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renamed start and end stage parameters; removed unused 'regenerate' flag

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This commit is contained in:
Paul M. Sutter 2025-04-22 22:43:59 -04:00
parent 4c48221699
commit ccc2d67cf1
7 changed files with 24 additions and 58 deletions
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5
c_source/pruning/pruneVoids.cpp
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@ -188,7 +188,6 @@ int main(int argc, char **argv) {
int i, p, p2, numPartTot, numZonesTot, dummy, iVoid;
int numVoids;
double tolerance;
FILE *fp;
PART *part, *voidPart, *flaggedPart;
ZONE2PART *zones2Parts;
@ -212,7 +211,6 @@ int main(int argc, char **argv) {
gsl_eigen_symmv_workspace *eigw = gsl_eigen_symmv_alloc(3);
numVoids = args.numVoids_arg;
tolerance = args.tolerance_arg;
clock1 = clock();
@ -271,9 +269,6 @@ int main(int argc, char **argv) {
// which is all particles (including mock boundary galaxies used in old
// versions of VIDE) divided by the total volume of the bounding box
volNorm = numPartTot/(boxLen[0]*boxLen[1]*boxLen[2]);
printf(" VOL NORM = %f\n", volNorm);
printf(" MAX CENTRAL DEN = %e\n", args.maxCentralDen_arg);
fread(&dummy, 1, 4, fp);
fread(temp, numPartTot, 4, fp);

7
c_source/pruning/pruneVoids.ggo
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@ -4,9 +4,9 @@ version "alpha"
option "configFile" - "Configuration filename" string optional
option "partFile" - "Particle file from generateFromCatalog" string required
option "partFile" - "Particle file from prepObservation" string required
option "extraInfo" - "Extra particle file from generateFromCatalog" string required
option "extraInfo" - "Extra particle file from prepObservation" string required
option "voidDesc" - "Void list from ZOBOV" string required
@ -31,12 +31,11 @@ option "omegaM" - "Omega_M for redshift convertion" double optional default="0.2
option "rMin" - "Minimum allowable void radius" double optional default="0.0"
option "outputDir" - "Directory to place outputs" string required
option "sampleName" - "unique string to assign to outputs" string required
option "periodic" - "Set of edges which are periodic" string optional default="xy"
option "tolerance" - "Fraction of void width to consider edge" double optional default="1.0"
option "centralRadFrac" - "Fraction of void radii to consider central region" double optional default="4"
option "maxCentralDen" - "Maximum central density to accept as a void" double optional default="0.2"