Commit graph

302 commits

Author SHA1 Message Date
P.M. Sutter
dbc4c87c3e removed a few extraneous checks in launchers 2013-04-11 09:53:01 -05:00
P.M. Sutter
765b39ac63 more informative pipeline defaults.py file to describe how to handle particle files; option to do relative or absolute subsampling 2013-04-11 09:50:04 -05:00
P.M. Sutter
2c2426f662 prepareCatalogs now first loads a parameter file full of defaults 2013-04-06 21:39:08 -05:00
P.M. Sutter
3b7b1dd4d2 void overlap analysis now uses untrimmed catalog by default 2013-04-01 13:04:40 -05:00
P.M. Sutter
2e832dd415 void overlap now gets barycenters from center_ file rather than barycenter_ file 2013-03-31 22:04:27 -05:00
P.M. Sutter
151c605335 pruneVoids now cleans out non-leaf voids; adjusted stackVoidsZero launcher to accept custom stacks 2013-03-30 15:24:45 -05:00
P.M. Sutter
94a4261bb9 switched to shorter 'parm' argument, more informative naming of subsamples 2013-03-28 21:31:16 -05:00
P.M. Sutter
afb562d419 once again, fixed bug in periodic boundary detection... 2013-03-24 16:06:01 -05:00
P.M. Sutter
8043742123 added script to compare stacks and radial profiles of matched voids 2013-03-23 11:50:17 -05:00
P.M. Sutter
f699ed372f added nico's cross-correlation script to a new directory, analysis/ 2013-03-22 11:46:20 -05:00
P.M. Sutter
02f756e8a5 integrated nico's cross-correlation backend and enabled plotting of the void distribution 2013-03-22 08:51:45 -05:00
P.M. Sutter
60965e1fa4 multiple levels of subsampling now correctly handled 2013-03-21 21:54:56 -05:00
P.M. Sutter
b1dc0abc0c can now do sdf subsampling (optionally) within prepareCatalogs 2013-03-21 21:51:29 -05:00
P.M. Sutter
25a6ead259 can now do subsampling of sdf in prepareCatalogs 2013-03-20 07:21:02 -05:00
P.M. Sutter
7c172d5642 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-20 07:19:34 -05:00
P.M. Sutter
7c16c9477f more correct handling of multiple subsample levels 2013-03-20 07:19:25 -05:00
Guilhem Lavaux
444cd8dad4 Added explanatory exception instead of a cryptic error for sample.dataFormat 2013-03-19 20:35:42 +01:00
P.M. Sutter
84fc94f471 HOD appears to work now with SDF format 2013-03-05 13:25:19 -06:00
P.M. Sutter
de9263b1d8 halo catalog prep appear to work with SDF format 2013-03-05 12:30:00 -06:00
P.M. Sutter
f7b4e5076b restarting with multiple subsampling appears to work 2013-03-04 10:44:00 -06:00
P.M. Sutter
db6e80a343 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-03 21:00:47 -06:00
P.M. Sutter
29cb7a5a45 committing misc local edits before mergering with GPL'd versions 2013-03-03 21:00:37 -06:00
P.M. Sutter
af4f6cf41e fixed bug where netcdf files weren't properly closed 2013-03-02 21:51:05 -06:00
Guilhem Lavaux
5d9dad1439 Updated Copyright/License 2013-03-02 20:23:33 -05:00
Guilhem Lavaux
bce9ac1dd3 Removed the possibility of a later version. The patent mess is unclear. 2013-03-02 18:33:33 -05:00
Guilhem Lavaux
aa38661b65 Added copyright/license notice 2013-03-02 18:30:40 -05:00
Guilhem Lavaux
e9194f5c55 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-02 10:45:10 -06:00
Guilhem Lavaux
51c409a170 Maybe incorrect maxCentralDensity ? 2013-03-02 10:45:08 -06:00
P.M. Sutter
df98c86a03 modified scripts to work with new generateMock 2013-03-02 09:40:06 -06:00
P.M. Sutter
f8c8beafd0 first attempt at doing multiple subsampling with generateMock 2013-03-01 10:31:07 -06:00
P.M. Sutter
7366ab3981 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-02-28 09:16:27 -06:00
P.M. Sutter
33cc210bbe fixed issues with slicing in redshift or real space 2013-02-27 16:28:00 -06:00
Guilhem Lavaux
f12ed039e5 Fixed compile error in development code stackVelocityField 2013-02-27 13:16:09 -06:00
Guilhem Lavaux
c6dd08bd7d Merge branch 'master' of https://bitbucket.org/cosmicvoids/void_identification 2013-02-26 17:46:11 -05:00
P.M. Sutter
260385d9d0 fix to prepareCatalogs to correctly handle non-lightconed outputs 2013-02-25 23:04:24 -06:00
P.M. Sutter
343250de42 removed spurius line from launchPrune 2013-02-25 15:32:08 -06:00
P.M. Sutter
a7c352975c signal end of script in prepareCatalogs 2013-02-25 14:33:14 -06:00
P.M. Sutter
fa7264e4ee cleaned up logic and output handling in prunevoids; added combined SDSS analysis script; added data preparation scripts 2013-02-25 12:30:24 -06:00
Guilhem Lavaux
ecb4479178 Merge branch 'master' of https://bitbucket.org/cosmicvoids/void_identification 2013-02-24 14:15:34 -05:00
Guilhem Lavaux
e0c2862d2c Added some velocity field stacking support 2013-02-24 14:15:21 -05:00
P.M. Sutter
dd68b1f91c harmonized subsample defition between generateMock and prepareCatalogs 2013-02-18 08:28:26 -06:00
P.M. Sutter
1a62f691ef removed the maxkeep criterion in subsampling 2013-02-18 07:11:27 -06:00
P.M. Sutter
3a12e32f2c scripts now report status even when running in background 2013-02-15 13:48:04 -06:00
P.M. Sutter
0b4644471a fixed combining stacks with zobov cuts 2013-02-11 19:29:50 -06:00
P.M. Sutter
ee87db1517 added ability to do many HOD runs easily 2013-02-11 14:17:39 -06:00
P.M. Sutter
168ef7a0d7 merged guilhem's and my updates 2013-02-09 14:12:40 -06:00
P.M. Sutter
950c6e810a start of shape measurement in void outputs; some improvements and bug fixes to AP analysis 2013-02-09 14:08:44 -06:00
Guilhem Lavaux
116cd950e3 Added support for regeneration (to finely test impact of peculiar velocities) 2013-01-29 14:02:00 -06:00
P.M. Sutter
2584645520 added new data type for inputs, more flexible handling of halo catalog file names 2013-01-24 05:24:18 -06:00
P.M. Sutter
ae9701e99c replaced void shape fitter with rudimentary moment of inertia calculation 2013-01-18 09:56:31 -06:00