Richard Stiskalek
13a9d11afe
Particle init CM separation ( #17 )
...
* Rename
* rename module
* add new_ic_ids
* Add to_new support
* rm unnecessary comment
* Remove JUlia!
* add new package attempt
* add dump script
* simplify positions getter
* Remove unused code
* change dumpdirs
* update project
* Add sorting
* fix indexing bug
* add comment
* Add particle dumping
* Delete blank line
* Delete Julia things
* Update README
* add working script
* fix assignment bug
* fix bug
* save temp to temp folder
* fix indexing bug & path
* do not always crreate folder
* Rename file
* add initcm reader
* add x0, y0, z0 transforms
* add initcm to halo cat
* docs update
* add initial KNN
* add attempt at init match
* add initial fiducial radius
* rm blank space
* Add further KNN Init pos support
* Add init radius support
* Remove message about the bug
* Get rid of an error msg
* purge mention of knn_init
* Add init CM distance calc
2022-12-16 11:18:16 +01:00
Richard Stiskalek
c3c686fa60
Power spectrum stuff ( #16 )
...
* add autok1d
* update TODO
* add basic cross pk
* del blank line
* fix small bugs
* fix loop bug
* rm nbs
* edit docstring
* Update TODO
* get rid of verbose flag
* take all ICs
* attempt better memory
* simplify ASCII dump
* rm verbose statement to get rid of bugs!
* close fortran files
* add MAS options
* add boxsize setter
* Move comment up
* paths chagne
* Update TODO
* Update TODO
* Forgotten units in Xpk
* Attempt at fixing the distance bug
* Update TODO
* Update TODO
* Remove comment
* add summary reader
* Update gitignore
2022-12-12 14:42:44 +00:00
Richard Stiskalek
1bb4255874
SDSS galaxies and catalogs rework ( #15 )
...
* add SDSS skeleton
* rm nb
* update gitignore
* add docs
* add survey volume
* add masking
* add SDSS mask
* add SDSS comments
* add reference
* rm
* move planck to fits clusters
* Rm comment
* update masking routines
* rm masks
* Update docs
* rm data
* make MCXC fits surv
* change MCXC name
* Move to extrasapce
* Update paths
2022-12-05 11:36:41 +00:00
Richard Stiskalek
91beb4df50
Angular momentum ( #14 )
...
* add ang mom
* Update TODO
* add ascii dump script
* add comment
* Updating TODO
* add angmom
* add garbage collector
2022-11-30 16:12:39 +00:00
rstiskalek
92699bfb0a
update TODO
2022-11-30 13:42:00 +00:00
rstiskalek
5435781e8d
add the grav field
2022-11-30 13:41:35 +00:00
Richard Stiskalek
6aa3721c83
Potential ( #13 )
...
* add basic density field
* Add TODO
* add field smoothing
* update how pos are calculated
* add transforms both ways
* add import
* add sky density
* add make skymap func
* update TODO
* update gitignore
* add potential field calculation
* delete boxsize setter
* add tidal tensor
2022-11-27 07:53:38 +00:00
rstiskalek
ea73dfcd56
Update TODO
2022-11-25 16:46:28 +00:00
rstiskalek
2a5d6a03b6
add distance cut
2022-11-25 16:45:27 +00:00
rstiskalek
d8adf56614
edit TODO
2022-11-25 15:07:53 +00:00
Richard Stiskalek
ca45fbd5d9
add ascii writing ( #12 )
2022-11-25 15:06:10 +00:00
rstiskalek
469f4988fa
update TODO
2022-11-25 12:45:47 +00:00
rstiskalek
4e87a96b97
fix bug(again)
2022-11-25 12:42:49 +00:00
rstiskalek
8d68f35cf9
swithc to own G
2022-11-25 12:28:46 +00:00
rstiskalek
a3c7d03ceb
fix bug
2022-11-25 12:28:41 +00:00
rstiskalek
377d6ebb7e
add lambda200c support
2022-11-25 12:24:06 +00:00
rstiskalek
69d1f28fcc
add lambda200c calc
2022-11-25 12:23:43 +00:00
rstiskalek
e5208ed070
add note
2022-11-25 11:52:31 +00:00
rstiskalek
91bddb1d3a
remove not good comments
2022-11-25 11:45:47 +00:00
rstiskalek
9fe745b0b4
add center of mass
2022-11-25 10:54:09 +00:00
Richard Stiskalek
161c27d995
Particle match & file system & phase space ( #11 )
...
* Create file system
* add doc
* add n_sim n_snap directly to paths
* Move things to a single particle reader for consistency
* add docstring
* add srdcir, dumpdir and mmain_path
* make boxunits work with paths
* switch to using paths
* add tempdumpdir
* rm dependence on old functions
* rm comment
* rm unused import
* go back to all imports
* fix import bug
* rm dependence on old functions
* modernize code!
