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further enhancements to void merger trees

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This commit is contained in:
P.M. Sutter 2012-12-15 21:16:03 -06:00
parent 9ec3b1f0ee
commit c7b9a4f14b
4 changed files with 106 additions and 86 deletions
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64
python_tools/void_python_tools/backend/launchers.py
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@ -308,6 +308,70 @@ def launchPrune(sample, binPath, thisDataPortion=None,
else:
print "already done!"
# -----------------------------------------------------------------------------
def launchVoidOverlap(sample1, sample2, sample1Dir, sample2Dir,
binPath, thisDataPortion=None,
logFile=None, workDir=None,
continueRun=None, outputFile=None):
sampleName1 = sample1.fullName
sampleName2 = sample2.fullName
periodicLine = " --periodic='"
if sample1.dataType != "observation":
if sample1.numSubvolumes == 1: periodicLine += "xy"
if sample1.zBoundaryMpc[0] == 0 and \
sample1.zBoundaryMpc[1] == sample1.boxLen : periodicLine += "z"
periodicLine += "' "
if not (continueRun and jobSuccessful(logFile, "Done!\n")):
cmd = binPath
cmd += " --partFile1=" + sample1Dir+"/zobov_slice_" + \
str(sampleName1)
cmd += " --volFile1=" + sample1Dir+"/vol_" + \
str(sampleName1)+".dat"
cmd += " --voidFile1=" + sample1Dir+"/voidDesc_" + \
thisDataPortion+"_"+str(sampleName1)+".out"
cmd += " --infoFile1=" + sample1Dir+"/zobov_slice_" + \
str(sampleName1)+".par"
cmd += " --barycenterFile1=" + sample1Dir + \
"/barycenters_"+thisDataPortion+"_"+str(sampleName1)+".out"
cmd += " --zoneFile1=" + sample1Dir+"/voidZone_" + \
str(sampleName1)+".dat"
cmd += " --zonePartFile1=" + sample1Dir+"/voidPart_" + \
str(sampleName1)+".dat"
cmd += " --partFile2=" + sample2Dir+"/zobov_slice_" + \
str(sampleName2)
cmd += " --volFile2=" + sample2Dir+"/vol_" + \
str(sampleName2)+".dat"
cmd += " --voidFile2=" + sample2Dir+"/voidDesc_" + \
thisDataPortion+"_"+str(sampleName2)+".out"
cmd += " --infoFile2=" + sample2Dir+"/zobov_slice_" + \
str(sampleName2)+".par"
cmd += " --barycenterFile2=" + sample2Dir + \
"/barycenters_"+thisDataPortion+"_"+str(sampleName2)+".out"
cmd += " --zoneFile2=" + sample2Dir+"/voidZone_" + \
str(sampleName2)+".dat"
cmd += " --zonePartFile2=" + sample2Dir+"/voidPart_" + \
str(sampleName2)+".dat"
#cmd += " --useID"
cmd += periodicLine
cmd += " --outfile=" + outputFile
cmd += " &> " + logFile
os.system(cmd)
if jobSuccessful(logFile, "Done!\n"):
print "done"
else:
print "FAILED!"
exit(-1)
else:
print "already done!"
# -----------------------------------------------------------------------------
def launchStack(sample, stack, binPath, thisDataPortion=None, logDir=None,