scola
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parent
d7890ef2b4
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4 changed files with 146 additions and 6 deletions
123
scola.py
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123
scola.py
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def main_scola(parsed_args):
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from args_main import parse_arguments_main
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from low_level import print_starting_module, print_message, print_ending_module
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from os.path import isfile
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import subprocess
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print_starting_module("scola", verbose=parsed_args.verbose)
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main_dict = parse_arguments_main(parsed_args)
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param_file=parsed_args.paramfile
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if param_file is None:
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param_file = main_dict["paramdir"]+"parameters_"+main_dict["simname"]+".sbmy"
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log_file = main_dict["logdir"]+main_dict["mode"]+".log"
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nboxes_tot = int(parsed_args.N_tiles**3)
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if parsed_args.execution == "local":
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print_message("Running sCOLA in local mode.", 1, "scola", verbose=parsed_args.verbose)
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for b in range(1,nboxes_tot+1):
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print_message(f"Running box {b}/{nboxes_tot}.", 2, "scola", verbose=parsed_args.verbose)
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command_args = ["scola", param_file, log_file, "-b", str(b)]
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if parsed_args.verbose < 2:
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from io import BytesIO
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from low_level import stdout_redirector, stderr_redirector
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f = BytesIO()
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g = BytesIO()
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with stdout_redirector(f):
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with stderr_redirector(g):
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subprocess.run(command_args)
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g.close()
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f.close()
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else:
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subprocess.run(command_args)
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print_message(f"Box {b}/{nboxes_tot} finished.", 3, "scola", verbose=parsed_args.verbose)
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print_message("sCOLA finished.", 1, "scola", verbose=parsed_args.verbose)
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elif parsed_args.execution == "slurm":
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from slurm_submission import create_slurm_script, parse_arguments_slurm
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from args_main import parse_arguments_main
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print_message("Running monofonic in slurm mode.", 1, "scola", verbose=parsed_args.verbose)
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slurm_dict=parse_arguments_slurm(parsed_args)
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main_dict=parse_arguments_main(parsed_args)
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slurm_script = slurm_dict["scripts"]+"scola.sh"
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if not isfile(slurm_script):
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print_message(f"SLURM script {slurm_script} does not exist. Creating it.", 2, "scola", verbose=parsed_args.verbose)
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create_slurm_script(
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slurm_template=slurm_dict["scola_template"],
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slurm_script=slurm_script,
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job="scola",
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job_config_file=param_file,
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job_log=log_file,
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array=(1, nboxes_tot+1),
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)
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print_message(f"SLURM script written to {slurm_script}.", 3, "scola", verbose=parsed_args.verbose)
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else:
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print_message(f"SLURM script {slurm_script} exists.", 2, "scola", verbose=parsed_args.verbose)
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print_message(f"Submitting monofonic job to SLURM.", 1, "scola", verbose=parsed_args.verbose)
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command_args = ["sbatch", slurm_script]
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if parsed_args.verbose < 2:
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from io import BytesIO
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from low_level import stdout_redirector, stderr_redirector
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f = BytesIO()
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g = BytesIO()
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with stdout_redirector(f):
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with stderr_redirector(g):
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subprocess.run(command_args)
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g.close()
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f.close()
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else:
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subprocess.run(command_args)
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print_message("Monofonic job submitted.", 2, "scola", verbose=parsed_args.verbose)
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else:
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raise ValueError(f"Execution mode {parsed_args.execution} not recognized.")
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print_ending_module("scola", verbose=parsed_args.verbose)
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def main_pre_post_scola(parsed_args):
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from simbelmyne import main_simbelmyne
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main_simbelmyne(parsed_args)
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if __name__ == "__main__":
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from argparse import ArgumentParser
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from args_main import register_arguments_main
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from timestepping import register_arguments_timestepping, main_timestepping
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from parameters_card import register_arguments_card, main_parameter_card
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from cosmo_params import register_arguments_cosmo
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from parameters_monofonic import register_arguments_monofonic
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from slurm_submission import register_arguments_slurm
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from low_level import print_starting_module, print_message, print_ending_module, wait_until_file_exists
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parser = ArgumentParser(description="Run sCOLA.")
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# TODO: reduce the volume of arguments
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register_arguments_main(parser)
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register_arguments_timestepping(parser)
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register_arguments_monofonic(parser)
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register_arguments_slurm(parser)
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register_arguments_card(parser)
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register_arguments_cosmo(parser)
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parsed_args = parser.parse_args()
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card_dict = main_parameter_card(parsed_args)
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nboxes_tot = int(parsed_args.N_tiles**3)
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main_timestepping(parsed_args)
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main_pre_post_scola(parsed_args)
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if parsed_args.execution == "slurm":
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wait_until_file_exists(card_dict["OutputLPTPotential2"])
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main_scola(parsed_args)
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if parsed_args.execution == "slurm":
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for b in range(1,nboxes_tot+1):
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wait_until_file_exists(f"{card_dict['OutputTilesBase']}{b}.h5")
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main_pre_post_scola(parsed_args)
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