* fix typo
* fix typo
* update fits to new data structureing
* change docs
* add julia repo
* add setup
* add install commands
* ignore install files
* add array flattening
* update dependene
* add positions reader
* update manifest and projects
* add func
* update gitignore
* pos matching progress
* move file
* rm comment
* add velocities getter
* fix bug
* fix name bug
* fix path bug
* fix args func
* add redshift calculation to catalogues
* add shortcut to set n_sim and n_snap
* if cond bug
* add the cosine similarity
* add verbosit iterator
* add docs
* update README
* update README
* update README
2022-11-25 10:44:08 +00:00
Richard Stiskalek
c748c87e45
New filesystem, basic neighbours calculation ( #10 )
...
* simplify Planck catalogue
* add MCXC and base survey
* Add 2MPP classes
* move match to MCXC to Planck
* add halo catalogue
* rm comment
* rm unused imports
* Move conversion to box
* add min mass
* Run on all simulations
* rm old function
* add combined catalogue
* add halo positions
* add knn neighbors
* set to 5 sims for testing
* add docstring
* Switch to neighbours in a catalogue
* rename io to read
* fix indentation
* rename to read
* io -> read
* add import
* add RealisationMatcher
* io -> read
* add docstrings
* add search_sim_indiices
* update todo
* keep make_cat at 10 for now
* update nb
2022-11-22 10:00:01 +00:00
rstiskalek
f5bf04c46e
update nb
2022-11-20 14:11:35 +00:00
rstiskalek
6a9db75549
add pec redshift
2022-11-20 14:11:32 +00:00
rstiskalek
3352b06c1c
add units
2022-11-20 14:11:25 +00:00
rstiskalek
1d9789c08e
add vx
2022-11-20 14:11:19 +00:00
rstiskalek
1037aa4db9
add velocity conversion
2022-11-18 10:53:06 +00:00
rstiskalek
858a153fad
add box2cosmoredshift
2022-11-18 10:44:41 +00:00
rstiskalek
06d3fede95
add max snapshot
2022-11-14 16:24:53 +00:00
rstiskalek
f33bf0c3b2
add the maximum snapshot
2022-11-14 16:22:45 +00:00
rstiskalek
76349bab3f
add MPI and do for all boxes
2022-11-14 15:52:52 +00:00
Richard Stiskalek
17badf2652
X-ray data ( #9 )
...
* add xray reading
* add import
* add more comments
* add data
* add nb
* add MCXC shortcut
* add match indxs to Planck of MCXC
* add import
* update TODO
* update readme
* add famous clusters
* add 2mpp_groups
* shorten paths
* add 2M++ groups
* add import
* Update TODO
2022-11-10 07:40:44 +00:00
rstiskalek
f69def9878
Merge branch 'master' of https://github.com/Richard-Sti/galomatch
2022-11-06 21:02:57 +00:00
Richard Stiskalek
f0821c54bf
Clean up old functions ( #8 )
...
* update nbs
* rm unused functions
* simplify loading
* optionally return counts as well
* update TODO
* update TODO
2022-11-06 21:02:24 +00:00
rstiskalek
a3ccc029cd
update TODO
2022-11-06 21:01:43 +00:00
rstiskalek
760ba06689
update TODO
2022-11-06 20:59:39 +00:00
rstiskalek
d4f89fc343
optionally return counts as well
2022-11-06 20:58:57 +00:00
rstiskalek
d69012424e
simplify loading
2022-11-06 20:55:49 +00:00
rstiskalek
e4ec1c4daa
rm unused functions
2022-11-06 20:55:34 +00:00
rstiskalek
9291414572
update nbs
2022-11-06 20:53:58 +00:00
rstiskalek
a0f187d660
update TODO
2022-11-06 10:28:32 +00:00
Richard Stiskalek
d32eb5c134
Data loading shortcut ( #7 )
...
* add load_processed
* update TODO
2022-11-06 10:26:24 +00:00
rstiskalek
364f3b2137
rm blank
2022-11-06 10:06:48 +00:00
rstiskalek
859e3f4eb2
change density to mass/mpc^3
2022-11-06 10:06:40 +00:00
rstiskalek
5fa429ceb0
Update TODO
2022-11-06 09:11:21 +00:00
rstiskalek
91ad3166f8
Update TODO
2022-11-06 09:07:27 +00:00
rstiskalek
0baa81a4f4
centre coords at 0
2022-11-06 09:06:03 +00:00
rstiskalek
1cd3f10848
add num density
2022-11-06 09:05:51 +00:00
rstiskalek
3979650663
add boxunits transform on array
2022-11-06 06:32:28 +00:00
Richard Stiskalek
7f58b1f78c
JAX and fix conc ( #6 )
...
* change to log10 initlogRs
* add uncertainty
* add check if hessian negative
* update TODO
* update TODO
* output the error too
* save e_logRs
* add concentration calculation
* calcul concentration
* missed comma in a list
* Update TODO
* fix bug
* add box units and pretty status
* make uncertainty optional
* add BIC function
* remove BIC again
* add new overdensity calculation
* change defualt values to max dist and mass
* change to r200
* new halo find
* speed up the calculation
* add commented fucn
* update TODO
* add check whether too close to outside boundary
* Update TODO
* extract velocity as well
* calculate m200 and m500
* update nb
* update TODO
2022-11-05 21:17:05 +00:00
