolute subsampling	2013-04-11 09:50:04 -05:00
P.M. Sutter	2c2426f662	prepareCatalogs now first loads a parameter file full of defaults	2013-04-06 21:39:08 -05:00
P.M. Sutter	94a4261bb9	switched to shorter 'parm' argument, more informative naming of subsamples	2013-03-28 21:31:16 -05:00