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<!DOCTYPE html>
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<title>Index — SelfiSys /Users/hoellinger/Library/CloudStorage/Dropbox/travail/these/science/code/SELFI/selfisys/src/ documentation</title>
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SelfiSys
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<p class="caption" role="heading"><span class="caption-text">API Documentation</span></p>
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<ul>
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<li class="toctree-l1"><a class="reference internal" href="selfisys.hiddenbox.html">hiddenbox</a><ul>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox"><code class="docutils literal notranslate"><span class="pre">HiddenBox</span></code></a><ul>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.Npop"><code class="docutils literal notranslate"><span class="pre">HiddenBox.Npop</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.Ntimesteps"><code class="docutils literal notranslate"><span class="pre">HiddenBox.Ntimesteps</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.Psingle"><code class="docutils literal notranslate"><span class="pre">HiddenBox.Psingle</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.compute_pool"><code class="docutils literal notranslate"><span class="pre">HiddenBox.compute_pool()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.evaluate"><code class="docutils literal notranslate"><span class="pre">HiddenBox.evaluate()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.force_neglect_lightcone"><code class="docutils literal notranslate"><span class="pre">HiddenBox.force_neglect_lightcone</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.force_recompute_mocks"><code class="docutils literal notranslate"><span class="pre">HiddenBox.force_recompute_mocks</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.gravity_on"><code class="docutils literal notranslate"><span class="pre">HiddenBox.gravity_on</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.load_pool"><code class="docutils literal notranslate"><span class="pre">HiddenBox.load_pool()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.make_data"><code class="docutils literal notranslate"><span class="pre">HiddenBox.make_data()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.modified_selfi"><code class="docutils literal notranslate"><span class="pre">HiddenBox.modified_selfi</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.prefix_mocks"><code class="docutils literal notranslate"><span class="pre">HiddenBox.prefix_mocks</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.reset_survey"><code class="docutils literal notranslate"><span class="pre">HiddenBox.reset_survey()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.setup_only"><code class="docutils literal notranslate"><span class="pre">HiddenBox.setup_only</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.switch_recompute_pool"><code class="docutils literal notranslate"><span class="pre">HiddenBox.switch_recompute_pool()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.switch_setup"><code class="docutils literal notranslate"><span class="pre">HiddenBox.switch_setup()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.update"><code class="docutils literal notranslate"><span class="pre">HiddenBox.update()</span></code></a></li>
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</ul>
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</li>
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</ul>
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</li>
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<li class="toctree-l1"><a class="reference internal" href="selfisys.normalise_hb.html">normalise_hb</a><ul>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.normalise_hb.html#selfisys.normalise_hb.define_normalisation"><code class="docutils literal notranslate"><span class="pre">define_normalisation()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.normalise_hb.html#selfisys.normalise_hb.worker_normalisation"><code class="docutils literal notranslate"><span class="pre">worker_normalisation()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.normalise_hb.html#selfisys.normalise_hb.worker_normalisation_public"><code class="docutils literal notranslate"><span class="pre">worker_normalisation_public()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.normalise_hb.html#selfisys.normalise_hb.worker_normalisation_wrapper"><code class="docutils literal notranslate"><span class="pre">worker_normalisation_wrapper()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l1"><a class="reference internal" href="selfisys.prior.html">prior</a><ul>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.get_summary"><code class="docutils literal notranslate"><span class="pre">get_summary()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.logposterior_hyperparameters_parallel"><code class="docutils literal notranslate"><span class="pre">logposterior_hyperparameters_parallel()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.perform_prior_optimisation_and_plot"><code class="docutils literal notranslate"><span class="pre">perform_prior_optimisation_and_plot()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior"><code class="docutils literal notranslate"><span class="pre">planck_prior</span></code></a><ul>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior.mean"><code class="docutils literal notranslate"><span class="pre">planck_prior.mean</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior.covariance"><code class="docutils literal notranslate"><span class="pre">planck_prior.covariance</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior.inv_covariance"><code class="docutils literal notranslate"><span class="pre">planck_prior.inv_covariance</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior.Nbin_max"><code class="docutils literal notranslate"><span class="pre">planck_prior.Nbin_max</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior.Nbin_min"><code class="docutils literal notranslate"><span class="pre">planck_prior.Nbin_min</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior.compute"><code class="docutils literal notranslate"><span class="pre">planck_prior.compute()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior.load"><code class="docutils literal notranslate"><span class="pre">planck_prior.load()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior.logpdf"><code class="docutils literal notranslate"><span class="pre">planck_prior.logpdf()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior.sample"><code class="docutils literal notranslate"><span class="pre">planck_prior.sample()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.planck_prior.save"><code class="docutils literal notranslate"><span class="pre">planck_prior.save()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.prior.html#selfisys.prior.worker_class"><code class="docutils literal notranslate"><span class="pre">worker_class()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l1"><a class="reference internal" href="selfisys.selection_functions.html">selection_functions</a><ul>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection"><code class="docutils literal notranslate"><span class="pre">LognormalSelection</span></code></a><ul>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.init_selection"><code class="docutils literal notranslate"><span class="pre">LognormalSelection.init_selection()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.lognormals_z_to_x"><code class="docutils literal notranslate"><span class="pre">LognormalSelection.lognormals_z_to_x()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.multiple_lognormal"><code class="docutils literal notranslate"><span class="pre">LognormalSelection.multiple_lognormal()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.multiple_lognormal_z"><code class="docutils literal notranslate"><span class="pre">LognormalSelection.multiple_lognormal_z()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.one_lognormal"><code class="docutils literal notranslate"><span class="pre">LognormalSelection.one_lognormal()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.one_lognormal_z"><code class="docutils literal notranslate"><span class="pre">LognormalSelection.one_lognormal_z()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.r_grid"><code class="docutils literal notranslate"><span class="pre">LognormalSelection.r_grid()</span></code></a></li>
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</ul>
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</li>
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</ul>
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</li>
