mirror of
https://bitbucket.org/cosmicvoids/vide_public.git
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Added copyright/license notice
This commit is contained in:
parent
edd9c2a45d
commit
aa38661b65
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@ -1,3 +1,23 @@
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/*+
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||||||
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VIDE -- Void IDEntification pipeline -- ./c_tools/analysis/voidOverlap.cpp
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Copyright (C) 2010-2013 Guilhem Lavaux
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||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
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||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
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||||||
|
+*/
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||||||
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||||||
// =============================================================================
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// =============================================================================
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||||||
//
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//
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// Program: voidOverlap
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// Program: voidOverlap
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@ -1,3 +1,23 @@
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/*+
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||||||
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VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/contour_pixels.cpp
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||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
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||||||
|
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#include <vector>
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#include <vector>
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#include <healpix_map.h>
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#include <healpix_map.h>
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#include <healpix_map_fitsio.h>
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#include <healpix_map_fitsio.h>
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@ -1,3 +1,23 @@
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||||||
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/*+
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||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/contour_pixels.hpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
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||||||
|
|
||||||
#ifndef __CONTOUR_PIXELS_HPP
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#ifndef __CONTOUR_PIXELS_HPP
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||||||
#define __CONTOUR_PIXELS_HPP
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#define __CONTOUR_PIXELS_HPP
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||||||
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||||||
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@ -1,3 +1,23 @@
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||||||
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/*+
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||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/gslIntegrate.hpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
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||||||
|
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#ifndef __MYGSL_INTEGRATE_HPP
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#ifndef __MYGSL_INTEGRATE_HPP
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||||||
#define __MYGSL_INTEGRATE_HPP
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#define __MYGSL_INTEGRATE_HPP
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||||||
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||||||
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@ -1,3 +1,23 @@
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||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/loadZobov.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <cassert>
|
#include <cassert>
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||||||
#include <string>
|
#include <string>
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||||||
#include <fstream>
|
#include <fstream>
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||||||
|
|
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@ -1,3 +1,23 @@
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||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/loadZobov.hpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#ifndef __LOAD_ZOBOV_HPP
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#ifndef __LOAD_ZOBOV_HPP
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||||||
#define __LOAD_ZOBOV_HPP
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#define __LOAD_ZOBOV_HPP
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|
|
||||||
|
|
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@ -1,3 +1,23 @@
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|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/particleInfo.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <cstdlib>
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#include <cstdlib>
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||||||
#include <netcdfcpp.h>
|
#include <netcdfcpp.h>
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||||||
#include <CosmoTool/fortran.hpp>
|
#include <CosmoTool/fortran.hpp>
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||||||
|
|
|
@ -1,3 +1,23 @@
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||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/particleInfo.hpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#ifndef _PARTICLE_INFO_HEADER_HPP
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#ifndef _PARTICLE_INFO_HEADER_HPP
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||||||
#define _PARTICLE_INFO_HEADER_HPP
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#define _PARTICLE_INFO_HEADER_HPP
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|
|
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|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/voidTree.hpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#ifndef _VOID_TREE_HPP
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#ifndef _VOID_TREE_HPP
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||||||
#define _VOID_TREE_HPP
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#define _VOID_TREE_HPP
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||||||
|
