From 578ec5c3db30246cf280702de904b0af5ee441d1 Mon Sep 17 00:00:00 2001 From: "P.M. Sutter" Date: Mon, 19 May 2014 21:13:15 -0500 Subject: [PATCH 1/2] removed matplotlib Agg backend call --- python_tools/void_python_tools/backend/classes.py | 2 -- python_tools/void_python_tools/backend/launchers.py | 2 -- 2 files changed, 4 deletions(-) diff --git a/python_tools/void_python_tools/backend/classes.py b/python_tools/void_python_tools/backend/classes.py index 324614b..1101a41 100644 --- a/python_tools/void_python_tools/backend/classes.py +++ b/python_tools/void_python_tools/backend/classes.py @@ -21,8 +21,6 @@ import os from numpy import abs -import matplotlib -matplotlib.use('Agg') LIGHT_SPEED = 299792.458 diff --git a/python_tools/void_python_tools/backend/launchers.py b/python_tools/void_python_tools/backend/launchers.py index e3cc6ba..60f3359 100644 --- a/python_tools/void_python_tools/backend/launchers.py +++ b/python_tools/void_python_tools/backend/launchers.py @@ -32,8 +32,6 @@ import shutil import glob import subprocess import sys -import matplotlib -matplotlib.use('Agg') from pylab import figure from netCDF4 import Dataset from void_python_tools.backend.classes import * From b80676c6fccda30200f34896244116dffa633567 Mon Sep 17 00:00:00 2001 From: "P.M. Sutter" Date: Tue, 20 May 2014 19:03:15 -0500 Subject: [PATCH 2/2] fixed bug in profile building --- python_tools/void_python_tools/voidUtil/profileUtil.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/python_tools/void_python_tools/voidUtil/profileUtil.py b/python_tools/void_python_tools/voidUtil/profileUtil.py index 73e61fe..5bd2ba8 100644 --- a/python_tools/void_python_tools/voidUtil/profileUtil.py +++ b/python_tools/void_python_tools/voidUtil/profileUtil.py @@ -76,7 +76,7 @@ def buildProfile(catalog, rMin, rMax): binCenters = 0.5*(radii[1:] + radii[:-1]) nVoid = len(voidsToStack) - stackedProfile = np.std(allProfiles, axis=0) / np.sqrt(nVoids) + stackedProfile = np.mean(allProfiles, axis=0) sigmas = np.std(allProfiles, axis=0) / np.sqrt(nVoids) return binCenters, stackedProfile, sigmas