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Author SHA1 Message Date
P.M. Sutter
870e611b6a Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-05 10:50:19 -05:00
Guilhem Lavaux
1a518dd8e5 Temporarily remove the OVERFLOW requirement in jozov2_io 2013-04-05 10:47:52 -05:00
P.M. Sutter
c999e9e235 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-04 17:11:43 -05:00
P.M. Sutter
dcd4733236 updated plotting routine to optionally show the scatter bounding many runs 2013-04-04 16:15:28 -05:00
Guilhem Lavaux
96b0ba3154 Fixed erroneous handling of zones with exact same leakage value in jozov2. 2013-04-04 12:04:52 -05:00
P.M. Sutter
f3408eea10 mask application now supports multiple rotations of the same data set to maximize reusability 2013-04-03 21:29:13 -05:00
P.M. Sutter
660d23a022 re-organized checks for ID list in stackVoidsZero to save computation time; cleaned up output 2013-04-03 20:47:08 -05:00
Guilhem Lavaux
85546379cf Cleanup some development cruft and re-enable openmp clause in jozov2 2013-04-02 09:06:56 -05:00
Guilhem Lavaux
5c40a6c226 Allow for a particle duplicate in voztie if and only if the adjacencies are strictly equal. 2013-04-02 09:06:23 -05:00
Guilhem Lavaux
91a222a3c3 Re-Implemented jozov2 using priority_queues (far less complicated and maybe better performing) 2013-04-01 21:30:45 -05:00
P.M. Sutter
3a15a27955 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-01 21:11:06 -05:00
P.M. Sutter
a1a062c50f skipped the barycenter computation entirely if it's been precomputed 2013-04-01 20:01:08 -05:00
Guilhem Lavaux
9a63f289d7 Take a few shortcuts in jozov2 to speed up the computation of the largest voids. The output does not seem totally consistent though. 2013-04-01 23:36:32 +02:00
Guilhem Lavaux
0879abed75 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-01 23:34:19 +02:00
P.M. Sutter
3b7b1dd4d2 void overlap analysis now uses untrimmed catalog by default 2013-04-01 13:04:40 -05:00
P.M. Sutter
69fdf9b669 pruneVoids now outputs a *complete* trimmed and untrimmed catalog, rather than just a centers_nocut_ file. centers_nocut_ is now removed and the untrimmed catalog has a prefix untrimmed_ 2013-04-01 13:03:07 -05:00
Guilhem Lavaux
3df580e03e Added more verbosity to track the evolution 2013-04-01 19:11:19 +02:00
P.M. Sutter
fef092df26 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-04-01 10:40:52 -05:00
P.M. Sutter
afd6e75ef3 better example configuration file 2013-04-01 10:40:30 -05:00
Guilhem Lavaux
45c9d4d62a Temporarily disable new done_zones array 2013-04-01 10:25:15 -04:00
Guilhem Lavaux
d0901e6d95 Fixed zone lookup in jozov2 2013-04-01 10:15:11 -04:00
Guilhem Lavaux
33b32ea43d Correct memory cleanup. 2013-04-01 09:43:05 -04:00
Guilhem Lavaux
b555533fa3 Added openmp-ization of jozov2_watershed 2013-04-01 09:39:58 -04:00
Guilhem Lavaux
9b0e7e115e Splitted jozov2 into several files for better readability 2013-04-01 09:32:09 -04:00
Guilhem Lavaux
60e692a0cb Removed old unused code (jozov_persistent). Activated jozov2 cleaned implementation of jozov in C++. 2013-04-01 09:02:59 -04:00
P.M. Sutter
a2ad3cc4f2 whoops, inserted a bug 2013-03-31 22:32:36 -05:00
P.M. Sutter
2e832dd415 void overlap now gets barycenters from center_ file rather than barycenter_ file 2013-03-31 22:04:27 -05:00
P.M. Sutter
4cd7408a8a now switched to accepting only top-level voids; harmonized ancillary files (barycenters_, voidDesc_) to the output of centers_ 2013-03-31 22:03:22 -05:00
Guilhem Lavaux
6a15e59521 Sort and use the sorted zone property to change some if statements 2013-03-31 19:35:03 -04:00
Guilhem Lavaux
311ac50344 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-31 17:07:36 -04:00
Guilhem Lavaux
5a0f2383b3 Merge branch 'master' of ssh://bitbucket.org/cosmicvoids/void_identification 2013-03-31 17:01:47 -04:00
Guilhem Lavaux
af425f345d Better hubble constant decoding in SDF 2013-03-31 17:01:44 -04:00
Guilhem Lavaux
e494ab1116 Free sorter 2013-03-31 11:09:34 -04:00
Guilhem Lavaux
9b7a931db9 New C++ jozov. Preliminary work before rewrite of the watershed transform algorithm. 2013-03-31 11:08:57 -04:00
Guilhem Lavaux
f1bfdadd01 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-30 15:26:53 -05:00
Guilhem Lavaux
9c329086af Fixed computation of the maximum number of particles accepted by Qhull 2013-03-30 15:26:37 -05:00
P.M. Sutter
fcafc8e5d3 Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-30 15:25:06 -05:00
P.M. Sutter
151c605335 pruneVoids now cleans out non-leaf voids; adjusted stackVoidsZero launcher to accept custom stacks 2013-03-30 15:24:45 -05:00
Guilhem Lavaux
7770f40aff Early check for Qhull overflow 2013-03-30 16:17:34 -04:00
Guilhem Lavaux
92ce95f5d2 Introduced error checking at the end of the tesselation to be sure if it is worth continuing. 2013-03-30 15:56:34 -04:00
P.M. Sutter
765ba3b500 removed temporary child/parent output; better handling of acceptable ID list 2013-03-28 21:33:29 -05:00
P.M. Sutter
5259137de7 switched to shorter 'parm' argument 2013-03-28 21:31:38 -05:00
P.M. Sutter
94a4261bb9 switched to shorter 'parm' argument, more informative naming of subsamples 2013-03-28 21:31:16 -05:00
P.M. Sutter
34400fbaca Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification 2013-03-28 21:19:07 -05:00
P.M. Sutter
2bc3b3ef27 pruneVoids now (rather clumsily) loads tree information; rejects voids that are not leaf nodes 2013-03-28 20:37:28 -05:00
Guilhem Lavaux
aaef7634cd Harden zobov for problems link to single precisions (not fool proof yet but make the problem more unlikely) 2013-03-26 09:18:24 +01:00
P.M. Sutter
afb562d419 once again, fixed bug in periodic boundary detection... 2013-03-24 16:06:01 -05:00
P.M. Sutter
8043742123 added script to compare stacks and radial profiles of matched voids 2013-03-23 11:50:17 -05:00
Guilhem Lavaux
f1e80ac6ed Have mockIndex set to np if negative in jozov 2013-03-22 21:19:04 +01:00
Guilhem Lavaux
bdb6ff2ebd Removed buggy code that double counted adjacencies 2013-03-22 21:18:27 +01:00