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/generateFromCatalog.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <healpix_map.h>
|
#include <healpix_map.h>
|
||||||
#include <healpix_map_fitsio.h>
|
#include <healpix_map_fitsio.h>
|
||||||
#include <boost/format.hpp>
|
#include <boost/format.hpp>
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/generateMock.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <gsl/gsl_rng.h>
|
#include <gsl/gsl_rng.h>
|
||||||
#include <boost/function.hpp>
|
#include <boost/function.hpp>
|
||||||
#include <boost/bind.hpp>
|
#include <boost/bind.hpp>
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/generateTestMock.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <iostream>
|
#include <iostream>
|
||||||
#include <cstdlib>
|
#include <cstdlib>
|
||||||
#include <CosmoTool/fortran.hpp>
|
#include <CosmoTool/fortran.hpp>
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/basic_loader.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <cassert>
|
#include <cassert>
|
||||||
#include <string>
|
#include <string>
|
||||||
#include <iostream>
|
#include <iostream>
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/flash_loader.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <cassert>
|
#include <cassert>
|
||||||
#include <string>
|
#include <string>
|
||||||
#include <CosmoTool/loadFlash.hpp>
|
#include <CosmoTool/loadFlash.hpp>
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/gadget_loader.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <vector>
|
#include <vector>
|
||||||
#include <cassert>
|
#include <cassert>
|
||||||
#include <string>
|
#include <string>
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/multidark_loader.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <cassert>
|
#include <cassert>
|
||||||
#include <string>
|
#include <string>
|
||||||
#include <fstream>
|
#include <fstream>
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/ramses_loader.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <cassert>
|
#include <cassert>
|
||||||
#include <string>
|
#include <string>
|
||||||
#include <CosmoTool/loadRamses.hpp>
|
#include <CosmoTool/loadRamses.hpp>
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/sdf_loader.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <iostream>
|
#include <iostream>
|
||||||
#include <boost/format.hpp>
|
#include <boost/format.hpp>
|
||||||
#include <vector>
|
#include <vector>
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/sdfloader_internal.hpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#ifndef __VOID_SDF_LOADER_INTERNAL_HPP
|
#ifndef __VOID_SDF_LOADER_INTERNAL_HPP
|
||||||
#define __VOID_SDF_LOADER_INTERNAL_HPP
|
#define __VOID_SDF_LOADER_INTERNAL_HPP
|
||||||
|
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/simulation_loader.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#include <cmath>
|
#include <cmath>
|
||||||
#include <CosmoTool/loadSimu.hpp>
|
#include <CosmoTool/loadSimu.hpp>
|
||||||
#include "simulation_loader.hpp"
|
#include "simulation_loader.hpp"
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/simulation_loader.hpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
#ifndef _MOCK_SIMULATION_LOADER_HPP
|
#ifndef _MOCK_SIMULATION_LOADER_HPP
|
||||||
#define _MOCK_SIMULATION_LOADER_HPP
|
#define _MOCK_SIMULATION_LOADER_HPP
|
||||||
|
|
||||||
|
|
|
@ -1,3 +1,23 @@
|
||||||
|
/*+
|
||||||
|
VIDE -- Void IDEntification pipeline -- ./c_tools/stacking/pruneVoids.cpp
|
||||||
|
Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
+*/
|
||||||
|
|
||||||
// Reads in the void catalog and removes any void that could potentially
|
// Reads in the void catalog and removes any void that could potentially
|
||||||
// be affected by a mock particle. It does this by computing the longest
|
// be affected by a mock particle. It does this by computing the longest
|
||||||
// particle distance within each void and comparing it to the distance
|
// particle distance within each void and comparing it to the distance
|
||||||
|
|
19
crossCompare/analysis/datasetsToAnalyze.py
Executable file → Normal file
19
crossCompare/analysis/datasetsToAnalyze.py
Executable file → Normal file
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./crossCompare/analysis/datasetsToAnalyze.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
#!/usr/bin/env python
|
#!/usr/bin/env python
|
||||||
|
|
||||||
|
|
||||||
|
|
19
crossCompare/analysis/mergerTree.py
Executable file → Normal file
19
crossCompare/analysis/mergerTree.py
Executable file → Normal file
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./crossCompare/analysis/mergerTree.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
#!/usr/bin/env python
|
#!/usr/bin/env python
|
||||||
|
|
||||||
# plots cumulative distributions of number counts
|
# plots cumulative distributions of number counts
|
||||||
|
|
19
crossCompare/plotting/datasetsToPlot.py
Executable file → Normal file
19
crossCompare/plotting/datasetsToPlot.py
Executable file → Normal file
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./crossCompare/plotting/datasetsToPlot.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
#!/usr/bin/env python
|
#!/usr/bin/env python
|
||||||
|
|
||||||
|
|
||||||
|
|
19
crossCompare/plotting/plotCompareDensCon.py
Executable file → Normal file
19
crossCompare/plotting/plotCompareDensCon.py
Executable file → Normal file
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./crossCompare/plotting/plotCompareDensCon.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
#!/usr/bin/env python
|
#!/usr/bin/env python
|
||||||
|
|
||||||
# plots cumulative distributions of number counts versus density contrast
|
# plots cumulative distributions of number counts versus density contrast
|
||||||
|
|
19
crossCompare/plotting/plotDensConVsR.py
Executable file → Normal file
19
crossCompare/plotting/plotDensConVsR.py
Executable file → Normal file
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./crossCompare/plotting/plotDensConVsR.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
#!/usr/bin/env python
|
#!/usr/bin/env python
|
||||||
|
|
||||||
# plots cumulative distributions of number counts versus density contrast
|
# plots cumulative distributions of number counts versus density contrast
|
||||||
|
|
19
crossCompare/plotting/plotNumberFunc.py
Executable file → Normal file
19
crossCompare/plotting/plotNumberFunc.py
Executable file → Normal file
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./crossCompare/plotting/plotNumberFunc.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
#!/usr/bin/env python
|
#!/usr/bin/env python
|
||||||
|
|
||||||
# plots cumulative distributions of number counts
|
# plots cumulative distributions of number counts
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./pipeline/datasets/mock_dr9mid.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
import os
|
import os
|
||||||
|
|
||||||
# -----------------------------------------------------------------------------
|