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<li class="toctree-l1"><a class="reference internal" href="selfisys.selfi_interface.html">selfi_interface</a><ul>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.selfi_interface.html#selfisys.selfi_interface.PrintMessage"><code class="docutils literal notranslate"><span class="pre">PrintMessage()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.selfi_interface.html#selfisys.selfi_interface.indent"><code class="docutils literal notranslate"><span class="pre">indent()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.selfi_interface.html#selfisys.selfi_interface.unindent"><code class="docutils literal notranslate"><span class="pre">unindent()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l1"><a class="reference internal" href="selfisys.sbmy_interface.html">sbmy_interface</a><ul>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.sbmy_interface.html#selfisys.sbmy_interface.compute_Phi"><code class="docutils literal notranslate"><span class="pre">compute_Phi()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.sbmy_interface.html#selfisys.sbmy_interface.generate_white_noise_Field"><code class="docutils literal notranslate"><span class="pre">generate_white_noise_Field()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.sbmy_interface.html#selfisys.sbmy_interface.get_power_spectrum_from_cosmo"><code class="docutils literal notranslate"><span class="pre">get_power_spectrum_from_cosmo()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.sbmy_interface.html#selfisys.sbmy_interface.handle_time_stepping"><code class="docutils literal notranslate"><span class="pre">handle_time_stepping()</span></code></a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.sbmy_interface.html#selfisys.sbmy_interface.setup_sbmy_parfiles"><code class="docutils literal notranslate"><span class="pre">setup_sbmy_parfiles()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l1"><a class="reference internal" href="selfisys.grf.html">grf</a><ul>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.grf.html#selfisys.grf.primordial_grf"><code class="docutils literal notranslate"><span class="pre">primordial_grf()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l1"><a class="reference internal" href="selfisys.utils.html">selfisys.utils package</a><ul>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#submodules">Submodules</a></li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.examples_utils">selfisys.utils.examples_utils module</a><ul>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.examples_utils.clear_large_plot"><code class="docutils literal notranslate"><span class="pre">clear_large_plot()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.logger">selfisys.utils.logger module</a><ul>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.CustomLogger"><code class="docutils literal notranslate"><span class="pre">CustomLogger</span></code></a><ul>
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<li class="toctree-l4"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.CustomLogger.diagnostic"><code class="docutils literal notranslate"><span class="pre">CustomLogger.diagnostic()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.CustomLoggerHandler"><code class="docutils literal notranslate"><span class="pre">CustomLoggerHandler</span></code></a><ul>
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<li class="toctree-l4"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.CustomLoggerHandler.emit"><code class="docutils literal notranslate"><span class="pre">CustomLoggerHandler.emit()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.INDENT"><code class="docutils literal notranslate"><span class="pre">INDENT()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.PrintDiagnostic"><code class="docutils literal notranslate"><span class="pre">PrintDiagnostic()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.PrintError"><code class="docutils literal notranslate"><span class="pre">PrintError()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.PrintInfo"><code class="docutils literal notranslate"><span class="pre">PrintInfo()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.PrintLeftType"><code class="docutils literal notranslate"><span class="pre">PrintLeftType()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.PrintWarning"><code class="docutils literal notranslate"><span class="pre">PrintWarning()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.UNINDENT"><code class="docutils literal notranslate"><span class="pre">UNINDENT()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.logger.getCustomLogger"><code class="docutils literal notranslate"><span class="pre">getCustomLogger()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.low_level">selfisys.utils.low_level module</a><ul>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.low_level.stderr_redirector"><code class="docutils literal notranslate"><span class="pre">stderr_redirector()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.low_level.stdout_redirector"><code class="docutils literal notranslate"><span class="pre">stdout_redirector()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.parser">selfisys.utils.parser module</a><ul>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.parser.bool_sh"><code class="docutils literal notranslate"><span class="pre">bool_sh()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.parser.check_files_exist"><code class="docutils literal notranslate"><span class="pre">check_files_exist()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.parser.intNone"><code class="docutils literal notranslate"><span class="pre">intNone()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.parser.joinstrs"><code class="docutils literal notranslate"><span class="pre">joinstrs()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.parser.joinstrs_only"><code class="docutils literal notranslate"><span class="pre">joinstrs_only()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.parser.none_or_bool_or_str"><code class="docutils literal notranslate"><span class="pre">none_or_bool_or_str()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.parser.safe_npload"><code class="docutils literal notranslate"><span class="pre">safe_npload()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.path_utils">selfisys.utils.path_utils module</a><ul>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.path_utils.file_names_evaluate"><code class="docutils literal notranslate"><span class="pre">file_names_evaluate()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.path_utils.get_file_names"><code class="docutils literal notranslate"><span class="pre">get_file_names()</span></code></a></li>
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</ul>
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</li>
|
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.plot_examples">selfisys.utils.plot_examples module</a><ul>
|
|
<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_examples.plot_comoving_distance_redshift"><code class="docutils literal notranslate"><span class="pre">plot_comoving_distance_redshift()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_examples.plot_galaxy_field_slice"><code class="docutils literal notranslate"><span class="pre">plot_galaxy_field_slice()</span></code></a></li>
|
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_examples.plot_power_spectrum"><code class="docutils literal notranslate"><span class="pre">plot_power_spectrum()</span></code></a></li>
|
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_examples.plot_selection_functions_def_in_z"><code class="docutils literal notranslate"><span class="pre">plot_selection_functions_def_in_z()</span></code></a></li>
|
|
<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_examples.redshift_distance_conversion"><code class="docutils literal notranslate"><span class="pre">redshift_distance_conversion()</span></code></a></li>
|
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_examples.relative_error_analysis"><code class="docutils literal notranslate"><span class="pre">relative_error_analysis()</span></code></a></li>
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</ul>
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</li>
|
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.plot_params">selfisys.utils.plot_params module</a><ul>
|
|
<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_params.ScalarFormatterForceFormat_11"><code class="docutils literal notranslate"><span class="pre">ScalarFormatterForceFormat_11</span></code></a><ul>
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<li class="toctree-l4"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_params.ScalarFormatterForceFormat_11.get_offset"><code class="docutils literal notranslate"><span class="pre">ScalarFormatterForceFormat_11.get_offset()</span></code></a></li>
