63 commits

Author	SHA1	Message	Date
P.M. Sutter	e5cc6297fa	consistent handling of comoving coords in sims	2014-02-12 04:52:58 -06:00
P.M. Sutter	59a94ffed8	setup for DR10	2014-02-11 12:27:32 -06:00
P.M. Sutter	5ab0a34129	estimate halo density taken from highest redshiftfor universal minVoidRadius	2014-02-10 03:23:41 -06:00
P.M. Sutter	a9e040540b	fixed bug in handling subhalos	2014-02-09 06:11:06 -06:00
Paul Matthew Sutter	8dbf8f8b54	fixed bug when loading halos	2014-02-03 15:48:15 +01:00
P.M. Sutter	b19fbca2ad	improved handling of SDF files	2014-02-03 04:40:50 -06:00
P.M. Sutter	f91b565d6f	fixed some bugs in density handling; now more flexible approach to SDF files	2014-01-23 21:05:07 -06:00
P.M. Sutter	4d853bbe09	added density thresholding for halos and galaxies in preparation scripts	2014-01-23 17:04:46 -06:00
Paul Matthew Sutter	65cfa8a073	cleaner handling of HOD errors	2014-01-14 11:36:19 +01:00
P.M. Sutter	a513603957	unique filenames for HOD output so scripts can be run in parallel	2014-01-10 10:33:08 -06:00
P.M. Sutter	385c0e65aa	more generic subprocess calling in preparation scripts	2014-01-09 15:05:31 -06:00
P.M. Sutter	3a4b636043	HOD code now callable from prepareCatalogs script	2013-12-31 08:20:56 -06:00
P.M. Sutter	f268820a2e	switched variable name useLCDM to less confusing useComoving; make it sample-level rather than dataset-level	2013-12-19 12:38:05 -06:00
P.M. Sutter	842c2beaaa	changed name in headers	2013-12-01 20:59:00 -06:00
P.M. Sutter	fa0d46c55a	moved all of sample_info printing to launchGenerate	2013-11-30 22:19:58 -06:00
P.M. Sutter	cde70952c4	added logarithmic binning for profiles	2013-11-18 08:00:19 -06:00
P.M. Sutter	0fb3a39b1c	fixed wrongly-placed closefile	2013-10-08 20:57:58 -05:00
P.M. Sutter	cd2bef15b3	stackVoidsZero now (partially) understands periodic boundaries	2013-07-12 03:15:13 -05:00
P.M. Sutter	9700f0d495	prepration script now pays attention to halo/subhalo distinction, and only takes halos	2013-06-29 05:20:15 -05:00
P.M. Sutter	4c97bcb798	halos and hod now only take parent halos	2013-06-19 06:47:56 -05:00
P.M. Sutter	ef5384c54b	prep script now estimates number of halos to get correct minimum threshold void size	2013-06-02 20:47:10 -05:00
P.M. Sutter	3e25f0c276	added dataset name which will be appended to sample nicknames; added descriptive nicknames to masked samples	2013-05-25 02:09:11 -05:00
P.M. Sutter	30655fedaf	fixed some bugs in halo handling	2013-05-07 13:43:45 -05:00
P.M. Sutter	195f19806a	halo files now have regularized names	2013-05-07 03:56:38 -05:00
P.M. Sutter	c088a87809	allow multiple stacks/slices for AP analysis within a redshift bin	2013-04-25 11:05:12 -05:00
P.M. Sutter	c81fd8913b	now outputs mass into particle and halo files	2013-04-25 09:35:32 -05:00
P.M. Sutter	7c6463ff8d	whoops, typed the variable name wrong	2013-04-23 07:42:23 -05:00
P.M. Sutter	76197f1196	prepareCatalogs now checks to see if subsampling is desired before actually subsampling...	2013-04-23 07:40:15 -05:00
P.M. Sutter	765b39ac63	more informative pipeline defaults.py file to describe how to handle particle files; option to do relative or absolute subsampling	2013-04-11 09:50:04 -05:00
P.M. Sutter	2c2426f662	prepareCatalogs now first loads a parameter file full of defaults	2013-04-06 21:39:08 -05:00
P.M. Sutter	94a4261bb9	switched to shorter 'parm' argument, more informative naming of subsamples	2013-03-28 21:31:16 -05:00
P.M. Sutter	b1dc0abc0c	can now do sdf subsampling (optionally) within prepareCatalogs	2013-03-21 21:51:29 -05:00
P.M. Sutter	25a6ead259	can now do subsampling of sdf in prepareCatalogs	2013-03-20 07:21:02 -05:00
P.M. Sutter	84fc94f471	HOD appears to work now with SDF format	2013-03-05 13:25:19 -06:00
P.M. Sutter	de9263b1d8	halo catalog prep appear to work with SDF format	2013-03-05 12:30:00 -06:00
P.M. Sutter	f7b4e5076b	restarting with multiple subsampling appears to work	2013-03-04 10:44:00 -06:00
P.M. Sutter	db6e80a343	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-03-03 21:00:47 -06:00
P.M. Sutter	29cb7a5a45	committing misc local edits before mergering with GPL'd versions	2013-03-03 21:00:37 -06:00
Guilhem Lavaux	5d9dad1439	Updated Copyright/License	2013-03-02 20:23:33 -05:00
Guilhem Lavaux	bce9ac1dd3	Removed the possibility of a later version. The patent mess is unclear.	2013-03-02 18:33:33 -05:00
Guilhem Lavaux	aa38661b65	Added copyright/license notice	2013-03-02 18:30:40 -05:00
P.M. Sutter	df98c86a03	modified scripts to work with new generateMock	2013-03-02 09:40:06 -06:00
P.M. Sutter	33cc210bbe	fixed issues with slicing in redshift or real space	2013-02-27 16:28:00 -06:00
P.M. Sutter	260385d9d0	fix to prepareCatalogs to correctly handle non-lightconed outputs	2013-02-25 23:04:24 -06:00
P.M. Sutter	a7c352975c	signal end of script in prepareCatalogs	2013-02-25 14:33:14 -06:00
P.M. Sutter	dd68b1f91c	harmonized subsample defition between generateMock and prepareCatalogs	2013-02-18 08:28:26 -06:00
P.M. Sutter	1a62f691ef	removed the maxkeep criterion in subsampling	2013-02-18 07:11:27 -06:00
P.M. Sutter	3a12e32f2c	scripts now report status even when running in background	2013-02-15 13:48:04 -06:00
P.M. Sutter	ee87db1517	added ability to do many HOD runs easily	2013-02-11 14:17:39 -06:00
P.M. Sutter	168ef7a0d7	merged guilhem's and my updates	2013-02-09 14:12:40 -06:00