Initial commit: v0.1.0

submit/step3.sh

@@ -0,0 +1,51 @@
+#!/bin/bash
+# ----------------------------------------------------------------------
+# Copyright (C) 2024 Tristan Hoellinger
+# Distributed under the GNU General Public License v3.0 (GPLv3).
+# See the LICENSE file in the root directory for details.
+# SPDX-License-Identifier: GPL-3.0-or-later
+# ----------------------------------------------------------------------
+
+# Author: Tristan Hoellinger
+# Version: 0.1
+# Date: 2024
+# License: GPLv3
+
+eval "$(conda shell.bash hook)"
+conda activate simbel
+
+# Notes:
+# - One shall use "recompute_mocks True" when running step3 for the
+#   first time within a given run.
+# - Afterwards, one can, again, use "recompute_mocks True" for
+#   recomputing the mocks with a misspecified model.
+
+export OMP_NUM_THREADS=1
+python $SELFISYS_ROOT_PATH"src/selfisys/pipeline/step3.py" \
+    --wd $SELFISYS_OUTPUT_PATH"dev/643600502/run1/" \
+    --N_THREADS 8 \
+    --N_THREADS_PRIOR 8 \
+    --prior "planck2018" \
+    --nsamples_prior 1000 \
+    --survey_mask_path $SELFISYS_OUTPUT_PATH"expl_notebooks/surveymask/raw_mask_N64.npy" \
+    --params_obs None \
+    --name_obs obs \
+    --force_obs False \
+    --recompute_obs_mock False \
+    --reset_window_function True \
+    --selection_params 0.1150 0.1492 0.1818 0.1500 0.4925 0.8182 1 1 1 \
+    --Ne 150 \
+    --Ns 3 \
+    --prefix_mocks None \
+    --force_recompute_prior False \
+    --lin_bias 1.47 1.99 2.32 \
+    --recompute_mocks True \
+    --perform_score_compression True \
+    --force_score_compression False
+
+    # --lin_bias 1.47 1.99 2.32 \
+    # --recompute_mocks True \
+
+    # --noise_dbg 0.1 \
+
+exit 0