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Merge branch 'master' of https://bitbucket.org/cosmicvoids/vide_public

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This commit is contained in:
P.M. Sutter 2015-10-27 10:23:22 -04:00
commit f190968a81
14 changed files with 556915 additions and 64 deletions
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20
python_tools/void_python_tools/backend/launchers.py
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@ -37,7 +37,7 @@ from netCDF4 import Dataset
from void_python_tools.backend.classes import *
import pickle
import void_python_tools.apTools as vp
import scipy.interpolate
import scipy.interpolate as interpolate
NetCDFFile = Dataset
ncFloat = 'f8' # Double precision
@ -374,7 +374,7 @@ def launchZobov(sample, binPath, zobovDir=None, logDir=None, continueRun=None,
File.close()
# load redshifts
partFile = sampleDir+"/zobov_slice_"+sample.fullName
partFile = zobovDir+"/zobov_slice_"+sample.fullName
File = file(partFile)
chk = np.fromfile(File, dtype=np.int32,count=1)
Np = np.fromfile(File, dtype=np.int32,count=1)
@ -414,16 +414,20 @@ def launchZobov(sample, binPath, zobovDir=None, logDir=None, continueRun=None,
# build selection function interpolation
selfuncData = np.genfromtxt(sample.selFunFile)
selfunc = interpolate.interp1d(selfuncData[:,0], selfuncData[:,1],
kind='cubic')
kind='cubic', bounds_error=False,
fill_value=1.0)
# re-weight and write
vols *= selfunc(redshifts)
## TEST
#redshifts /= 10000.
for i in xrange(len(vols)):
vols[i] *= selfunc(redshifts[i])
volFile = zobovDir+"/vol_"+sampleName+".dat"
volFile = zobovDir+"/vol_weighted_"+sampleName+".dat"
File = file(volFile, 'w')
chk.astype('np.int32').tofile(File)
vols.astype('np.float32').tofile(File)
numPartTot.astype(np.int32).tofile(File)
vols.astype(np.float32).tofile(File)
volFileToUse = zobovDir+"/vol_weighted"+sampleName+".dat"
volFileToUse = zobovDir+"/vol_weighted_"+sampleName+".dat"
else:
volFileToUse = zobovDir+"/vol_"+sampleName+".dat"