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fix to have separate file name and redshift lists in script generation

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This commit is contained in:
P.M. Sutter 2012-11-07 09:27:11 -06:00
parent 8c6add3311
commit de5a7cb354
1 changed files with 14 additions and 8 deletions
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22
pipeline/prepareGadgetCatalog.py
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@ -33,10 +33,13 @@ dataFormat = "gadget"
useLightCone = False useLightCone = False
# common filename of particle files # common filename of particle files
redshiftFileBase = "mdr1_particles_z" particleFileBase = "mdr1_particles_z"
# list of redshifts for the particle files # list of file numbers for the particle files
# to get particle file name, we take redshiftFileBase+redshift # to get particle file name, we take particleFileBase+fileNum
fileNums = (("0.0", "0.53", "1.0"))
# redshift of each file in the above list
redshifts = (("0.0", "0.53", "1.0")) redshifts = (("0.0", "0.53", "1.0"))
# how many independent slices along the z-axis? # how many independent slices along the z-axis?
@ -80,7 +83,7 @@ def getSampleName(setName, redshift, useVel, iSlice=-1, iVol=-1):
#------------------------------------------------------------------------------ #------------------------------------------------------------------------------
# for given dataset parameters, outputs a script for use with analyzeVoids # for given dataset parameters, outputs a script for use with analyzeVoids
def writeScript(setName, dataFileNameBase, def writeScript(setName, dataFileNameBase,
scriptDir, catalogDir, redshifts, numSubvolumes, scriptDir, catalogDir, fileNums, redshifts, numSubvolumes,
numSlices, useVel, lbox, minRadius, omegaM, subsample=1.0, numSlices, useVel, lbox, minRadius, omegaM, subsample=1.0,
suffix=".dat"): suffix=".dat"):
@ -149,7 +152,8 @@ newSample = Sample(dataFile = "{dataFile}",
dataSampleList.append(newSample) dataSampleList.append(newSample)
""" """
for redshift in redshifts: for (iFile, redshift) in enumerate(redshifts):
fileNum = fileNums[iFile]
zBox = float(redshift) zBox = float(redshift)
Om = float(omegaM) Om = float(omegaM)
zBoxMpc = LIGHT_SPEED/100.*vp.angularDiameter(zBox, Om=Om) zBoxMpc = LIGHT_SPEED/100.*vp.angularDiameter(zBox, Om=Om)
@ -181,7 +185,7 @@ dataSampleList.append(newSample)
sliceMinMpc = "%0.1f" % sliceMinMpc sliceMinMpc = "%0.1f" % sliceMinMpc
sliceMaxMpc = "%0.1f" % sliceMaxMpc sliceMaxMpc = "%0.1f" % sliceMaxMpc
dataFileName = dataFileNameBase + redshift + suffix dataFileName = dataFileNameBase + fileNum + suffix
for iX in xrange(numSubvolumes): for iX in xrange(numSubvolumes):
for iY in xrange(numSubvolumes): for iY in xrange(numSubvolumes):
@ -228,10 +232,12 @@ for thisSubSample in subSamples:
print " Doing subsample", thisSubSample, " scripts" print " Doing subsample", thisSubSample, " scripts"
setName = prefix+"ss"+str(thisSubSample) setName = prefix+"ss"+str(thisSubSample)
writeScript(setName, redshiftFileBase, scriptDir, catalogDir, redshifts, writeScript(setName, particleFileBase, scriptDir, catalogDir, fileNums,
redshifts,
numSubvolumes, numSlices, True, lbox, minRadius, omegaM, numSubvolumes, numSlices, True, lbox, minRadius, omegaM,
subsample=thisSubSample, suffix="") subsample=thisSubSample, suffix="")
writeScript(setName, redshiftFileBase, scriptDir, catalogDir, redshifts, writeScript(setName, particleFileBase, scriptDir, catalogDir, fileNums,
redshifts,
numSubvolumes, numSlices, False, lbox, minRadius, omegaM, numSubvolumes, numSlices, False, lbox, minRadius, omegaM,
subsample=thisSubSample, suffix="") subsample=thisSubSample, suffix="")