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Author SHA1 Message Date
Guilhem Lavaux
aa9fe698b2 Upgraded CosmoToolbox 2013-03-07 09:47:13 -06:00
Guilhem Lavaux
5ad0bed91c If preReShift is specified, also moves back particles to Z=0 in the case of no light cone transformation 2013-03-07 09:34:31 -06:00
Guilhem Lavaux
39d10fdd6b Enforce particles to be in the boxsize for the SDF loader 2013-03-07 09:33:21 -06:00
Guilhem Lavaux
5b410a0008 Updated CosmoTool to last revision for support of KDTree with periodic boundaries 2013-03-05 22:43:27 -05:00
Guilhem Lavaux
bea9fbdef4 Updated CosmoTool to last revision for support of KDTree with periodic boundaries 2013-03-05 22:43:20 -05:00
Guilhem Lavaux
6dc5cf8cc9 Turned on SDF by default 2013-03-05 21:40:04 -05:00
Guilhem Lavaux
aa3410bc78 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-06 00:59:38 +01:00
Guilhem Lavaux
b8fa109008 Fixed position scaling in SDF 2013-03-06 00:59:28 +01:00
P.M. Sutter
08c5752aa0 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-05 13:25:28 -06:00
P.M. Sutter
84fc94f471 HOD appears to work now with SDF format 2013-03-05 13:25:19 -06:00
Guilhem Lavaux
6e164b1fe8 Setup the configured scripts as executables 2013-03-05 13:32:04 -05:00
P.M. Sutter
de9263b1d8 halo catalog prep appear to work with SDF format 2013-03-05 12:30:00 -06:00
Guilhem Lavaux
1c1c8b778e Fixes to SDF loader 2013-03-05 14:56:44 +01:00
Guilhem Lavaux
7737010071 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-05 14:43:04 +01:00
Guilhem Lavaux
132d96adf5 SDF: Do not bulk copy the header but instead copy its components 2013-03-05 08:42:34 -05:00
Guilhem Lavaux
33d0cfa302 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-05 14:23:21 +01:00
P.M. Sutter
f7b4e5076b restarting with multiple subsampling appears to work 2013-03-04 10:44:00 -06:00
P.M. Sutter
eca4ef4362 added to output line to signal which subsampling has been done; output number of particles on resubsample 2013-03-04 08:56:07 -06:00
P.M. Sutter
69aa5b2676 removed assertion that particle IDs are less than number of particles 2013-03-03 23:30:15 -06:00
P.M. Sutter
db6e80a343 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-03 21:00:47 -06:00
P.M. Sutter
29cb7a5a45 committing misc local edits before mergering with GPL'd versions 2013-03-03 21:00:37 -06:00
Guilhem Lavaux
287400f032 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-03 16:26:09 +01:00
P.M. Sutter
af4f6cf41e fixed bug where netcdf files weren't properly closed 2013-03-02 21:51:05 -06:00
Guilhem Lavaux
c385a9a11a Added SDFcvt to the build 2013-03-02 21:41:07 -05:00
Guilhem Lavaux
5d9dad1439 Updated Copyright/License 2013-03-02 20:23:33 -05:00
Guilhem Lavaux
bce9ac1dd3 Removed the possibility of a later version. The patent mess is unclear. 2013-03-02 18:33:33 -05:00
Guilhem Lavaux
aa38661b65 Added copyright/license notice 2013-03-02 18:30:40 -05:00
Guilhem Lavaux
edd9c2a45d Fixed regular expression to only match the first license notice at the top of the file 2013-03-02 18:29:08 -05:00
Guilhem Lavaux
62dfc736d4 Missing imports 2013-03-02 16:46:58 -05:00
Guilhem Lavaux
a829bbf60b Find python/shell/C++ code and add a license header (remove it beforehand if necessary) 2013-03-02 16:44:27 -05:00
Guilhem Lavaux
175e746d02 Apply license code packed into gather_sources.py 2013-03-02 16:43:58 -05:00
Guilhem Lavaux
12ca3bf2e3 Put the name in README 2013-03-02 15:27:27 -06:00
Guilhem Lavaux
b22257b610 Added some tools to manipulate source code in bulk 2013-03-02 15:26:55 -06:00
Guilhem Lavaux
e9194f5c55 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-02 10:45:10 -06:00
Guilhem Lavaux
51c409a170 Maybe incorrect maxCentralDensity ? 2013-03-02 10:45:08 -06:00
Guilhem Lavaux
69def32595 Added more assertion checks. Fixed default value for the subsampling. 2013-03-02 10:44:15 -06:00
Guilhem Lavaux
3c9ad41132 Activated call to SDF loader in generateMock 2013-03-02 09:57:11 -06:00
P.M. Sutter
f2cd2d6a8f Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-02 09:40:28 -06:00
P.M. Sutter
df98c86a03 modified scripts to work with new generateMock 2013-03-02 09:40:06 -06:00
Guilhem Lavaux
536b385c14 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-02 02:30:21 +01:00
Guilhem Lavaux
65800922fa Added the possibility to disable the internal version (default is download/compile everything) 2013-03-02 02:30:09 +01:00
Guilhem Lavaux
9dff8cfb5a Added missing libsw library 2013-03-01 15:43:05 -05:00
P.M. Sutter
86cdfb0421 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-01 10:50:34 -06:00
Guilhem Lavaux
dd5e51c09c Fixed link to libSDF (need librt) and lex generation. 2013-03-01 11:47:20 -05:00
P.M. Sutter
f8c8beafd0 first attempt at doing multiple subsampling with generateMock 2013-03-01 10:31:07 -06:00
Guilhem Lavaux
9e3ab3b045 Imported rest of libSDF / libsw. Removed dependency on preinstalled flex/bison in libdsf 2013-03-01 11:29:01 -05:00
Guilhem Lavaux
a611d77c5d Fix in multidark loader: attributes must not be touched once created. 2013-03-01 08:50:41 -06:00
P.M. Sutter
25e0e8f3ac Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-02-28 22:25:30 -06:00
Guilhem Lavaux
99f1b3888e Fixed spurious braces and a SEGV in multidark loading procedure 2013-02-28 18:24:23 -06:00
P.M. Sutter
2505c70414 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-02-28 17:45:45 -06:00