Commit graph

8 commits

Author SHA1 Message Date
Richard Stiskalek
ae92fd9b72
Velocity observer (#86)
* Continue if r200c not defined

* Remove smooth scale

* Remove smooth scale

* Edit Max Matching plot

* Add peculiar velocity

* Add Vobs calculation

* Edit docs

* Add Vobs plot

* Improve plotting

* Edit naming convention

* Make a note

* Add new cat options

* Update density field RSP calculation

* Update field 2 rsp

* Move functions and shorten documentation

* Improve transforms and comments

* Update docs

* Update imports

* Edit calculation

* Add docs

* Remove imports

* Add Quijote flags

* Edit documentation

* Shorten documentation

* Edit func calls

* Shorten

* Docs edits

* Edit docs

* Shorten docs

* Short docs edits

* Simplify docs a little bit

* Save plotting

* Update env
2023-08-30 23:27:20 +01:00
Richard Stiskalek
f4a7cb0d16
Remove halo fitting. (#83)
* Rename file

* Remove old content

* Remove halo fit

* Completely remove fits

* Add utils here

* Account for renaming
2023-08-07 11:33:27 +02:00
rstiskalek
46848a86eb Edit docs 2023-07-31 20:23:56 +01:00
rstiskalek
f21abc28e7 Add lower and upper limits 2023-07-31 20:13:10 +01:00
Richard Stiskalek
acb8d9571c
Update units to be consistent. (#78)
* Fix Quijote units

* Updates to units

* Fix how things are loaded

* Updating definitions & conventions

* Clear up how fiducial observers in quijote work

* Refactorize array manip

* Move function definition

* More code refactoring

* Remove unused argument

* Remove `convert_from_box`

* Make a note

* Converting particle units

* Add notes about units

* Remove box constants

* Add rho_crit0

* Fix spherical overdensity mass units

* Refactor more code

* Edit catalogue kwargs

* Edit the docstring

* Edit bounds

* Add new checks for empty array

* Remove unused import

* Remove old code

* Remove old function

* Update real 2 redshift

* Clear up the RSP conv

* Add comments

* Add some units
2023-07-28 21:07:28 +02:00
Richard Stiskalek
e08c741fc8
Improving halo fits (#76)
* Add periodic distances

* Little corrections

* Fix little bug

* Modernise the script

* Small updates

* Remove clump

* Add new halo routines

* Fix weights

* Modernise the script

* Add check ups on convergence

* More convergence check ups

* Edit bounds

* Add default argument

* Update fit heuristic and NaNs

* Change maxiter

* Switch NFW minimization to log-sapce

* Remove print statement

* Turn convert_from_box abstract property required for all boxes.

* Move files

* Simplify script

* Improve the argument parser

* Remove optinal argument

* Improve argument parser

* Add a minimum concentration limit
2023-07-25 16:12:58 +02:00
Richard Stiskalek
eb8d070fff
CSiBORG FoF switch (#75)
* Add moving FoF membership files

* add FoF membership path

* Add notes where its PHEW

* Add FoF catalogue path

* Correct typo

* Add more functionalities

* Make work with halo IDs from FoF

* Edit print statement

* Fix copy bug

* copy

* Add FoF catalogue reading

* Clean up script

* Fix typo

* Little edits

* Fix naming convention

* Rename key

* Remove loading substructure particles

* Rename CSiBORG Cat

* Rename clumps cat

* Rename cat

* Remove misplaced import

* Switch to halos

* rm import

* structfit of only halos

* Add FoF halo reading

* Add a short comment

* Fix __getitem__ to work with int

* Fix problems

* Improve __getitem__

* Add more conversion

* Fix indexing

* Fix __getitem__ assertion

* Fix numbers

* Rename

* Fix verbosity flags

* Add full Quijote HMF option

* Add plot of Quijote only

* Add quijote full paths

* Fix the fit_init script

* Renam arg

* Update .gitignore

* add default argument name

* Change default verbosity flag

* Modernise script structure

* Fix dictionary

* Fix reading to include m200c

* Modernise script

* Add args
2023-07-24 14:10:21 +02:00
Richard Stiskalek
dbf93b9416
Lagrangian patch + HMF calculation (#65)
* Rename lagpatch

* Fix old bug

* Fix small bug

* Add number of cells calculation

* Fix a small bug

* Rename column

* Move file

* Small changes

* Edit style

* Add plot script

* Add delta2ncells

* Add HMF calculation

* Move definition around

* Add HMF plot

* pep8

* Update HMF plotting routine

* Small edit
2023-06-01 14:45:52 +01:00