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|
<li class="toctree-l4"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_params.ScalarFormatterForceFormat_11.set_scientific"><code class="docutils literal notranslate"><span class="pre">ScalarFormatterForceFormat_11.set_scientific()</span></code></a></li>
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<li class="toctree-l4"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_params.ScalarFormatterForceFormat_11.set_useOffset"><code class="docutils literal notranslate"><span class="pre">ScalarFormatterForceFormat_11.set_useOffset()</span></code></a></li>
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</ul>
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</li>
|
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_params.create_all_colormaps"><code class="docutils literal notranslate"><span class="pre">create_all_colormaps()</span></code></a></li>
|
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_params.create_colormap"><code class="docutils literal notranslate"><span class="pre">create_colormap()</span></code></a></li>
|
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_params.dynamic_text_scaling"><code class="docutils literal notranslate"><span class="pre">dynamic_text_scaling()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_params.get_contours"><code class="docutils literal notranslate"><span class="pre">get_contours()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_params.reset_plotting"><code class="docutils literal notranslate"><span class="pre">reset_plotting()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_params.setup_plotting"><code class="docutils literal notranslate"><span class="pre">setup_plotting()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.plot_utils">selfisys.utils.plot_utils module</a><ul>
|
|
<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plot_C"><code class="docutils literal notranslate"><span class="pre">plot_C()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plot_fisher"><code class="docutils literal notranslate"><span class="pre">plot_fisher()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plot_gradients"><code class="docutils literal notranslate"><span class="pre">plot_gradients()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plot_histogram"><code class="docutils literal notranslate"><span class="pre">plot_histogram()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plot_mocks"><code class="docutils literal notranslate"><span class="pre">plot_mocks()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plot_mocks_compact"><code class="docutils literal notranslate"><span class="pre">plot_mocks_compact()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plot_observations"><code class="docutils literal notranslate"><span class="pre">plot_observations()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plot_prior_and_posterior_covariances"><code class="docutils literal notranslate"><span class="pre">plot_prior_and_posterior_covariances()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plot_reconstruction"><code class="docutils literal notranslate"><span class="pre">plot_reconstruction()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plot_selection_functions"><code class="docutils literal notranslate"><span class="pre">plot_selection_functions()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.plot_utils.plotly_3d"><code class="docutils literal notranslate"><span class="pre">plotly_3d()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.timestepping">selfisys.utils.timestepping module</a><ul>
|
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.timestepping.merge_nTS"><code class="docutils literal notranslate"><span class="pre">merge_nTS()</span></code></a></li>
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</ul>
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</li>
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.tools">selfisys.utils.tools module</a><ul>
|
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.tools.cosmo_vector_to_Simbelmyne_dict"><code class="docutils literal notranslate"><span class="pre">cosmo_vector_to_Simbelmyne_dict()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.tools.cosmo_vector_to_class_dict"><code class="docutils literal notranslate"><span class="pre">cosmo_vector_to_class_dict()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.tools.custom_stat"><code class="docutils literal notranslate"><span class="pre">custom_stat()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.tools.fisher_rao"><code class="docutils literal notranslate"><span class="pre">fisher_rao()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.tools.get_k_max"><code class="docutils literal notranslate"><span class="pre">get_k_max()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.tools.get_summary"><code class="docutils literal notranslate"><span class="pre">get_summary()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.tools.none_or_bool_or_str"><code class="docutils literal notranslate"><span class="pre">none_or_bool_or_str()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.tools.params_ids_to_Simbelmyne_dict"><code class="docutils literal notranslate"><span class="pre">params_ids_to_Simbelmyne_dict()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.tools.sample_omega_from_prior"><code class="docutils literal notranslate"><span class="pre">sample_omega_from_prior()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.tools.summary_to_score"><code class="docutils literal notranslate"><span class="pre">summary_to_score()</span></code></a></li>
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</ul>
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</li>
|
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils.workers">selfisys.utils.workers module</a><ul>
|
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.workers.Simbelmyne_worker"><code class="docutils literal notranslate"><span class="pre">Simbelmyne_worker()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.workers.evaluate_gradient_of_Symbelmyne"><code class="docutils literal notranslate"><span class="pre">evaluate_gradient_of_Symbelmyne()</span></code></a></li>
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<li class="toctree-l3"><a class="reference internal" href="selfisys.utils.html#selfisys.utils.workers.worker_gradient_Symbelmyne"><code class="docutils literal notranslate"><span class="pre">worker_gradient_Symbelmyne()</span></code></a></li>
|
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</ul>
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</li>
|
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<li class="toctree-l2"><a class="reference internal" href="selfisys.utils.html#module-selfisys.utils">Module contents</a></li>
|
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</ul>
|
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</li>
|
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</ul>
|
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<p class="caption" role="heading"><span class="caption-text">Contribute</span></p>
|
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<ul>
|
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<li class="toctree-l1"><a class="reference internal" href="CONTRIBUTING.html">Contributing to SelfiSys</a><ul>
|
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<li class="toctree-l2"><a class="reference internal" href="CONTRIBUTING.html#reporting-issues">Reporting Issues</a></li>
|
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<li class="toctree-l2"><a class="reference internal" href="CONTRIBUTING.html#submitting-contributions">Submitting Contributions</a></li>
|
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<li class="toctree-l2"><a class="reference internal" href="CONTRIBUTING.html#style-guidelines">Style Guidelines</a><ul>
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<li class="toctree-l3"><a class="reference internal" href="CONTRIBUTING.html#python-code">Python code</a></li>
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<li class="toctree-l3"><a class="reference internal" href="CONTRIBUTING.html#jupyter-notebooks">Jupyter Notebooks</a></li>
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</ul>
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</li>
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<li class="toctree-l2"><a class="reference internal" href="CONTRIBUTING.html#questions">Questions?</a></li>
|
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</ul>
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</li>
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</ul>
|
