Richard Stiskalek
13a9d11afe
Particle init CM separation ( #17 )
...
* Rename
* rename module
* add new_ic_ids
* Add to_new support
* rm unnecessary comment
* Remove JUlia!
* add new package attempt
* add dump script
* simplify positions getter
* Remove unused code
* change dumpdirs
* update project
* Add sorting
* fix indexing bug
* add comment
* Add particle dumping
* Delete blank line
* Delete Julia things
* Update README
* add working script
* fix assignment bug
* fix bug
* save temp to temp folder
* fix indexing bug & path
* do not always crreate folder
* Rename file
* add initcm reader
* add x0, y0, z0 transforms
* add initcm to halo cat
* docs update
* add initial KNN
* add attempt at init match
* add initial fiducial radius
* rm blank space
* Add further KNN Init pos support
* Add init radius support
* Remove message about the bug
* Get rid of an error msg
* purge mention of knn_init
* Add init CM distance calc
2022-12-16 11:18:16 +01:00
Richard Stiskalek
161c27d995
Particle match & file system & phase space ( #11 )
...
* Create file system
* add doc
* add n_sim n_snap directly to paths
* Move things to a single particle reader for consistency
* add docstring
* add srdcir, dumpdir and mmain_path
* make boxunits work with paths
* switch to using paths
* add tempdumpdir
* rm dependence on old functions
* rm comment
* rm unused import
* go back to all imports
* fix import bug
* rm dependence on old functions
* modernize code!
* fix typo
* fix typo
* update fits to new data structureing
* change docs
* add julia repo
* add setup
* add install commands
* ignore install files
* add array flattening
* update dependene
* add positions reader
* update manifest and projects
* add func
* update gitignore
* pos matching progress
* move file
* rm comment
* add velocities getter
* fix bug
* fix name bug
* fix path bug
* fix args func
* add redshift calculation to catalogues
* add shortcut to set n_sim and n_snap
* if cond bug
* add the cosine similarity
* add verbosit iterator
* add docs
* update README
* update README
* update README
2022-11-25 10:44:08 +00:00
Richard Stiskalek
c748c87e45
New filesystem, basic neighbours calculation ( #10 )
...
* simplify Planck catalogue
* add MCXC and base survey
* Add 2MPP classes
* move match to MCXC to Planck
* add halo catalogue
* rm comment
* rm unused imports
* Move conversion to box
* add min mass
* Run on all simulations
* rm old function
* add combined catalogue
* add halo positions
* add knn neighbors
* set to 5 sims for testing
* add docstring
* Switch to neighbours in a catalogue
* rename io to read
* fix indentation
* rename to read
* io -> read
* add import
* add RealisationMatcher
* io -> read
* add docstrings
* add search_sim_indiices
* update todo
* keep make_cat at 10 for now
* update nb
2022-11-22 10:00:01 +00:00
rstiskalek
6a9db75549
add pec redshift
2022-11-20 14:11:32 +00:00
rstiskalek
1037aa4db9
add velocity conversion
2022-11-18 10:53:06 +00:00
rstiskalek
858a153fad
add box2cosmoredshift
2022-11-18 10:44:41 +00:00
rstiskalek
859e3f4eb2
change density to mass/mpc^3
2022-11-06 10:06:40 +00:00
rstiskalek
0baa81a4f4
centre coords at 0
2022-11-06 09:06:03 +00:00
rstiskalek
3979650663
add boxunits transform on array
2022-11-06 06:32:28 +00:00
Richard Stiskalek
ba98ecc299
Mass enclosed in a sphere calculation ( #5 )
...
* rename nb
* add merge func
* rm bug..
* add static methods
* save rmin, rmax
* add properties for box units
* move radial info to the clump
* add Npart explicit
* move where rmin, rmax obtained
* add box cosmo
* add __getattr__
* add comments in units
* add enclosed spherical mass
* rm unused variables
* add clump mass setter
* add the halo index
* add enclosed overdensity
* add enclosed_overdensity
* simplify loss func
* opt result to nan
* change Rs to log10
* change back to attribs
* add H0 and h props
* add setattrs
* Remove global constants
* move Msuncgs above
* add crit density
* add dots
* add r200c and r500c
* add M200 and M500
* make lowercase
* output r200, r500, m200, m500
* update TODO
* update README
* fit NFW only up to r200
* add r178, m178
* add m178, r178
* update TODO
2022-11-01 10:10:54 +00:00
Richard Stiskalek
8a56c22813
Within halo work and NFW fit ( #4 )
...
* add listing of snapshots
* change distance to comoving
* ignore cp files
* rename nb
* add str to list
* add NFW profile shapes
* add fits imports
* Rename to Nsnap
* in clumps_read only select props
* make clumpid int
* expand doc
* add import
* edit readme
* distribute halos
* add profile & posterior
* add import
* add import
* add documentation
* add rvs and init guess
* update todo
* update nb
* add file
* return end index too
* change clump_ids format to int32
* skeleton of dump particle
* update nb
* add func to drop 0 clump indxs parts
* add import
* add halo dump
* switch to float32
* Update TODO
* update TODO
* add func that loads a split
* add halo object
* Rename to clump
* make post work with a clump
* add optimiser
* add Nsplits
* ignore submission scripts
* ignore .out
* add dumppath
* add job splitting
* add split halos script
* rename file
* renaem files
* rm file
* rename imports
* edit desc
* add pick clump
* add number of particles
* update TODO
* update todo
* add script
* add dumping
* change dumpdir structure
* change dumpdir
* add import
* Remove tqdm
* Increase the number of splits
* rm shuffle option
* Change to remove split
* add emojis
* fix part counts in splits
* change num of splits
* rm with particle cut
* keep splits
* fit only if 10 part and more
* add min distance
* rm warning about not set vels
* update TODO
* calculate rho0 too
* add results collection
* add import
* add func to combine splits
* update TODO
* add extract cols
* update nb
* update TODO
2022-10-30 20:16:56 +00:00
rstiskalek
ba15264eb8
Add docs
2022-10-21 19:58:59 +01:00
rstiskalek
a9e98f5a2d
Rename repo
2022-10-20 23:34:14 +01:00
