Commit graph

8 commits

Author SHA1 Message Date
Richard Stiskalek
1d847cbd06
Add Quijote (#61)
* Rename paths object

* Remove redshift calculation

* Explicit keywrod arg

* Rename box units

* Basic renaming

* Little docs

* Rename paths

* add imports

* Sort imports

* Add Quijote cat

* Split boxes

* add Quijote path

* Add origin argument

* Update nbs
2023-05-13 17:37:34 +01:00
rstiskalek
26ef1661a4 Add verbosity flag 2023-05-09 17:43:18 +01:00
Richard Stiskalek
b710b8e89c
Add new ICs (#59)
* edit IC paths

* Remove import

* Edit path

* Change naming

* Add __main__

* Script to match everything

* Edit docs

* Remove test statement

* Move import

* Update nb
2023-05-09 16:18:01 +01:00
Richard Stiskalek
51b670d30b
Updates to the overlap reader. (#54)
* Flag for loading clumps_cat

* Optionally load clumps catalogues

* Update single pair reading

* Edit reading many pairs
2023-05-07 16:34:55 +01:00
Richard Stiskalek
56e39a8b1d
Overlapper improvements (#53)
* Store indices as f32

* Fix init sorting

* Organise imports

* Rename pathing

* Add particle loading

* Improve particle reading

* Add h5py reader

* edit particle path

* Update particles loading

* update particles loading

* Fix particle dumping

* Add init fitting

* Fix bug due to insufficient precision

* Add commnet

* Add comment

* Add clumps catalogue to halo cat

* Add comment

* Make sure PIDS never forced to float32

* fix pid reading

* fix pid reading

* Update matching to work with new arrays

* Stop using cubical sub boxes, turn off nshift if no smoothing

* Improve caching

* Move function definitions

* Simplify calculation

* Add import

* Small updates to the halo

* Simplify calculation

* Simplify looping calculation

* fix tonew

* Add initial data

* Add skip condition

* Add unit conversion

* Add loading background in batches

* Rename mmain index

* Switch overlaps to h5

* Add finite lagpatch check

* fix column name

* Add verbosity flags

* Save halo IDs instead.

* Switch back to npz

* Delte nbs

* Reduce size of the box

* Load correct bckg of halos being matched

* Remove verbosity

* verbosity edits

* Change lower thresholds
2023-05-06 16:52:48 +01:00
Richard Stiskalek
f48eb6dcb0
Dump radial profile information (#48)
* add radial position path

* pep8

* Add basic fit profile dumping

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* Update TODO

* Fix parts is None bug

* Update nb
2023-04-27 00:18:30 +01:00
Richard Stiskalek
04119a5314
Update initial matching & overlaps (#47)
* pep8

* fix convention

* Update script

* enforce optimisation boundaries to be finite

* Update TODO

* Remove sky matching

* FIx a small bug

* fix bug

* Remove import

* Add halo fitted quantities

* Update nbs

* update README

* Add load_initial comments

* Rename nbs

* Delete nb

* Update imports

* Rename function

* Update matcher

* Add overlap paths

* Update the matching script

* Update verbosity

* Add verbosity flags

* Simplify make_bckg_delta

* bug fix

* fix bug
2023-04-21 01:35:06 +02:00
Richard Stiskalek
fdb0df8d4c
Add mmain and other major updates (#44)
* Move paths to a separate file

* Add mmain reader

* Add a verbosity flag

* Fix imports

* Fix bug

* Rename files

* Return ultimate parents

* Add script to generate mmain

* Remove mmain path

* edit path

* Add mmain path

* Change function name

* Rename function

* Turn off verbose

* Fix list requirement

* Edit init match paths

* Fix init pathing

* Edit paths docs

* Edit dumpdir name

* Rename path

* Fix split paths

* Remove unused import

* Add comment

* Update readme

* remove read mmain

* Rename haloatalogue

* Fix minor bugs

* Update nbs

* Add create directory option

* Move split jobs

* Move spliot jobs

* Remove splitting

* Add import

* Edit script

* Deeper split folder

* Fix paths bug

* Rename catalogue

* Rename Catalogue

* Add new clumpread

* Edit paths

* add knn paths

* Update commenting

* Update imports

* Add more conversions

* Update temp file

* Add a note

* Add catalogue

* Cooment

* Update TODO

* Update script

* add nb

* Update

* pep8

* edit paths & pep8

* Fix knn auto paths

* add paths docs

* Add auto and cross knn paths

* Add new paths

* Simplify tpcf reading

* pep8 patch

* update readme

* Update progress

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* pep8

* Pep 8 and restructure

* add lambda spin

* add clump and halo

* add checks

* Edit halo profile fit

* Update gitignore

* backup script
2023-04-18 11:02:36 +02:00
Renamed from scripts/singlematch.py (Browse further)