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<p class="caption" role="heading"><span class="caption-text">References</span></p>
|
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<ul>
|
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<li class="toctree-l1"><a class="reference internal" href="REFERENCES.html">References</a></li>
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<a href="https://github.com/hoellin/selfisys_public/blob/main/docs/source/genindex" class="fa fa-github"> Edit on GitHub</a>
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<hr/>
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<div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
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<div itemprop="articleBody">
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<h1 id="index">Index</h1>
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<div class="genindex-jumpbox">
|
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<a href="#B"><strong>B</strong></a>
|
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| <a href="#C"><strong>C</strong></a>
|
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| <a href="#D"><strong>D</strong></a>
|
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| <a href="#E"><strong>E</strong></a>
|
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| <a href="#F"><strong>F</strong></a>
|
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| <a href="#G"><strong>G</strong></a>
|
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| <a href="#H"><strong>H</strong></a>
|
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| <a href="#I"><strong>I</strong></a>
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| <a href="#J"><strong>J</strong></a>
|
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| <a href="#K"><strong>K</strong></a>
|
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| <a href="#L"><strong>L</strong></a>
|
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| <a href="#M"><strong>M</strong></a>
|
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| <a href="#N"><strong>N</strong></a>
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| <a href="#O"><strong>O</strong></a>
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| <a href="#P"><strong>P</strong></a>
|
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| <a href="#R"><strong>R</strong></a>
|
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| <a href="#S"><strong>S</strong></a>
|
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| <a href="#U"><strong>U</strong></a>
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| <a href="#W"><strong>W</strong></a>
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</div>
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<h2 id="B">B</h2>
|
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<table style="width: 100%" class="indextable genindextable"><tr>
|
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<td style="width: 33%; vertical-align: top;"><ul>
|
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<li><a href="selfisys.utils.html#selfisys.utils.parser.bool_sh">bool_sh() (in module selfisys.utils.parser)</a>
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</li>
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</ul></td>
|
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</tr></table>
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|
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<h2 id="C">C</h2>
|
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<table style="width: 100%" class="indextable genindextable"><tr>
|
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<td style="width: 33%; vertical-align: top;"><ul>
|
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<li><a href="selfisys.utils.html#selfisys.utils.parser.check_files_exist">check_files_exist() (in module selfisys.utils.parser)</a>
|
|
</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.examples_utils.clear_large_plot">clear_large_plot() (in module selfisys.utils.examples_utils)</a>
|
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</li>
|
|
<li><a href="selfisys.html#selfisys.prior.planck_prior.compute">compute() (selfisys.prior.planck_prior method)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior.compute">[1]</a>
|
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</li>
|
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<li><a href="selfisys.html#selfisys.setup_model.compute_alpha_cv">compute_alpha_cv() (in module selfisys.setup_model)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.compute_alpha_cv">[1]</a>
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</li>
|
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<li><a href="selfisys.html#selfisys.sbmy_interface.compute_Phi">compute_Phi() (in module selfisys.sbmy_interface)</a>, <a href="selfisys.sbmy_interface.html#selfisys.sbmy_interface.compute_Phi">[1]</a>
|
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</li>
|
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<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.compute_pool">compute_pool() (selfisys.hiddenbox.HiddenBox method)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.compute_pool">[1]</a>
|
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</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.tools.cosmo_vector_to_class_dict">cosmo_vector_to_class_dict() (in module selfisys.utils.tools)</a>
|
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</li>
|
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</ul></td>
|
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<td style="width: 33%; vertical-align: top;"><ul>
|
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<li><a href="selfisys.utils.html#selfisys.utils.tools.cosmo_vector_to_Simbelmyne_dict">cosmo_vector_to_Simbelmyne_dict() (in module selfisys.utils.tools)</a>
|
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</li>
|
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<li><a href="selfisys.html#selfisys.prior.planck_prior.covariance">covariance (selfisys.prior.planck_prior attribute)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior.covariance">[1]</a>
|
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</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.plot_params.create_all_colormaps">create_all_colormaps() (in module selfisys.utils.plot_params)</a>
|
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</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.plot_params.create_colormap">create_colormap() (in module selfisys.utils.plot_params)</a>
|
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</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.tools.custom_stat">custom_stat() (in module selfisys.utils.tools)</a>
|
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</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.logger.CustomLogger">CustomLogger (class in selfisys.utils.logger)</a>
|
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</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.logger.CustomLoggerHandler">CustomLoggerHandler (class in selfisys.utils.logger)</a>
|
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</li>
|
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</ul></td>
|
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</tr></table>
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|
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<h2 id="D">D</h2>
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<table style="width: 100%" class="indextable genindextable"><tr>
|
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.html#selfisys.normalise_hb.define_normalisation">define_normalisation() (in module selfisys.normalise_hb)</a>, <a href="selfisys.normalise_hb.html#selfisys.normalise_hb.define_normalisation">[1]</a>
|
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</li>
|
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</ul></td>
|
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<td style="width: 33%; vertical-align: top;"><ul>
|
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<li><a href="selfisys.utils.html#selfisys.utils.logger.CustomLogger.diagnostic">diagnostic() (selfisys.utils.logger.CustomLogger method)</a>
|
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</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.plot_params.dynamic_text_scaling">dynamic_text_scaling() (in module selfisys.utils.plot_params)</a>
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</li>
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</ul></td>
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</tr></table>
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<h2 id="E">E</h2>
|
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<table style="width: 100%" class="indextable genindextable"><tr>
|
