mirror of
https://github.com/Richard-Sti/csiborgtools.git
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9e4b34f579
* Update README * Update density field reader * Update name of SDSSxALFAFA * Fix quick bug * Add little fixes * Update README * Put back fit_init * Add paths to initial snapshots * Add export * Remove some choices * Edit README * Add Jens' comments * Organize imports * Rename snapshot * Add additional print statement * Add paths to initial snapshots * Add masses to the initial files * Add normalization * Edit README * Update README * Fix bug in CSiBORG1 so that does not read fof_00001 * Edit README * Edit README * Overwrite comments * Add paths to init lag * Fix Quijote path * Add lagpatch * Edit submits * Update README * Fix numpy int problem * Update README * Add a flag to keep the snapshots open when fitting * Add a flag to keep snapshots open * Comment out some path issue * Keep snapshots open * Access directly snasphot * Add lagpatch for CSiBORG2 * Add treatment of x-z coordinates flipping * Add radial velocity field loader * Update README * Add lagpatch to Quijote * Fix typo * Add setter * Fix typo * Update README * Add output halo cat as ASCII * Add import * Add halo plot * Update README * Add evaluating field at radial distanfe * Add field shell evaluation * Add enclosed mass computation * Add BORG2 import * Add BORG boxsize * Add BORG paths * Edit run * Add BORG2 overdensity field * Add bulk flow clauclation * Update README * Add new plots * Add nbs * Edit paper * Update plotting * Fix overlap paths to contain simname * Add normalization of positions * Add default paths to CSiBORG1 * Add overlap path simname * Fix little things * Add CSiBORG2 catalogue * Update README * Add import * Add TNG density field constructor * Add TNG density * Add draft of calculating BORG ACL * Fix bug * Add ACL of enclosed density * Add nmean acl * Add galaxy bias calculation * Add BORG acl notebook * Add enclosed mass calculation * Add TNG300-1 dir * Add TNG300 and BORG1 dir * Update nb
829 KiB
829 KiB
In [1]:
from os.path import join
import csiborgtools
import healpy
import matplotlib.pyplot as plt
import numpy
import scienceplots
from cache_to_disk import cache_to_disk, delete_disk_caches_for_function
from h5py import File
import plt_utils
%load_ext autoreload
%autoreload 2
In [8]:
@cache_to_disk(30)
def _plot_sky_projected_density(nsim, simname, grid, nside, MAS, survey_name,
dmin, dmax):
paths = csiborgtools.read.Paths(**csiborgtools.paths_glamdring)
boxsize = csiborgtools.simname2boxsize(simname)
if simname == "csiborg1":
reader = csiborgtools.read.CSiBORG1Field(nsim, paths)
elif "csiborg2" in simname:
kind = simname.split("_")[-1]
reader = csiborgtools.read.CSiBORG2Field(nsim, kind, paths)
else:
raise ValueError(f"Unknown simname `{simname}`.")
field = reader.density_field(MAS, grid)
if survey_name == "2M++":
survey = csiborgtools.read.TwoMPPGalaxies()
dist = survey["ZCMB"] * 3e5 / 100
ra, dec = survey["RA"], survey["DEC"]
ra *= numpy.pi / 180
dec *= numpy.pi / 180
elif survey_name == "SDSS":
survey = csiborgtools.SDSS()()
dist = survey["DIST"]
ra, dec = survey["RA"], survey["DEC"]
ra *= numpy.pi / 180
dec *= numpy.pi / 180
elif survey_name == "csiborg2":
cat = csiborgtools.read.CSiBORG2Catalogue(
nsim, 99, "main", paths, bounds={"totmass": (1e12, None)})
coord = cat["spherical_pos"]
dist, ra, dec = coord[:, 0], coord[:, 1], coord[:, 2]
ra *= numpy.pi / 180
dec *= numpy.pi / 180
else:
raise ValueError(f"Unknown survey name `{survey_name}`.")
mask = (dist > dmin) & (dist < dmax)
ra = ra[mask]
dec = dec[mask]
angpos = csiborgtools.field.nside2radec(nside)
dist = numpy.linspace(dmin, dmax, 1000)
dmap = csiborgtools.field.make_sky(field, angpos=angpos, dist=dist,
boxsize=boxsize)
return dmap, ra, dec
In [9]:
def plot_sky_projected_density(nsim, simname, grid, nside, MAS="PCS",
dmin=0, dmax=220, survey_name="2M++",
ext="png", to_save=False):
dmap, ra, dec = _plot_sky_projected_density(
nsim, simname, grid, nside, MAS, survey_name, dmin, dmax)
with plt.style.context(plt_utils.mplstyle):
healpy.mollview(numpy.log10(dmap), fig=0, title="", unit="", rot=90)
healpy.projscatter(numpy.pi / 2 - dec, ra, s=0.05, c="red",
label="2M++ galaxies")
if to_save:
fout = join(plt_utils.fout, f"sky_density_{simname}_{nsim}_from_{dmin}_to_{dmax}.{ext}") # noqa
print(f"Saving to `{fout}`.")
plt.savefig(fout, dpi=plt_utils.dpi, bbox_inches="tight")
plt.show()
In [3]:
In [10]:
# delete_disk_caches_for_function("_plot_sky_projected_density")
plot_sky_projected_density(15517, "csiborg2_main", 1024, 128, "SPH", dmin=100,
dmax=125, survey_name="csiborg2", to_save=True)
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