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Author	SHA1	Message	Date
Guilhem Lavaux	4f9fd340f0	Indicate at which point of the text stream is the failure	2013-04-15 08:49:42 -04:00
P.M. Sutter	bf39356027	update to example mergertree512 pipeline script	2013-04-11 09:54:49 -05:00
P.M. Sutter	a04bf89265	multiple improvement to cross-comparison analysis	2013-04-11 09:54:14 -05:00
P.M. Sutter	f17e2dbdc8	plotting now defaults to the untrimmed catalog	2013-04-11 09:53:36 -05:00
P.M. Sutter	dbc4c87c3e	removed a few extraneous checks in launchers	2013-04-11 09:53:01 -05:00
P.M. Sutter	a343938049	removed long output from profile building	2013-04-11 09:52:17 -05:00
P.M. Sutter	513a0c2dea	more informative output when walking tree	2013-04-11 09:51:14 -05:00
P.M. Sutter	96a96f9680	better pruning of bad voids	2013-04-11 09:50:32 -05:00
P.M. Sutter	765b39ac63	more informative pipeline defaults.py file to describe how to handle particle files; option to do relative or absolute subsampling	2013-04-11 09:50:04 -05:00
P.M. Sutter	c51d324bc0	slightly more informative pipeline headers	2013-04-06 21:46:29 -05:00
P.M. Sutter	fa6826f8f5	fixed a small logic bug	2013-04-06 21:39:26 -05:00
P.M. Sutter	2c2426f662	prepareCatalogs now first loads a parameter file full of defaults	2013-04-06 21:39:08 -05:00
P.M. Sutter	870e611b6a	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-04-05 10:50:19 -05:00
Guilhem Lavaux	1a518dd8e5	Temporarily remove the OVERFLOW requirement in jozov2_io	2013-04-05 10:47:52 -05:00
P.M. Sutter	c999e9e235	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-04-04 17:11:43 -05:00
P.M. Sutter	dcd4733236	updated plotting routine to optionally show the scatter bounding many runs	2013-04-04 16:15:28 -05:00
Guilhem Lavaux	96b0ba3154	Fixed erroneous handling of zones with exact same leakage value in jozov2.	2013-04-04 12:04:52 -05:00
P.M. Sutter	f3408eea10	mask application now supports multiple rotations of the same data set to maximize reusability	2013-04-03 21:29:13 -05:00
P.M. Sutter	660d23a022	re-organized checks for ID list in stackVoidsZero to save computation time; cleaned up output	2013-04-03 20:47:08 -05:00
Guilhem Lavaux	85546379cf	Cleanup some development cruft and re-enable openmp clause in jozov2	2013-04-02 09:06:56 -05:00
Guilhem Lavaux	5c40a6c226	Allow for a particle duplicate in voztie if and only if the adjacencies are strictly equal.	2013-04-02 09:06:23 -05:00
Guilhem Lavaux	91a222a3c3	Re-Implemented jozov2 using priority_queues (far less complicated and maybe better performing)	2013-04-01 21:30:45 -05:00
P.M. Sutter	3a15a27955	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-04-01 21:11:06 -05:00
P.M. Sutter	a1a062c50f	skipped the barycenter computation entirely if it's been precomputed	2013-04-01 20:01:08 -05:00
Guilhem Lavaux	9a63f289d7	Take a few shortcuts in jozov2 to speed up the computation of the largest voids. The output does not seem totally consistent though.	2013-04-01 23:36:32 +02:00
Guilhem Lavaux	0879abed75	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-04-01 23:34:19 +02:00
P.M. Sutter	3b7b1dd4d2	void overlap analysis now uses untrimmed catalog by default	2013-04-01 13:04:40 -05:00
P.M. Sutter	69fdf9b669	pruneVoids now outputs a *complete* trimmed and untrimmed catalog, rather than just a centers_nocut_ file. centers_nocut_ is now removed and the untrimmed catalog has a prefix untrimmed_	2013-04-01 13:03:07 -05:00
Guilhem Lavaux	3df580e03e	Added more verbosity to track the evolution	2013-04-01 19:11:19 +02:00
P.M. Sutter	fef092df26	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-04-01 10:40:52 -05:00
P.M. Sutter	afd6e75ef3	better example configuration file	2013-04-01 10:40:30 -05:00
Guilhem Lavaux	45c9d4d62a	Temporarily disable new done_zones array	2013-04-01 10:25:15 -04:00
Guilhem Lavaux	d0901e6d95	Fixed zone lookup in jozov2	2013-04-01 10:15:11 -04:00
Guilhem Lavaux	33b32ea43d	Correct memory cleanup.	2013-04-01 09:43:05 -04:00
Guilhem Lavaux	b555533fa3	Added openmp-ization of jozov2_watershed	2013-04-01 09:39:58 -04:00
Guilhem Lavaux	9b0e7e115e	Splitted jozov2 into several files for better readability	2013-04-01 09:32:09 -04:00
Guilhem Lavaux	60e692a0cb	Removed old unused code (jozov_persistent). Activated jozov2 cleaned implementation of jozov in C++.	2013-04-01 09:02:59 -04:00
P.M. Sutter	a2ad3cc4f2	whoops, inserted a bug	2013-03-31 22:32:36 -05:00
P.M. Sutter	2e832dd415	void overlap now gets barycenters from center_ file rather than barycenter_ file	2013-03-31 22:04:27 -05:00
P.M. Sutter	4cd7408a8a	now switched to accepting only top-level voids; harmonized ancillary files (barycenters_, voidDesc_) to the output of centers_	2013-03-31 22:03:22 -05:00
Guilhem Lavaux	6a15e59521	Sort and use the sorted zone property to change some if statements	2013-03-31 19:35:03 -04:00
Guilhem Lavaux	311ac50344	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-03-31 17:07:36 -04:00
Guilhem Lavaux	5a0f2383b3	Merge branch 'master' of ssh://bitbucket.org/cosmicvoids/void_identification	2013-03-31 17:01:47 -04:00
Guilhem Lavaux	af425f345d	Better hubble constant decoding in SDF	2013-03-31 17:01:44 -04:00
Guilhem Lavaux	e494ab1116	Free sorter	2013-03-31 11:09:34 -04:00
Guilhem Lavaux	9b7a931db9	New C++ jozov. Preliminary work before rewrite of the watershed transform algorithm.	2013-03-31 11:08:57 -04:00
Guilhem Lavaux	f1bfdadd01	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-03-30 15:26:53 -05:00
Guilhem Lavaux	9c329086af	Fixed computation of the maximum number of particles accepted by Qhull	2013-03-30 15:26:37 -05:00
P.M. Sutter	fcafc8e5d3	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-03-30 15:25:06 -05:00
P.M. Sutter	151c605335	pruneVoids now cleans out non-leaf voids; adjusted stackVoidsZero launcher to accept custom stacks	2013-03-30 15:24:45 -05:00