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<td style="width: 33%; vertical-align: top;"><ul>
|
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<li><a href="selfisys.utils.html#selfisys.utils.logger.CustomLoggerHandler.emit">emit() (selfisys.utils.logger.CustomLoggerHandler method)</a>
|
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</li>
|
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</ul></td>
|
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<td style="width: 33%; vertical-align: top;"><ul>
|
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<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.evaluate">evaluate() (selfisys.hiddenbox.HiddenBox method)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.evaluate">[1]</a>
|
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</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.workers.evaluate_gradient_of_Symbelmyne">evaluate_gradient_of_Symbelmyne() (in module selfisys.utils.workers)</a>
|
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</li>
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</ul></td>
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</tr></table>
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|
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<h2 id="F">F</h2>
|
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<table style="width: 100%" class="indextable genindextable"><tr>
|
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<td style="width: 33%; vertical-align: top;"><ul>
|
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<li><a href="selfisys.utils.html#selfisys.utils.path_utils.file_names_evaluate">file_names_evaluate() (in module selfisys.utils.path_utils)</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.tools.fisher_rao">fisher_rao() (in module selfisys.utils.tools)</a>
|
|
</li>
|
|
</ul></td>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.force_neglect_lightcone">force_neglect_lightcone (selfisys.hiddenbox.HiddenBox property)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.force_neglect_lightcone">[1]</a>
|
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</li>
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<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.force_recompute_mocks">force_recompute_mocks (selfisys.hiddenbox.HiddenBox property)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.force_recompute_mocks">[1]</a>
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</li>
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</ul></td>
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</tr></table>
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<h2 id="G">G</h2>
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<table style="width: 100%" class="indextable genindextable"><tr>
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.G_sim_path">G_sim_path (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.G_sim_path">[1]</a>
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</li>
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<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.G_ss_path">G_ss_path (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.G_ss_path">[1]</a>
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</li>
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<li><a href="selfisys.html#selfisys.sbmy_interface.generate_white_noise_Field">generate_white_noise_Field() (in module selfisys.sbmy_interface)</a>, <a href="selfisys.sbmy_interface.html#selfisys.sbmy_interface.generate_white_noise_Field">[1]</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_params.get_contours">get_contours() (in module selfisys.utils.plot_params)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.path_utils.get_file_names">get_file_names() (in module selfisys.utils.path_utils)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.tools.get_k_max">get_k_max() (in module selfisys.utils.tools)</a>
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</li>
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</ul></td>
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_params.ScalarFormatterForceFormat_11.get_offset">get_offset() (selfisys.utils.plot_params.ScalarFormatterForceFormat_11 method)</a>
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</li>
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<li><a href="selfisys.html#selfisys.sbmy_interface.get_power_spectrum_from_cosmo">get_power_spectrum_from_cosmo() (in module selfisys.sbmy_interface)</a>, <a href="selfisys.sbmy_interface.html#selfisys.sbmy_interface.get_power_spectrum_from_cosmo">[1]</a>
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</li>
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<li><a href="selfisys.html#selfisys.prior.get_summary">get_summary() (in module selfisys.prior)</a>, <a href="selfisys.prior.html#selfisys.prior.get_summary">[1]</a>
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<ul>
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<li><a href="selfisys.utils.html#selfisys.utils.tools.get_summary">(in module selfisys.utils.tools)</a>
|
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</li>
|
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</ul></li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.logger.getCustomLogger">getCustomLogger() (in module selfisys.utils.logger)</a>
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</li>
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<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.gravity_on">gravity_on (selfisys.hiddenbox.HiddenBox property)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.gravity_on">[1]</a>
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</li>
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</ul></td>
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</tr></table>
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<h2 id="H">H</h2>
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<table style="width: 100%" class="indextable genindextable"><tr>
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.html#selfisys.sbmy_interface.handle_time_stepping">handle_time_stepping() (in module selfisys.sbmy_interface)</a>, <a href="selfisys.sbmy_interface.html#selfisys.sbmy_interface.handle_time_stepping">[1]</a>
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</li>
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</ul></td>
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox">HiddenBox (class in selfisys.hiddenbox)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox">[1]</a>
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</li>
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</ul></td>
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</tr></table>
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<h2 id="I">I</h2>
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<table style="width: 100%" class="indextable genindextable"><tr>
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.html#selfisys.selfi_interface.indent">indent() (in module selfisys.selfi_interface)</a>, <a href="selfisys.selfi_interface.html#selfisys.selfi_interface.indent">[1]</a>
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</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.logger.INDENT">INDENT() (in module selfisys.utils.logger)</a>
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</li>
|
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</ul></td>
|
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.html#selfisys.selection_functions.LognormalSelection.init_selection">init_selection() (selfisys.selection_functions.LognormalSelection method)</a>, <a href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.init_selection">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.parser.intNone">intNone() (in module selfisys.utils.parser)</a>
|
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</li>
|
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<li><a href="selfisys.html#selfisys.prior.planck_prior.inv_covariance">inv_covariance (selfisys.prior.planck_prior attribute)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior.inv_covariance">[1]</a>
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</li>
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</ul></td>
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</tr></table>
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<h2 id="J">J</h2>
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<table style="width: 100%" class="indextable genindextable"><tr>
|
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.utils.html#selfisys.utils.parser.joinstrs">joinstrs() (in module selfisys.utils.parser)</a>
|
|
</li>
|
|
</ul></td>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
