Commit Graph

11 Commits

Author SHA1 Message Date
Richard Stiskalek
fb4b4edf19
Quijote snapshots support (#77)
* Renaming

* Edit docs

* Delete old function

* Add a blank space

* Rename particle reader

* Add comments

* Rename

* Rename

* edit get_snapshots

* More renaming

* Remove old correction

* Add import

* Add basics of the Quijote reader

* Add a blank space

* Fix paths

* Rename function

* Fix HID and path

* Add more FoF reading

* Move definition

* Adding arguments

* Renaming

* Add kwargs for backward comp

* FoF Quijote return only hids

* Add sorting of quijote

* Add path to CSiBORG ICs snapshot

* Add support for Quijote

* initmatch paths for quijote

* Add kwargs

* Fix blank lines

* Rename kwarg

* Remove unused import

* Remove hardcoded numbers

* Update for Quijote

* Do not store velocities in QUijote ICs

* Box units mass Quijote

* Fix typo

* Ensure particles are not right at the edge

* Add structfit paths for QUuijote

* Basic CSiBORG units

* Add more quijote halo reading

* Add Quijote fitting

* Docs changes

* Docs changes
2023-07-27 18:41:00 +02:00
Richard Stiskalek
de7def61d5
New RSP density distinction (#72)
* Edit docs

* Fix kernel units

* Add NGP interpolation

* Add Vobs but not implemented

* Add BORG density option

* Add BORG mcmc path

* Organise imports

* Add new density field distinction
2023-06-26 20:41:07 +01:00
Richard Stiskalek
27e1c181a2
Moving environment to RS (#70)
* Drag several fields at once

* add env in RSP

* Add docstrings

* Make __main__

* Fix bug

* Fix plotting little bug
2023-06-18 11:42:21 +01:00
Richard Stiskalek
35ccfb5c67
New matches (#69)
* Remove old file

* Add velocity plotting

* add smooth scale

* Fix bug

* Improve paths

* Edit plotting

* Add smoothed density

* Update boundaries

* Add basics

* Further docs

* Remove blank

* Better catalog broadcasting

* Update high res size

* Update plotting routines

* Update routine

* Update plotting

* Fix field saving name

* Add better colormap for environemnt
2023-06-17 19:52:26 +01:00
Richard Stiskalek
cbfd1cbc99
Fixing tidal field calculation (#68)
* Add import

* Fix tidal calculation

* Add env to paths

* Improve plot routines

* Add env classification
2023-06-16 18:31:43 +01:00
Richard Stiskalek
63b6cdbe72
Forward model fields to RSP (#66)
* Add radial velocity field

* Add overdensity plot

* Flip velocities too

* Add field calculations

* Add RSP mapping

* Add potential in RSP

* Add projected field plotting
2023-06-05 17:24:20 +02:00
Richard Stiskalek
cb5d35b1be
Density field calculation (#58)
* Add iterative density field generation

* Edit particle halfwidth selection

* Update import

* Remove old file

* Add position wrapping

* Add RSD support

* Add density field calculation

* Edit paths to the density field

* Flip argument order

* Edit documentation

* Edit docs

* update nb
2023-05-08 14:02:20 +01:00
Richard Stiskalek
4265315b47
Revert "Run density field estimator (#56)" (#57)
This reverts commit 98d0578fa7.
2023-05-08 13:59:55 +01:00
Richard Stiskalek
98d0578fa7
Run density field estimator (#56)
* Add iterative density field generation

* Edit particle halfwidth selection

* Update import

* Remove old file

* Add position wrapping

* Add RSD support

* Add density field calculation

* Edit paths to the density field

* Flip argument order
2023-05-08 13:58:12 +01:00
Richard Stiskalek
f48eb6dcb0
Dump radial profile information (#48)
* add radial position path

* pep8

* Add basic fit profile dumping

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* Update TODO

* Fix parts is None bug

* Update nb
2023-04-27 00:18:30 +01:00
Richard Stiskalek
fdb0df8d4c
Add mmain and other major updates (#44)
* Move paths to a separate file

* Add mmain reader

* Add a verbosity flag

* Fix imports

* Fix bug

* Rename files

* Return ultimate parents

* Add script to generate mmain

* Remove mmain path

* edit path

* Add mmain path

* Change function name

* Rename function

* Turn off verbose

* Fix list requirement

* Edit init match paths

* Fix init pathing

* Edit paths docs

* Edit dumpdir name

* Rename path

* Fix split paths

* Remove unused import

* Add comment

* Update readme

* remove read mmain

* Rename haloatalogue

* Fix minor bugs

* Update nbs

* Add create directory option

* Move split jobs

* Move spliot jobs

* Remove splitting

* Add import

* Edit script

* Deeper split folder

* Fix paths bug

* Rename catalogue

* Rename Catalogue

* Add new clumpread

* Edit paths

* add knn paths

* Update commenting

* Update imports

* Add more conversions

* Update temp file

* Add a note

* Add catalogue

* Cooment

* Update TODO

* Update script

* add nb

* Update

* pep8

* edit paths & pep8

* Fix knn auto paths

* add paths docs

* Add auto and cross knn paths

* Add new paths

* Simplify tpcf reading

* pep8 patch

* update readme

* Update progress

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* Pep 8 and restructure

* add lambda spin

* add clump and halo

* add checks

* Edit halo profile fit

* Update gitignore

* backup script
2023-04-18 11:02:36 +02:00