80 commits

Author	SHA1	Message	Date
P.M. Sutter	842c2beaaa	changed name in headers	2013-12-01 20:59:00 -06:00
P.M. Sutter	1274573b01	added import of pickle	2013-11-30 22:22:04 -06:00
P.M. Sutter	fa0d46c55a	moved all of sample_info printing to launchGenerate	2013-11-30 22:19:58 -06:00
P.M. Sutter	4cdcb2f48b	fixed bug in overlap launcher	2013-11-24 16:00:15 -06:00
P.M. Sutter	1335f3688e	sample_info.txt file now includes # tracer, volume info	2013-10-14 06:49:49 -05:00
P.M. Sutter	5ea91f12f5	temporary commit to check adjacencies in voids	2013-10-10 13:00:05 -05:00
P.M. Sutter	5c4be39a99	parameters added to scripts to handle real-space analysis	2013-09-06 14:56:46 -05:00
P.M. Sutter	7ba3b2a98d	prunevoids now can handle coordinate changes to cosmoving space in observations	2013-08-23 13:13:55 -05:00
P.M. Sutter	fd2c5742b2	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-06-29 05:27:06 -05:00
P.M. Sutter	0baf14fc48	voidoverlap now matched top-level -> any-level	2013-06-29 05:25:59 -05:00
Guilhem Lavaux	789e871a13	Updated launchers to follow the new location of jozov2	2013-06-11 11:58:29 +02:00
P.M. Sutter	ae7b69f3ca	joggling in generateMock now disabled by default	2013-05-07 03:40:58 -05:00
P.M. Sutter	9a2588ddf6	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-05-06 03:47:50 -05:00
P.M. Sutter	7a602ee8c4	updates to launchers	2013-05-06 03:47:42 -05:00
P.M. Sutter	1980fdd5d1	added joggling of input particles	2013-05-03 14:44:40 -04:00
P.M. Sutter	9c26996591	passing ellipticity file to voidOverlap	2013-04-28 14:20:19 -05:00
P.M. Sutter	0cc5529b08	checking for periodicity now pushed to function	2013-04-25 18:13:24 -05:00
P.M. Sutter	dbc4c87c3e	removed a few extraneous checks in launchers	2013-04-11 09:53:01 -05:00
P.M. Sutter	3b7b1dd4d2	void overlap analysis now uses untrimmed catalog by default	2013-04-01 13:04:40 -05:00
P.M. Sutter	2e832dd415	void overlap now gets barycenters from center_ file rather than barycenter_ file	2013-03-31 22:04:27 -05:00
P.M. Sutter	151c605335	pruneVoids now cleans out non-leaf voids; adjusted stackVoidsZero launcher to accept custom stacks	2013-03-30 15:24:45 -05:00
P.M. Sutter	afb562d419	once again, fixed bug in periodic boundary detection...	2013-03-24 16:06:01 -05:00
P.M. Sutter	8043742123	added script to compare stacks and radial profiles of matched voids	2013-03-23 11:50:17 -05:00
P.M. Sutter	60965e1fa4	multiple levels of subsampling now correctly handled	2013-03-21 21:54:56 -05:00
P.M. Sutter	7c172d5642	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-03-20 07:19:34 -05:00
P.M. Sutter	7c16c9477f	more correct handling of multiple subsample levels	2013-03-20 07:19:25 -05:00
Guilhem Lavaux	444cd8dad4	Added explanatory exception instead of a cryptic error for sample.dataFormat	2013-03-19 20:35:42 +01:00
P.M. Sutter	f7b4e5076b	restarting with multiple subsampling appears to work	2013-03-04 10:44:00 -06:00
P.M. Sutter	db6e80a343	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-03-03 21:00:47 -06:00
P.M. Sutter	af4f6cf41e	fixed bug where netcdf files weren't properly closed	2013-03-02 21:51:05 -06:00
Guilhem Lavaux	5d9dad1439	Updated Copyright/License	2013-03-02 20:23:33 -05:00
Guilhem Lavaux	bce9ac1dd3	Removed the possibility of a later version. The patent mess is unclear.	2013-03-02 18:33:33 -05:00
Guilhem Lavaux	aa38661b65	Added copyright/license notice	2013-03-02 18:30:40 -05:00
Guilhem Lavaux	e9194f5c55	Merge branch 'master' of bitbucket.org:cosmicvoids/void_identification	2013-03-02 10:45:10 -06:00
Guilhem Lavaux	51c409a170	Maybe incorrect maxCentralDensity ?	2013-03-02 10:45:08 -06:00
P.M. Sutter	df98c86a03	modified scripts to work with new generateMock	2013-03-02 09:40:06 -06:00
P.M. Sutter	f8c8beafd0	first attempt at doing multiple subsampling with generateMock	2013-03-01 10:31:07 -06:00
Guilhem Lavaux	f12ed039e5	Fixed compile error in development code stackVelocityField	2013-02-27 13:16:09 -06:00
Guilhem Lavaux	c6dd08bd7d	Merge branch 'master' of https://bitbucket.org/cosmicvoids/void_identification	2013-02-26 17:46:11 -05:00
P.M. Sutter	343250de42	removed spurius line from launchPrune	2013-02-25 15:32:08 -06:00
P.M. Sutter	fa7264e4ee	cleaned up logic and output handling in prunevoids; added combined SDSS analysis script; added data preparation scripts	2013-02-25 12:30:24 -06:00
Guilhem Lavaux	ecb4479178	Merge branch 'master' of https://bitbucket.org/cosmicvoids/void_identification	2013-02-24 14:15:34 -05:00
Guilhem Lavaux	e0c2862d2c	Added some velocity field stacking support	2013-02-24 14:15:21 -05:00
P.M. Sutter	0b4644471a	fixed combining stacks with zobov cuts	2013-02-11 19:29:50 -06:00
P.M. Sutter	168ef7a0d7	merged guilhem's and my updates	2013-02-09 14:12:40 -06:00
P.M. Sutter	950c6e810a	start of shape measurement in void outputs; some improvements and bug fixes to AP analysis	2013-02-09 14:08:44 -06:00
Guilhem Lavaux	116cd950e3	Added support for regeneration (to finely test impact of peculiar velocities)	2013-01-29 14:02:00 -06:00
P.M. Sutter	ae9701e99c	replaced void shape fitter with rudimentary moment of inertia calculation	2013-01-18 09:56:31 -06:00
P.M. Sutter	e9b2697bc7	fixed printout of subsampling	2012-12-19 08:11:43 -06:00
P.M. Sutter	8a4191972b	more updates to preparation scripts	2012-12-18 12:13:06 -06:00