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<li><a href="selfisys.utils.html#selfisys.utils.parser.joinstrs_only">joinstrs_only() (in module selfisys.utils.parser)</a>
|
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</li>
|
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</ul></td>
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</tr></table>
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|
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<h2 id="K">K</h2>
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|
<table style="width: 100%" class="indextable genindextable"><tr>
|
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.k_s">k_s (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.k_s">[1]</a>
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</li>
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</ul></td>
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</tr></table>
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<h2 id="L">L</h2>
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|
<table style="width: 100%" class="indextable genindextable"><tr>
|
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.L">L (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.L">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.prior.planck_prior.load">load() (selfisys.prior.planck_prior class method)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior.load">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.load_pool">load_pool() (selfisys.hiddenbox.HiddenBox method)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.load_pool">[1]</a>
|
|
</li>
|
|
</ul></td>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.html#selfisys.selection_functions.LognormalSelection.lognormals_z_to_x">lognormals_z_to_x() (selfisys.selection_functions.LognormalSelection method)</a>, <a href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.lognormals_z_to_x">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.selection_functions.LognormalSelection">LognormalSelection (class in selfisys.selection_functions)</a>, <a href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.prior.planck_prior.logpdf">logpdf() (selfisys.prior.planck_prior method)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior.logpdf">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.prior.logposterior_hyperparameters_parallel">logposterior_hyperparameters_parallel() (in module selfisys.prior)</a>, <a href="selfisys.prior.html#selfisys.prior.logposterior_hyperparameters_parallel">[1]</a>
|
|
</li>
|
|
</ul></td>
|
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</tr></table>
|
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|
|
<h2 id="M">M</h2>
|
|
<table style="width: 100%" class="indextable genindextable"><tr>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.make_data">make_data() (selfisys.hiddenbox.HiddenBox method)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.make_data">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.prior.planck_prior.mean">mean (selfisys.prior.planck_prior attribute)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior.mean">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.timestepping.merge_nTS">merge_nTS() (in module selfisys.utils.timestepping)</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.setup_model.ModelSetup">ModelSetup (class in selfisys.setup_model)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.modified_selfi">modified_selfi (selfisys.hiddenbox.HiddenBox property)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.modified_selfi">[1]</a>
|
|
</li>
|
|
<li>
|
|
module
|
|
|
|
<ul>
|
|
<li><a href="selfisys.html#module-selfisys">selfisys</a>
|
|
</li>
|
|
<li><a href="selfisys.global_parameters.html#module-selfisys.global_parameters">selfisys.global_parameters</a>, <a href="selfisys.html#module-selfisys.global_parameters">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.grf.html#module-selfisys.grf">selfisys.grf</a>, <a href="selfisys.html#module-selfisys.grf">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.hiddenbox.html#module-selfisys.hiddenbox">selfisys.hiddenbox</a>, <a href="selfisys.html#module-selfisys.hiddenbox">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#module-selfisys.normalise_hb">selfisys.normalise_hb</a>, <a href="selfisys.normalise_hb.html#module-selfisys.normalise_hb">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#module-selfisys.prior">selfisys.prior</a>, <a href="selfisys.prior.html#module-selfisys.prior">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#module-selfisys.sbmy_interface">selfisys.sbmy_interface</a>, <a href="selfisys.sbmy_interface.html#module-selfisys.sbmy_interface">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#module-selfisys.selection_functions">selfisys.selection_functions</a>, <a href="selfisys.selection_functions.html#module-selfisys.selection_functions">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#module-selfisys.selfi_interface">selfisys.selfi_interface</a>, <a href="selfisys.selfi_interface.html#module-selfisys.selfi_interface">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#module-selfisys.setup_model">selfisys.setup_model</a>, <a href="selfisys.setup_model.html#module-selfisys.setup_model">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils">selfisys.utils</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.examples_utils">selfisys.utils.examples_utils</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.logger">selfisys.utils.logger</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.low_level">selfisys.utils.low_level</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.parser">selfisys.utils.parser</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.path_utils">selfisys.utils.path_utils</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.plot_examples">selfisys.utils.plot_examples</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.plot_params">selfisys.utils.plot_params</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.plot_utils">selfisys.utils.plot_utils</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.timestepping">selfisys.utils.timestepping</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.tools">selfisys.utils.tools</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.workers">selfisys.utils.workers</a>
|
|
</li>
|
|
</ul></li>
|
|
</ul></td>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.html#selfisys.selection_functions.LognormalSelection.multiple_lognormal">multiple_lognormal() (selfisys.selection_functions.LognormalSelection method)</a>, <a href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.multiple_lognormal">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.selection_functions.LognormalSelection.multiple_lognormal_z">multiple_lognormal_z() (selfisys.selection_functions.LognormalSelection method)</a>, <a href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.multiple_lognormal_z">[1]</a>
|
|
</li>
|
|
</ul></td>
|
|
</tr></table>
|
|
|
|
<h2 id="N">N</h2>
|
|
<table style="width: 100%" class="indextable genindextable"><tr>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.html#selfisys.prior.planck_prior.Nbin_max">Nbin_max (selfisys.prior.planck_prior property)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior.Nbin_max">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.prior.planck_prior.Nbin_min">Nbin_min (selfisys.prior.planck_prior property)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior.Nbin_min">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.parser.none_or_bool_or_str">none_or_bool_or_str() (in module selfisys.utils.parser)</a>
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.tools.none_or_bool_or_str">(in module selfisys.utils.tools)</a>
|
|
</li>
|
|
</ul></li>
|
|
</ul></td>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.Npop">Npop (selfisys.hiddenbox.HiddenBox property)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.Npop">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.Ntimesteps">Ntimesteps (selfisys.hiddenbox.HiddenBox property)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.Ntimesteps">[1]</a>
|
|
</li>
|
|
</ul></td>
|
|
</tr></table>
|
|
|
|
<h2 id="O">O</h2>
|
|
<table style="width: 100%" class="indextable genindextable"><tr>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.html#selfisys.selection_functions.LognormalSelection.one_lognormal">one_lognormal() (selfisys.selection_functions.LognormalSelection static method)</a>, <a href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.one_lognormal">[1]</a>
|
|
</li>
|
|
</ul></td>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.html#selfisys.selection_functions.LognormalSelection.one_lognormal_z">one_lognormal_z() (selfisys.selection_functions.LognormalSelection static method)</a>, <a href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.one_lognormal_z">[1]</a>
