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applyMaskToMock now accepts build path

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This commit is contained in:
P.M. Sutter 2012-12-01 08:21:33 -06:00
parent 082bfde711
commit c781c5ee50
2 changed files with 47 additions and 422 deletions
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77
python_tools/pipeline_source/prepareCatalogs.in.py
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@ -236,7 +236,7 @@ for thisSubSample in subSamples:
fileNums,
redshifts, numSubvolumes, numSlices, True, lbox, minRadius,
omegaM, subsample=1.0)
elif dataFormat == "gadget":
elif dataFormat == "gadget" or dataFormat == "lanl":
writeScript(setName, particleFileBase, scriptDir, catalogDir, fileNums,
redshifts,
numSubvolumes, numSlices, False, lbox, minRadius, omegaM,
@ -311,7 +311,7 @@ for thisSubSample in subSamples:
# -----------------------------------------------------------------------------
# now halos
if (args.script or args.all) and dataFormat == "multidark":
if (args.script or args.all) and (dataFormat == "multidark" or dataFormat == "lanl"):
print " Doing halo scripts"
for minHaloMass in minHaloMasses:
@ -319,10 +319,16 @@ if (args.script or args.all) and dataFormat == "multidark":
dataFile = catalogDir+haloFileBase+fileNums[0]
inFile = open(dataFile, 'r')
numPart = 0
for line in inFile:
line = line.split(',')
if minHaloMass == "none" or float(line[6]) > minHaloMass:
numPart += 1
if dataFormat == "multidark":
for line in inFile:
line = line.split(',')
if minHaloMass == "none" or float(line[6]) > minHaloMass:
numPart += 1
elif dataFormat == "lanl":
for line in inFile:
line = line.split(' ')
if minHaloMass == "none" or float(line[0]) > minHaloMass:
numPart += 1
inFile.close()
minRadius = 2*int(np.ceil(lbox/numPart**(1./3.)))
@ -349,10 +355,15 @@ if args.halos or args.all:
dataFile = catalogDir+haloFileBase+fileNums[iRedshift]
inFile = open(dataFile, 'r')
numPart = 0
for line in inFile:
line = line.split(',')
if minHaloMass == "none" or float(line[6]) > minHaloMass:
numPart += 1
if dataFormat == "multidark":
for line in inFile:
line = line.split(',')
if minHaloMass == "none" or float(line[6]) > minHaloMass:
numPart += 1
elif dataFormat == "lanl":
line = line.split(' ')
if minHaloMass == "none" or float(line[0]) > minHaloMass:
numPart += 1
inFile.close()
sampleName = prefix+"halos_min"+str(minHaloMass)+"_z"+redshift
@ -366,12 +377,20 @@ if args.halos or args.all:
inFile = open(dataFile, 'r')
for (iHalo,line) in enumerate(inFile):
line = line.split(',')
if minHaloMass == "none" or float(line[6]) > minHaloMass:
x = float(line[0])
y = float(line[1])
z = float(line[2])
vz = float(line[5])
if dataFormat == "multidark":
line = line.split(',')
if minHaloMass == "none" or float(line[6]) > minHaloMass:
x = float(line[0])
y = float(line[1])
z = float(line[2])
vz = float(line[5])
elif dataFormat == "lanl":
line = line.split(' ')
if minHaloMass == "none" or float(line[0]) > minHaloMass:
x = float(line[1])
y = float(line[2])
z = float(line[3])
vz = float(line[4])
# write to output file
outFile.write("%d %e %e %e %e\n" %(iHalo,x,y,z,vz))
@ -422,14 +441,13 @@ BOX_SIZE {boxSize}
root_filename hod
"""
if (args.script or args.all) and dataFormat == "multidark":
if (args.script or args.all) and (dataFormat == "multidark" or dataFormat == "lanl"):
print " Doing DR7 HOD scripts"
if dataFormat == "multidark":
setName = prefix+"hod_dr72dim2"
writeScript(setName, "md.hod_dr72dim2_z",
setName = prefix+"hod_dr72dim2"
writeScript(setName, prefix+"hod_dr72dim2_z",
scriptDir, catalogDir, fileNums, redshifts,
numSubvolumes, numSlices, False, lbox, 5, omegaM)
writeScript(setName, "md.hod_dr72dim2_z",
writeScript(setName, prefix+"hod_dr72dim2_z",
scriptDir, catalogDir, fileNums, redshifts,
numSubvolumes, numSlices, True, lbox, 5, omegaM)
@ -440,7 +458,7 @@ if args.hod or args.all:
parFileName = "./hod.par"
parFile = open(parFileName, 'w')
haloFile = catalogDir+"/mdr1_halos_z"+fileNums[iRedshift]
haloFile = catalogDir+haloFileBase+fileNums[iRedshift]
parFile.write(parFileText.format(omegaM=omegaM,
hubble=hubble,
redshift=redshift,
@ -456,7 +474,7 @@ if args.hod or args.all:
os.system(hodPath+" "+parFileName+">& /dev/null")
sampleName = getSampleName("md.hod_dr72dim2", redshift, False)
sampleName = getSampleName(prefix+"hod_dr72dim2", redshift, False)
outFileName = catalogDir+"/"+sampleName+".dat"
os.system("mv hod.mock" + " " + outFileName)
@ -464,14 +482,13 @@ if args.hod or args.all:
# -----------------------------------------------------------------------------
# now the BOSS HOD
if (args.script or args.all) and dataFormat == "multidark":
if (args.script or args.all) and (dataFormat == "multidark" or dataFormat == "lanl"):
print " Doing DR9 HOD scripts"
if dataFormat == "multidark":
setName = prefix+"hod_dr9mid"
writeScript(setName, "md.hod_dr9mid_z",
setName = prefix+"hod_dr9mid"
writeScript(setName, prefix+"hod_dr9mid_z",
scriptDir, catalogDir, fileNums, redshifts,
numSubvolumes, numSlices, False, lbox, 15, omegaM)
writeScript(setName, "md.hod_dr9mid_z",
writeScript(setName, prefix+"hod_dr9mid_z",
scriptDir, catalogDir, fileNums, redshifts,
numSubvolumes, numSlices, True, lbox, 15, omegaM)
@ -483,7 +500,7 @@ if args.hod or args.all:
# these parameters come from Manera et al 2012, eq. 26
parFileName = "./hod.par"
parFile = open(parFileName, 'w')
haloFile = catalogDir+"/mdr1_halos_z"+fileNums[iRedshift]
haloFile = catalogDir+haloFileBase+fileNums[iRedshift]
parFile.write(parFileText.format(omegaM=omegaM,
hubble=hubble,
redshift=redshift,
@ -499,7 +516,7 @@ if args.hod or args.all:
os.system(hodPath+" "+parFileName+">& /dev/null")
sampleName = getSampleName("md.hod_dr9mid", redshift, False)
sampleName = getSampleName(prefix+"hod_dr9mid", redshift, False)
outFileName = catalogDir+"/"+sampleName+".dat"
os.system("mv hod.mock" + " " + outFileName)