Commit graph

51 commits

Author SHA1 Message Date
Guilhem Lavaux
a0d5b17164 Have an output that is more informative. 2013-03-19 10:45:33 -04:00
Guilhem Lavaux
5ad0bed91c If preReShift is specified, also moves back particles to Z=0 in the case of no light cone transformation 2013-03-07 09:34:31 -06:00
Guilhem Lavaux
1c1c8b778e Fixes to SDF loader 2013-03-05 14:56:44 +01:00
P.M. Sutter
eca4ef4362 added to output line to signal which subsampling has been done; output number of particles on resubsample 2013-03-04 08:56:07 -06:00
P.M. Sutter
69aa5b2676 removed assertion that particle IDs are less than number of particles 2013-03-03 23:30:15 -06:00
Guilhem Lavaux
5d9dad1439 Updated Copyright/License 2013-03-02 20:23:33 -05:00
Guilhem Lavaux
bce9ac1dd3 Removed the possibility of a later version. The patent mess is unclear. 2013-03-02 18:33:33 -05:00
Guilhem Lavaux
aa38661b65 Added copyright/license notice 2013-03-02 18:30:40 -05:00
Guilhem Lavaux
69def32595 Added more assertion checks. Fixed default value for the subsampling. 2013-03-02 10:44:15 -06:00
Guilhem Lavaux
3c9ad41132 Activated call to SDF loader in generateMock 2013-03-02 09:57:11 -06:00
Guilhem Lavaux
99f1b3888e Fixed spurious braces and a SEGV in multidark loading procedure 2013-02-28 18:24:23 -06:00
Guilhem Lavaux
14b52c4248 Finished subsubsampling on regeneration 2013-02-28 17:09:27 -06:00
Guilhem Lavaux
8625ab633c Added support for subsubsampling 2013-02-28 17:02:30 -05:00
Guilhem Lavaux
91901c0186 Use proper interface to reset the preselector 2013-02-27 14:08:49 -05:00
Guilhem Lavaux
7e121e5b5d Reset the number generator before rerunning the preprocessor 2013-02-27 12:40:11 -06:00
Guilhem Lavaux
5cf7a94538 Moved subsampling to the loaders to be able to do online subsampling (only implemented for gadget and multidark so far, the other coming in...) 2013-02-25 12:29:09 -05:00
P.M. Sutter
7f020f15e5 large files now appear to be supported 2013-02-19 13:30:01 -06:00
Guilhem Lavaux
acd9329b06 Splitted 64 bits into two 32 bits as NetCDF does not support 64 bits integers for storage. (Warning not tested) 2013-02-19 14:19:07 -05:00
Guilhem Lavaux
9bd0cbbb88 Fixed regeneration step in generateMock. Fixed gadget loading (missing initialization for multiple files) 2013-01-29 13:58:12 -06:00
nhamaus
4338a08f44 fixed particle selection problem in generateMock 2013-01-17 15:10:25 +01:00
P.M. Sutter
82c021d478 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-01-16 14:05:19 -06:00
Guilhem Lavaux
537b7c1f43 Huge memory leak: simulations were not destroyed while loading 2013-01-08 03:57:05 -05:00
P.M. Sutter
a7cdb80704 added observation flag in info file; stack voids now shifts particles based on redshift of subsample 2012-12-23 16:38:54 -06:00
P.M. Sutter
e9b2697bc7 fixed printout of subsampling 2012-12-19 08:11:43 -06:00
P.M. Sutter
6e18299ade another attempt at making the jobSuccessful call work; some other minor fixes 2012-12-07 08:11:28 -06:00
Guilhem Lavaux
4c5159823a Removed cubic, Use cube from CosmoTool 2012-11-30 07:39:11 -05:00
Guilhem Lavaux
5783109225 Merge branch 'master' of https://bitbucket.org/cosmicvoids/void_identification 2012-11-30 07:36:00 -05:00
P.M. Sutter
ba2abd1bd6 fixed merge 2012-11-29 11:22:15 -06:00
P.M. Sutter
022eec19bb some bug fixes to the a-p analysis scripts; fixed major bug in prunevoids; updated catalog release scripts 2012-11-29 11:14:59 -06:00
Guilhem Lavaux
9f554e10ed Use NetCDF4 file format for support for large variables 2012-11-24 17:27:12 -05:00
Guilhem Lavaux
602dc86be5 Re-added Flash. Splitted loaders into their own static library 2012-11-24 09:44:48 -06:00
Guilhem Lavaux
6fbf034768 Re-added ramses loader, multidark loader 2012-11-24 09:40:58 -06:00
Guilhem Lavaux
745b073ed6 GenerateMock working with Gadget snapshots 2012-11-23 14:31:46 -06:00
Guilhem Lavaux
5573b82c44 Initialize variables in SimulationLoader 2012-11-23 14:01:09 -05:00
Guilhem Lavaux
91926434a4 Be more verbose 2012-11-23 13:57:00 -05:00
Guilhem Lavaux
b3ee63de56 Moving toward true multi-file handling 2012-11-23 13:49:44 -05:00
Guilhem Lavaux
a4cb64e6c4 Fixed memory bugs in generateMock 2012-11-22 12:16:35 -06:00
Guilhem Lavaux
26f6864f47 Large rework of generateMock for handling partial load of snapshots and thus larger simulations. Work not yet complete. 2012-11-22 10:51:50 -05:00
Guilhem Lavaux
2696ad20d1 Fixed SEGV in case the underlying simulation data does not support uniqueID 2012-11-20 19:21:21 -06:00
Guilhem Lavaux
72cd279b25 Use attribute infrastructure to pass uniqueID tag. 2012-11-20 17:16:45 -05:00
Guilhem Lavaux
a91851de76 Merge 2012-11-20 17:06:20 -05:00
Guilhem Lavaux
7d90960783 Added support for unordered particle id 2012-11-20 10:05:24 -05:00
Guilhem Lavaux
03782c8843 Emit the particle id and not its rank. At the moment the two are equivalent but will change. 2012-11-20 09:56:24 -05:00
P.M. Sutter
80c2b7f603 more bug fixes for the minimum halo mass cuts...sigh 2012-11-18 22:47:49 -06:00
P.M. Sutter
0b54a31d0c many bug fixes from the previous update; new changes appear to work now 2012-11-18 14:23:50 -06:00
P.M. Sutter
90964d2be3 fixed bugs associated with saving RA and Dec 2012-11-17 13:01:39 -06:00
Paul Matt Sutter
a53e3bf290 reconfigured to put RA, Dec, redshift, and unique (catalog) ID in the binary ZOBOV file 2012-11-17 02:49:02 -05:00
P.M. Sutter
08ea4ef0a2 more informative sample_info file 2012-11-13 13:56:44 -06:00
Guilhem Lavaux
9b8ce57a97 Imported code for flexible gadget units. Imported load ramses code. Always invoke metricTransform. Add the option to import box parameters from an already existing mock catalog 2012-11-08 10:00:08 -05:00
P.M. Sutter
21431f9a31 added a-p analysis script to repo; some minor bug fixes to adjust tools to work with simulation data 2012-11-02 08:19:23 -05:00