|
|
</li>
|
|
</ul></td>
|
|
</tr></table>
|
|
|
|
<h2 id="P">P</h2>
|
|
<table style="width: 100%" class="indextable genindextable"><tr>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.P">P (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.P">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.P_0">P_0 (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.P_0">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.P_ss_obj_path">P_ss_obj_path (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.P_ss_obj_path">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.tools.params_ids_to_Simbelmyne_dict">params_ids_to_Simbelmyne_dict() (in module selfisys.utils.tools)</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.Pbins">Pbins (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.Pbins">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.Pbins_bnd">Pbins_bnd (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.Pbins_bnd">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.prior.perform_prior_optimisation_and_plot">perform_prior_optimisation_and_plot() (in module selfisys.prior)</a>, <a href="selfisys.prior.html#selfisys.prior.perform_prior_optimisation_and_plot">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.planck_Pk">planck_Pk (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.planck_Pk">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.prior.planck_prior">planck_prior (class in selfisys.prior)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plot_C">plot_C() (in module selfisys.utils.plot_utils)</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.plot_examples.plot_comoving_distance_redshift">plot_comoving_distance_redshift() (in module selfisys.utils.plot_examples)</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plot_fisher">plot_fisher() (in module selfisys.utils.plot_utils)</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.plot_examples.plot_galaxy_field_slice">plot_galaxy_field_slice() (in module selfisys.utils.plot_examples)</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plot_gradients">plot_gradients() (in module selfisys.utils.plot_utils)</a>
|
|
</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plot_histogram">plot_histogram() (in module selfisys.utils.plot_utils)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plot_mocks">plot_mocks() (in module selfisys.utils.plot_utils)</a>
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</li>
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</ul></td>
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plot_mocks_compact">plot_mocks_compact() (in module selfisys.utils.plot_utils)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plot_observations">plot_observations() (in module selfisys.utils.plot_utils)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_examples.plot_power_spectrum">plot_power_spectrum() (in module selfisys.utils.plot_examples)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plot_prior_and_posterior_covariances">plot_prior_and_posterior_covariances() (in module selfisys.utils.plot_utils)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plot_reconstruction">plot_reconstruction() (in module selfisys.utils.plot_utils)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plot_selection_functions">plot_selection_functions() (in module selfisys.utils.plot_utils)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_examples.plot_selection_functions_def_in_z">plot_selection_functions_def_in_z() (in module selfisys.utils.plot_examples)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_utils.plotly_3d">plotly_3d() (in module selfisys.utils.plot_utils)</a>
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</li>
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<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.prefix_mocks">prefix_mocks (selfisys.hiddenbox.HiddenBox property)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.prefix_mocks">[1]</a>
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</li>
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<li><a href="selfisys.grf.html#selfisys.grf.primordial_grf">primordial_grf() (in module selfisys.grf)</a>, <a href="selfisys.html#selfisys.grf.primordial_grf">[1]</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.logger.PrintDiagnostic">PrintDiagnostic() (in module selfisys.utils.logger)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.logger.PrintError">PrintError() (in module selfisys.utils.logger)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.logger.PrintInfo">PrintInfo() (in module selfisys.utils.logger)</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.logger.PrintLeftType">PrintLeftType() (in module selfisys.utils.logger)</a>
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</li>
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<li><a href="selfisys.html#selfisys.selfi_interface.PrintMessage">PrintMessage() (in module selfisys.selfi_interface)</a>, <a href="selfisys.selfi_interface.html#selfisys.selfi_interface.PrintMessage">[1]</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.logger.PrintWarning">PrintWarning() (in module selfisys.utils.logger)</a>
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</li>
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<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.Psingle">Psingle (selfisys.hiddenbox.HiddenBox property)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.Psingle">[1]</a>
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</li>
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</ul></td>
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</tr></table>
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<h2 id="R">R</h2>
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<table style="width: 100%" class="indextable genindextable"><tr>
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.html#selfisys.selection_functions.LognormalSelection.r_grid">r_grid() (selfisys.selection_functions.LognormalSelection method)</a>, <a href="selfisys.selection_functions.html#selfisys.selection_functions.LognormalSelection.r_grid">[1]</a>
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</li>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_examples.redshift_distance_conversion">redshift_distance_conversion() (in module selfisys.utils.plot_examples)</a>
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</li>
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</ul></td>
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.utils.html#selfisys.utils.plot_examples.relative_error_analysis">relative_error_analysis() (in module selfisys.utils.plot_examples)</a>
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</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.plot_params.reset_plotting">reset_plotting() (in module selfisys.utils.plot_params)</a>
|
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</li>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.reset_survey">reset_survey() (selfisys.hiddenbox.HiddenBox method)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.reset_survey">[1]</a>
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</li>
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</ul></td>
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</tr></table>
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<h2 id="S">S</h2>
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<table style="width: 100%" class="indextable genindextable"><tr>
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<td style="width: 33%; vertical-align: top;"><ul>
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<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.S">S (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.S">[1]</a>
|
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</li>
|
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<li><a href="selfisys.utils.html#selfisys.utils.parser.safe_npload">safe_npload() (in module selfisys.utils.parser)</a>
|
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</li>
|
|
<li><a href="selfisys.html#selfisys.prior.planck_prior.sample">sample() (selfisys.prior.planck_prior method)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior.sample">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.tools.sample_omega_from_prior">sample_omega_from_prior() (in module selfisys.utils.tools)</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.prior.planck_prior.save">save() (selfisys.prior.planck_prior method)</a>, <a href="selfisys.prior.html#selfisys.prior.planck_prior.save">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.plot_params.ScalarFormatterForceFormat_11">ScalarFormatterForceFormat_11 (class in selfisys.utils.plot_params)</a>
|
|
</li>
|
|
<li>
|
|
selfisys
|
|
|
|
<ul>
|
