csiborgtools/README.md
Richard Stiskalek 7f58b1f78c
JAX and fix conc (#6)
* change to log10 initlogRs

* add uncertainty

* add check if hessian negative

* update TODO

* update TODO

* output the error too

* save e_logRs

* add concentration calculation

* calcul concentration

* missed comma in a list

* Update TODO

* fix bug

* add box units and pretty status

* make uncertainty optional

* add BIC function

* remove BIC again

* add new overdensity calculation

* change defualt values to max dist and mass

* change to r200

* new halo find

* speed up the calculation

* add commented fucn

* update TODO

* add check whether too close to outside boundary

* Update TODO

* extract velocity as well

* calculate m200 and m500

* update nb

* update TODO
2022-11-05 21:17:05 +00:00

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# CSiBORG tools
## :scroll: Short-term TODO
- [ ] Calculate mass functions
- [ ] Add functions for converting the output file to box units.
- [ ] Calculate catalogues for all realisations.
- [x] Verify the bulk flow of particles and the clump
- [x] Check why for some halos $M_{500c} > M_{200c}$
## :hourglass: Long-term TODO
- [ ] Improve file naming system
- [ ] Calculate the cross-correlation in CSiBORG. Should see the scale of the constraints?
## :bulb: Open questions
- Propagate uncertainty of $\log R_{\rm s}$ to concentration