# -----------------------------------------------------------------------------
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./pipeline/datasets/multidark.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
import os
|
import os
|
||||||
|
|
||||||
# -----------------------------------------------------------------------------
|
# -----------------------------------------------------------------------------
|
||||||
|
|
19
pipeline/generateCatalog.py
Executable file → Normal file
19
pipeline/generateCatalog.py
Executable file → Normal file
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./pipeline/generateCatalog.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
#!/usr/bin/env python
|
#!/usr/bin/env python
|
||||||
|
|
||||||
# does full void analysis. Also generates 2d/1d stacked plots and hubble diagram
|
# does full void analysis. Also generates 2d/1d stacked plots and hubble diagram
|
||||||
|
|
19
python_tools/pipeline_source/prepareCatalogs.in.py
Executable file → Normal file
19
python_tools/pipeline_source/prepareCatalogs.in.py
Executable file → Normal file
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/pipeline_source/prepareCatalogs.in.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
#!/usr/bin/env python
|
#!/usr/bin/env python
|
||||||
|
|
||||||
# prepares input catalogs based on multidark simulations
|
# prepares input catalogs based on multidark simulations
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/setup.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
from distutils.core import setup
|
from distutils.core import setup
|
||||||
from distutils.extension import Extension
|
from distutils.extension import Extension
|
||||||
from Cython.Distutils import build_ext
|
from Cython.Distutils import build_ext
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/__init__.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
from void_python_tools.backend import *
|
from void_python_tools.backend import *
|
||||||
from void_python_tools.apTools import *
|
from void_python_tools.apTools import *
|
||||||
from void_python_tools.plotting import *
|
from void_python_tools.plotting import *
|
||||||
|
|
|
@ -1,2 +1,21 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/apTools/__init__.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
from chi2 import *
|
from chi2 import *
|
||||||
from profiles import *
|
from profiles import *
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/apTools/chi2/__init__.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
from velocityProfileFitNative import *
|
from velocityProfileFitNative import *
|
||||||
from likelihood import *
|
from likelihood import *
|
||||||
from cosmologyTools import *
|
from cosmologyTools import *
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/apTools/chi2/cosmologyTools.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
# a suite of functions to compute expansion rates, angular diameter
|
# a suite of functions to compute expansion rates, angular diameter
|
||||||
# distances, and expected void stretching
|
# distances, and expected void stretching
|
||||||
|
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/apTools/profiles/__init__.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
from build import *
|
from build import *
|
||||||
from draw import *
|
from draw import *
|
||||||
from fit import *
|
from fit import *
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/apTools/profiles/getSurveyProps.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
import numpy as np
|
import numpy as np
|
||||||
import healpy as healpy
|
import healpy as healpy
|
||||||
import scipy.integrate
|
import scipy.integrate
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/backend/__init__.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
from classes import *
|
from classes import *
|
||||||
from launchers import *
|
from launchers import *
|
||||||
from catalogPrep import *
|
from catalogPrep import *
|
||||||
|
|
19
python_tools/void_python_tools/backend/classes.py
Executable file → Normal file
19
python_tools/void_python_tools/backend/classes.py
Executable file → Normal file
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/backend/classes.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
# classes and routines used to support scripts
|
# classes and routines used to support scripts
|
||||||
|
|
||||||
import os
|
import os
|
||||||
|
|
19
python_tools/void_python_tools/backend/launchers.py
Executable file → Normal file
19
python_tools/void_python_tools/backend/launchers.py
Executable file → Normal file
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/backend/launchers.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
# -----------------------------------------------------------------------------
|
# -----------------------------------------------------------------------------
|
||||||
# -----------------------------------------------------------------------------
|
# -----------------------------------------------------------------------------
|
||||||
# routines which communicate with individual data analysis portions -
|
# routines which communicate with individual data analysis portions -
|
||||||
|
|
|
@ -1,2 +1,21 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/plotting/__init__.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
from plotTools import *
|
from plotTools import *
|
||||||
from plotDefs import *
|
from plotDefs import *
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/plotting/plotDefs.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
LIGHT_SPEED = 299792.458
|
LIGHT_SPEED = 299792.458
|
||||||
|
|
||||||
colorList = ['r', 'b', 'g', 'y', 'c', 'm',
|
colorList = ['r', 'b', 'g', 'y', 'c', 'm',
|
||||||
|
|
|
@ -1,3 +1,22 @@
|
||||||
|
#+
|
||||||
|
# VIDE -- Void IDEntification pipeline -- ./python_tools/void_python_tools/plotting/plotTools.py
|
||||||
|
# Copyright (C) 2010-2013 Guilhem Lavaux
|
||||||
|
# Copyright (C) 2011-2013 Paul M. Sutter
|
||||||
|
#
|
||||||
|
# This program is free software; you can redistribute it and/or modify
|
||||||
|
# it under the terms of the GNU General Public License as published by
|
||||||
|
# the Free Software Foundation; either version 2 of the License, or
|
||||||
|
# (at your option) any later version.
|
||||||
|
#
|
||||||
|
# This program is distributed in the hope that it will be useful,
|
||||||
|
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
# GNU General Public License for more details.
|
||||||
|
#
|
||||||
|
# You should have received a copy of the GNU General Public License along
|
||||||
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
#+
|
||||||
__all__=['plotRedshiftDistribution', 'plotSizeDistribution', 'plot1dProfiles',
|
__all__=['plotRedshiftDistribution', 'plotSizeDistribution', 'plot1dProfiles',
|
||||||
'plotMarg1d', 'plotNumberDistribution']
|
'plotMarg1d', 'plotNumberDistribution']
|
||||||
|
|
||||||
|
|
Loading…
Add table
Add a link
Reference in a new issue