Commit graph

5 commits

Author SHA1 Message Date
Richard Stiskalek
5784011de0
kNN-CDF secondary halo bias (#40)
* Add seperate autoknn script & config file

* edit ics

* Edit submission script

* Add threshold values

* Edit batch sizign

* Remove print

* edit

* Rename files

* Rename

* Update nb

* edit runs

* Edit submit

* Add median threshold

* add new auto reader

* editt submit

* edit submit

* Edit submit

* Add mean prk

* Edit runs

* Remove correlation file

* Move split to clutering

* Add init

* Remove import

* Add the file

* Add correlation reading

* Edit scripts

* Add below and above median permutation for cross

* Update imports

* Move rvs_in_sphere

* Create utils

* Split

* Add import

* Add normalised marks

* Add import

* Edit readme

* Clean up submission file

* Stop tracking submit files

* Update gitignore

* Add poisson field analytical expression

* Add abstract generators

* Add generators

* Pass in the generator

* Add a check for if there are any files

* Start saving average density

* Update nb

* Update readme

* Update units

* Edit jobs

* Update submits

* Update reader

* Add random crossing

* Update crossing script

* Add crossing with random

* Update readme

* Update notebook
2023-04-09 20:57:05 +01:00
Richard Stiskalek
8d34b832af
Improve paths and documentation (#38)
* pep8

* style issue

* Documentation edits

* Remove old files

* Remove more old files

* Doc & stop setting snap and nsim in paths

* add nsnap, nsim support

* Remove blank space

* docs

* Docs edits

* Reduce redudant code

* docs

* Documentation

* Docs

* Simplify

* add nsnap nsim arguments

* Remove redundant docs

* Fix typos

* Shorten catalogue

* Remove import

* Remove blank line

* Docs only edits

* Rearrange imports

* Remove blank space

* Rearrange imports

* Rearrange imports

* Remove blank space

* Update submission scritp

* Edit docs

* Remove blank line

* new paths

* Update submission scripts

* Update file handling

* Remove blank line

* Move things around

* Ne paths

* Edit submission script

* edit paths

* Fix typo

* Fix bug

* Remove import

* Update nb
2023-04-04 15:22:00 +01:00
Richard Stiskalek
522ee709c9
Joint kNN-CDF calculation (#36)
* Add joint kNN CDF

* add jointKNN calculation

* change sub script

* Update readme

* update sub

* Small changes

* comments

* update nb

* Update submisison script
2023-04-01 11:16:11 +01:00
rstiskalek
8d933e7ba9 Add batch size to submission 2023-04-01 07:15:44 +01:00
Richard Stiskalek
63ab3548b4
kNN-CDF implementation (#34)
* Rewrite doc

* add kNN

* edit loading of samples with no init

* Add verbosity flag

* add KNN submission script

* do not make peaked cdf by default

* Add submit script

* stop ignore sh

* Add mass thresholding

* Edit gitignore

* edits

* Space points in logspace

* Calculate for all ICs

* Update TODO

* Add dtype support

* Update readme

* Update nb
2023-03-31 18:13:41 +01:00