#+ # VIDE -- Void IDEntification pipeline -- ./pipeline/datasets/mergertree.py # Copyright (C) 2010-2013 Guilhem Lavaux # Copyright (C) 2011-2013 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; version 2 of the License. # # # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License along # with this program; if not, write to the Free Software Foundation, Inc., # 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. #+ import os # ----------------------------------------------------------------------------- # ----------------------------------------------------------------------------- # CONFIGURATION startCatalogStage = 0 endCatalogStage = 0 continueRun = False startAPStage = 1 endAPStage = 2 # directory for the input simulation/observational particle files catalogDir = os.getenv("HOME")+"/workspace/Voids/catalogs/mergertree1024/" # path to HOD code hodPath = os.getenv("HOME")+"/projects/Voids/hod/HOD.x" # where to put the final void catalog, figures, and output logs voidOutputDir = os.getenv("HOME")+"/workspace/Voids/mergertree1024/" figDir = os.getenv("PWD")+"/../figs/mergertree1024/" logDir = os.getenv("PWD")+"/../logs/mergertree1024/" # where to place the pipeline scripts scriptDir = os.getenv("PWD")+"/mergertree1024/" # simulation or observation? dataType = "simulation" # available formats for simulation: gadget, mergertree dataFormat = "sdf" dataUnit = 1 # as multiple of Mpc/h # place particles on the lightcone? useLightCone = False # also do peculiar velocities? doPecVel = False # common filename of particle files particleFileBase = "mf_4s_1G_1k_NNNNN" particleFileDummy = 'NNNNN' # list of file numbers for the particle files # to get particle file name, we take particleFileBase+fileNum fileNums = ["1.000"] # redshift of each file in the above list redshifts = ["0.0"] # how many independent slices along the z-axis? numSlices = 1 #numSlices = 4 numAPSlices = 1 # how many subdivisions along the x- and y- axis? # ( = 2 will make 4 subvolumes for each slice, = 3 will make 9, etc.) numSubvolumes = 1 # prefix to give all outputs prefix = "mt_" # list of desired subsamples - these are in unts of h Mpc^-3! subSamples = [0.1, 0.05, 0.02, 0.01, 0.004, 0.002, 0.001, 0.0003, 0.0001] #doSubSampling = False # do the subsampling in preparation script? doSubSampling = True # do the subsampling in preparation script? # common filename of halo files, leave blank to ignore halos haloFileBase = "mf_4s_1G_1k_bgc2_NNNNN.sdf" haloFileDummy = 'NNNNN' # minimum halo mass cuts to apply for the halo catalog # use "none" to get all halos minHaloMasses = ["none", 1.2e13] #minHaloMasses = [7.0e11, 1.2e13] # locations of data in the halo catalog haloFileMCol = 6 haloFileXCol = 0 haloFileYCol = 1 haloFileZCol = 2 haloFileVXCol = 3 haloFileVYCol = 4 haloFileVZCol = 5 haloFileColSep = ',' haloFileNumComLines = 0 # adjust these two parameters given the memory contraints on your system: # numZobovDivisions: how many sub-volumes per dimension will zobov process # numZobovThreads: how many sub-volumes to process at once? numZobovDivisions = 4 numZobovThreads = 4 # simulation information numPart = 1024*1024*1024 lbox = 999.983 # Mpc/h omegaM = 0.2847979853038958 hubble = 0.6962 #galDens = 0.000225 hodParmList = [ {'name' : "LowRes", #BOSS: Manera et al. 2012, eq. 26 'Mmin' : 0.0, 'M1' : 1.e14, 'sigma_logM' : 0.596, 'alpha' : 1.0127, 'Mcut' : 1.19399e13, 'galDens' : 0.0002, }, {'name' : "HighRes", 'Mmin' : 0.0, #'Mmin' : 1.99525e12, 'M1' : 3.80189e13, 'sigma_logM' : 0.21, 'alpha' : 1.12, 'Mcut' : 6.91831e11, 'galDens' : 0.02, } ] # END CONFIGURATION # ----------------------------------------------------------------------------- # -----------------------------------------------------------------------------