csiborgtools/scripts_plots/paper_environment.ipynb
Richard Stiskalek eb1797e8a9
Clean density calculation (#97)
* Get rid of utils

* Clean up imports

* Move some utils here

* Rename file

* Add simname to boxsize

* Add imports

* Delete old files

* Update README

* Update imports

* Add a new draft of the density calculator

* Update fields

* Draft of new density field calculatiosn

* Add snapshot

* Add boxsizes

* Little updates

* Bring back utils

* Edit docstrings

* Edits imports

* Add progress on snapshots

* edit improts

* add basic snapshot catalogue

* Add support for CSiBORG2 snapshot reader

* add paths to fofcat for csiborg2

* Add more imports

* Add more boxsize

* Add more imports

* Add field readers

* Simplify field paths

* Fix typo

* Add observer vp

* Clean up density field calculation

* Add a short note

* Edit args

* Remove old comments

* Edit docs

* Remove blank line

* Stop flipping RAMSES

* Remove comment

* Edit desc

* Remove normalization

* Remove old dist array

* Remove non-volume weighting

* Remove non-volume weight

* Add ignore of flake8 notebooks

* Fix path typo

* Fix units

* Edit paths docs

* Update nb
2023-12-18 18:09:08 +01:00

764 KiB

In [1]:
import matplotlib.pyplot as plt
import numpy
import scienceplots
from h5py import File

import plt_utils


%load_ext autoreload
%autoreload 2
In [12]:
with File("/mnt/extraspace/rstiskalek/csiborg_postprocessing/ACL/BORG2_0.25.hdf5", 'r') as f:
    voxel_acl = f['voxel_acl'][...].flatten()
    voxel_dist = f['voxel_dist'][...].flatten()
In [28]:
bins = numpy.linspace(0, 100, 10)


plt.figure()

mask = voxel_dist < 20
plt.hist(voxel_acl[mask], bins="auto", histtype='step', density=1, label=r"$0 < R / (\mathrm{Mpc} / h)  < 20$")

mask = (voxel_dist > 20) & (voxel_dist < 40)
plt.hist(voxel_acl[mask], bins="auto", histtype='step', density=1, label=r"$20 < R / (\mathrm{Mpc} / h)  < 40$")

mask = (voxel_dist > 40) & (voxel_dist < 60)
plt.hist(voxel_acl[mask], bins="auto", histtype='step', density=1, label=r"$40 < R / (\mathrm{Mpc} / h)  < 60$")

# plt.scatter(voxel_dist.flatten(), voxel_acl.flatten(), s=0.1)
plt.legend()
plt.title("ACL of individual voxels")
plt.xlabel(r"$\mathrm{ACL}$")
plt.ylabel(r"Normalized bin counts")

plt.tight_layout()
plt.savefig("../plots/BORG_Stephen_ACL.png", dpi=450)
plt.show()
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In [ ]: