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9e4b34f579
* Update README * Update density field reader * Update name of SDSSxALFAFA * Fix quick bug * Add little fixes * Update README * Put back fit_init * Add paths to initial snapshots * Add export * Remove some choices * Edit README * Add Jens' comments * Organize imports * Rename snapshot * Add additional print statement * Add paths to initial snapshots * Add masses to the initial files * Add normalization * Edit README * Update README * Fix bug in CSiBORG1 so that does not read fof_00001 * Edit README * Edit README * Overwrite comments * Add paths to init lag * Fix Quijote path * Add lagpatch * Edit submits * Update README * Fix numpy int problem * Update README * Add a flag to keep the snapshots open when fitting * Add a flag to keep snapshots open * Comment out some path issue * Keep snapshots open * Access directly snasphot * Add lagpatch for CSiBORG2 * Add treatment of x-z coordinates flipping * Add radial velocity field loader * Update README * Add lagpatch to Quijote * Fix typo * Add setter * Fix typo * Update README * Add output halo cat as ASCII * Add import * Add halo plot * Update README * Add evaluating field at radial distanfe * Add field shell evaluation * Add enclosed mass computation * Add BORG2 import * Add BORG boxsize * Add BORG paths * Edit run * Add BORG2 overdensity field * Add bulk flow clauclation * Update README * Add new plots * Add nbs * Edit paper * Update plotting * Fix overlap paths to contain simname * Add normalization of positions * Add default paths to CSiBORG1 * Add overlap path simname * Fix little things * Add CSiBORG2 catalogue * Update README * Add import * Add TNG density field constructor * Add TNG density * Add draft of calculating BORG ACL * Fix bug * Add ACL of enclosed density * Add nmean acl * Add galaxy bias calculation * Add BORG acl notebook * Add enclosed mass calculation * Add TNG300-1 dir * Add TNG300 and BORG1 dir * Update nb
3.7 KiB
3.7 KiB
CSiBORG Tools
Tools for analysing the suite of Constrained Simulations in BORG (CSiBORG) simulations. The interface is designed to work with the following suites of simulations: CSiBORG1 (dark matter-only RAMSES), CSiBORG2 (dark matter-only Gadget4), Quijote (dark-matter only Gadget2), however with little effort it can support other simulations as well.
Ongoing projects
Data to calculate
- Process all CSiBORG1 snapshots (running).
- Calculate halo properties for CSiBORG1
- Calculate initial properties for CSiBORG1
- Calculate halo properties for CSiBORG2
- Calculate initial properties for CSiBORG2
- Process all Quijote simulations.
- Calculate halo properties for Quijote
- Calculate initial properties for Quijote
General
- Add new halo properties to the catalogues.
- Add initial halo properties to the catalogues.
- Add a new flag for flipping x- and z-coordinates fro catalogues, snapshots and field readers.
- Add radial velocity field loader.
Consistent halo reconstruction
- Make a sketch of the overlap definition and add it to the paper.
- Re-calculate the overlaps for CSiBORG1, Quijote and CSiBORG2
- Fix the script to calculate the initial lagrangian positions etc.
Enviromental dependence of galaxy properties
- Prepare the CSiBORG one particle files for SPH.
- Transfer, calculate the SPH density field for CSiBORG1 and transfer back.
- Check that the velocity-field flipping of x and z coordinates is correct.
- Evaluate and share the density field for SDSS and SDSSxALFALFA for both CSiBORG2 and random fields.
- Check and verify the density field of galaxy colours (cannot do this now! Glamdring is super slow.)
- Calculate the radial velocity field for random realizations (submitted)
- Send Catherine concatenated data.
- Start analyzing DiSPERSE results.
Mass-assembly of massive clusters
- Make a list of nearby most-massive clusters.
- Write code to identify a counterpart of such clusters.
- Write code to make a plot of mass-assembly of all clusters within a certain mass range from the random simulations.
- Write code to compare mass-assembly of a specific cluster with respect to random ones.
Effect of small-scale noise
- Study how the small-scale noise variation affects the overlap measure, halo concentration and spin.
- Add uncertainty on the halo concentration.
Gravitational-wave and large-scale structure
- Validate the velocity field results agains Supranta data sets.
- Write code to estimate the enclosed mass and bulk flow.
- Write code to estimate the average radial velocity in a spherical shell.
- Write code to calculate the power spectrum of velocities.
- Estimate the amplitude of the velocity field in radial shells around the observer, estimate analogous results for random simulations, and see if they agree within cosmic variance.
- Calculate power spectra of velocities and maybe velocity dispersion.
- Make the velocity field data available.
CSiBORG meets X-ray
- Make available one example snapshot from the simulation. Mention the issue with x- and z-coordinates.
- Answer Johan and make a comparison to the Planck clusters.
CSiBORG advertising
- Decide on the webpage design and what to store there.
- Write a short letter describing the simulations.
Calculated data
Enclosed mass & bulk velocity
- CSiBORG2_main, CSiBORG2_varysmall, CSiBORG2_arandom
SPH-density & velocity field
- CSiBORG2_main, CSiBORG2_random, CSiBORG2_varysmall
- Evaluated for SDSS and SDSSxALFALFA in: CSiBORG2_main, CSiBORG2_random
Radial velocity field
- *CSiBORG2_main, CSiBORG2_random