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<li><a href="selfisys.html#module-selfisys">module</a>
|
|
</li>
|
|
</ul></li>
|
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<li>
|
|
selfisys.global_parameters
|
|
|
|
<ul>
|
|
<li><a href="selfisys.global_parameters.html#module-selfisys.global_parameters">module</a>, <a href="selfisys.html#module-selfisys.global_parameters">[1]</a>
|
|
</li>
|
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</ul></li>
|
|
<li>
|
|
selfisys.grf
|
|
|
|
<ul>
|
|
<li><a href="selfisys.grf.html#module-selfisys.grf">module</a>, <a href="selfisys.html#module-selfisys.grf">[1]</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.hiddenbox
|
|
|
|
<ul>
|
|
<li><a href="selfisys.hiddenbox.html#module-selfisys.hiddenbox">module</a>, <a href="selfisys.html#module-selfisys.hiddenbox">[1]</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.normalise_hb
|
|
|
|
<ul>
|
|
<li><a href="selfisys.html#module-selfisys.normalise_hb">module</a>, <a href="selfisys.normalise_hb.html#module-selfisys.normalise_hb">[1]</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.prior
|
|
|
|
<ul>
|
|
<li><a href="selfisys.html#module-selfisys.prior">module</a>, <a href="selfisys.prior.html#module-selfisys.prior">[1]</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.sbmy_interface
|
|
|
|
<ul>
|
|
<li><a href="selfisys.html#module-selfisys.sbmy_interface">module</a>, <a href="selfisys.sbmy_interface.html#module-selfisys.sbmy_interface">[1]</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.selection_functions
|
|
|
|
<ul>
|
|
<li><a href="selfisys.html#module-selfisys.selection_functions">module</a>, <a href="selfisys.selection_functions.html#module-selfisys.selection_functions">[1]</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.selfi_interface
|
|
|
|
<ul>
|
|
<li><a href="selfisys.html#module-selfisys.selfi_interface">module</a>, <a href="selfisys.selfi_interface.html#module-selfisys.selfi_interface">[1]</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.setup_model
|
|
|
|
<ul>
|
|
<li><a href="selfisys.html#module-selfisys.setup_model">module</a>, <a href="selfisys.setup_model.html#module-selfisys.setup_model">[1]</a>
|
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</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.utils
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils">module</a>
|
|
</li>
|
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</ul></li>
|
|
<li>
|
|
selfisys.utils.examples_utils
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.examples_utils">module</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.utils.logger
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.logger">module</a>
|
|
</li>
|
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</ul></li>
|
|
</ul></td>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li>
|
|
selfisys.utils.low_level
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.low_level">module</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.utils.parser
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.parser">module</a>
|
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</li>
|
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</ul></li>
|
|
<li>
|
|
selfisys.utils.path_utils
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.path_utils">module</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.utils.plot_examples
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.plot_examples">module</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.utils.plot_params
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.plot_params">module</a>
|
|
</li>
|
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</ul></li>
|
|
<li>
|
|
selfisys.utils.plot_utils
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.plot_utils">module</a>
|
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</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.utils.timestepping
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.timestepping">module</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.utils.tools
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.tools">module</a>
|
|
</li>
|
|
</ul></li>
|
|
<li>
|
|
selfisys.utils.workers
|
|
|
|
<ul>
|
|
<li><a href="selfisys.utils.html#module-selfisys.utils.workers">module</a>
|
|
</li>
|
|
</ul></li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.plot_params.ScalarFormatterForceFormat_11.set_scientific">set_scientific() (selfisys.utils.plot_params.ScalarFormatterForceFormat_11 method)</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.plot_params.ScalarFormatterForceFormat_11.set_useOffset">set_useOffset() (selfisys.utils.plot_params.ScalarFormatterForceFormat_11 method)</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.setup_model.setup_model">setup_model() (in module selfisys.setup_model)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.setup_model">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.setup_only">setup_only (selfisys.hiddenbox.HiddenBox property)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.setup_only">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.plot_params.setup_plotting">setup_plotting() (in module selfisys.utils.plot_params)</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.sbmy_interface.setup_sbmy_parfiles">setup_sbmy_parfiles() (in module selfisys.sbmy_interface)</a>, <a href="selfisys.sbmy_interface.html#selfisys.sbmy_interface.setup_sbmy_parfiles">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.workers.Simbelmyne_worker">Simbelmyne_worker() (in module selfisys.utils.workers)</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.setup_model.ModelSetup.size">size (selfisys.setup_model.ModelSetup attribute)</a>, <a href="selfisys.setup_model.html#selfisys.setup_model.ModelSetup.size">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.low_level.stderr_redirector">stderr_redirector() (in module selfisys.utils.low_level)</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.low_level.stdout_redirector">stdout_redirector() (in module selfisys.utils.low_level)</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.tools.summary_to_score">summary_to_score() (in module selfisys.utils.tools)</a>
|
|
</li>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.switch_recompute_pool">switch_recompute_pool() (selfisys.hiddenbox.HiddenBox method)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.switch_recompute_pool">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.switch_setup">switch_setup() (selfisys.hiddenbox.HiddenBox method)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.switch_setup">[1]</a>
|
|
</li>
|
|
</ul></td>
|
|
</tr></table>
|
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|
|
<h2 id="U">U</h2>
|
|
<table style="width: 100%" class="indextable genindextable"><tr>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.html#selfisys.selfi_interface.unindent">unindent() (in module selfisys.selfi_interface)</a>, <a href="selfisys.selfi_interface.html#selfisys.selfi_interface.unindent">[1]</a>
|
|
</li>
|
|
</ul></td>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.logger.UNINDENT">UNINDENT() (in module selfisys.utils.logger)</a>
|
|
</li>
|
|
<li><a href="selfisys.hiddenbox.html#selfisys.hiddenbox.HiddenBox.update">update() (selfisys.hiddenbox.HiddenBox method)</a>, <a href="selfisys.html#selfisys.hiddenbox.HiddenBox.update">[1]</a>
|
|
</li>
|
|
</ul></td>
|
|
</tr></table>
|
|
|
|
<h2 id="W">W</h2>
|
|
<table style="width: 100%" class="indextable genindextable"><tr>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.html#selfisys.prior.worker_class">worker_class() (in module selfisys.prior)</a>, <a href="selfisys.prior.html#selfisys.prior.worker_class">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.utils.html#selfisys.utils.workers.worker_gradient_Symbelmyne">worker_gradient_Symbelmyne() (in module selfisys.utils.workers)</a>
|
|
</li>
|
|
</ul></td>
|
|
<td style="width: 33%; vertical-align: top;"><ul>
|
|
<li><a href="selfisys.html#selfisys.normalise_hb.worker_normalisation">worker_normalisation() (in module selfisys.normalise_hb)</a>, <a href="selfisys.normalise_hb.html#selfisys.normalise_hb.worker_normalisation">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.normalise_hb.worker_normalisation_public">worker_normalisation_public() (in module selfisys.normalise_hb)</a>, <a href="selfisys.normalise_hb.html#selfisys.normalise_hb.worker_normalisation_public">[1]</a>
|
|
</li>
|
|
<li><a href="selfisys.html#selfisys.normalise_hb.worker_normalisation_wrapper">worker_normalisation_wrapper() (in module selfisys.normalise_hb)</a>, <a href="selfisys.normalise_hb.html#selfisys.normalise_hb.worker_normalisation_wrapper">[1]</a>
|
|
</li>
|
|
</ul></td>
|
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</tr></table>
|
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