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Updated CosmoTool to last revision for support of KDTree with periodic boundaries
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Guilhem Lavaux
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161
external/cosmotool/build_tools/gather_sources.py
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161
external/cosmotool/build_tools/gather_sources.py
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@ -0,0 +1,161 @@
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#+
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# This is CosmoTool (./build_tools/gather_sources.py) -- Copyright (C) Guilhem Lavaux (2007-2013)
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#
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# guilhem.lavaux@gmail.com
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#
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# This software is a computer program whose purpose is to provide a toolbox for cosmological
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# data analysis (e.g. filters, generalized Fourier transforms, power spectra, ...)
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#
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# This software is governed by the CeCILL license under French law and
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# abiding by the rules of distribution of free software. You can use,
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# modify and/ or redistribute the software under the terms of the CeCILL
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# license as circulated by CEA, CNRS and INRIA at the following URL
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# "http://www.cecill.info".
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#
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# As a counterpart to the access to the source code and rights to copy,
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# modify and redistribute granted by the license, users are provided only
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# with a limited warranty and the software's author, the holder of the
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# economic rights, and the successive licensors have only limited
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# liability.
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#
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# In this respect, the user's attention is drawn to the risks associated
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# with loading, using, modifying and/or developing or reproducing the
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# software by the user in light of its specific status of free software,
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# that may mean that it is complicated to manipulate, and that also
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# therefore means that it is reserved for developers and experienced
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# professionals having in-depth computer knowledge. Users are therefore
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# encouraged to load and test the software's suitability as regards their
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# requirements in conditions enabling the security of their systems and/or
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# data to be ensured and, more generally, to use and operate it in the
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# same conditions as regards security.
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#
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# The fact that you are presently reading this means that you have had
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# knowledge of the CeCILL license and that you accept its terms.
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#+
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import shutil
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import tempfile
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import re
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from git import Repo,Tree,Blob
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def apply_license(license, relimit, filename):
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header = re.sub(r'@FILENAME@', filename, license)
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f = file(filename)
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lines = f.read()
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f.close()
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lines = re.sub(relimit, '', lines)
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lines = header + lines
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with tempfile.NamedTemporaryFile(delete=False) as tmp_sources:
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tmp_sources.write(lines)
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shutil.move(tmp_sources.name, filename)
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def apply_python_license(filename):
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license="""#+
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# This is CosmoTool (@FILENAME@) -- Copyright (C) Guilhem Lavaux (2007-2013)
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#
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# guilhem.lavaux@gmail.com
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#
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# This software is a computer program whose purpose is to provide a toolbox for cosmological
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# data analysis (e.g. filters, generalized Fourier transforms, power spectra, ...)
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#
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# This software is governed by the CeCILL license under French law and
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# abiding by the rules of distribution of free software. You can use,
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# modify and/ or redistribute the software under the terms of the CeCILL
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# license as circulated by CEA, CNRS and INRIA at the following URL
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# "http://www.cecill.info".
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#
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# As a counterpart to the access to the source code and rights to copy,
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# modify and redistribute granted by the license, users are provided only
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# with a limited warranty and the software's author, the holder of the
|
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# economic rights, and the successive licensors have only limited
|
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# liability.
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#
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# In this respect, the user's attention is drawn to the risks associated
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# with loading, using, modifying and/or developing or reproducing the
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# software by the user in light of its specific status of free software,
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# that may mean that it is complicated to manipulate, and that also
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# therefore means that it is reserved for developers and experienced
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# professionals having in-depth computer knowledge. Users are therefore
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# encouraged to load and test the software's suitability as regards their
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# requirements in conditions enabling the security of their systems and/or
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# data to be ensured and, more generally, to use and operate it in the
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# same conditions as regards security.
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#
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# The fact that you are presently reading this means that you have had
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# knowledge of the CeCILL license and that you accept its terms.
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#+
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"""
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print("Shell/Python file: %s" % filename)
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relimit=r'^#\+\n(#.*\n)*#\+\n'
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apply_license(license, relimit, filename)
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def apply_cpp_license(filename):
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license="""/*+
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This is CosmoTool (@FILENAME@) -- Copyright (C) Guilhem Lavaux (2007-2013)
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guilhem.lavaux@gmail.com
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This software is a computer program whose purpose is to provide a toolbox for cosmological
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data analysis (e.g. filters, generalized Fourier transforms, power spectra, ...)
|
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This software is governed by the CeCILL license under French law and
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abiding by the rules of distribution of free software. You can use,
|
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modify and/ or redistribute the software under the terms of the CeCILL
|
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license as circulated by CEA, CNRS and INRIA at the following URL
|
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"http://www.cecill.info".
|
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|
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As a counterpart to the access to the source code and rights to copy,
|
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modify and redistribute granted by the license, users are provided only
|
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with a limited warranty and the software's author, the holder of the
|
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economic rights, and the successive licensors have only limited
|
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liability.
|
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|
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In this respect, the user's attention is drawn to the risks associated
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with loading, using, modifying and/or developing or reproducing the
|
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software by the user in light of its specific status of free software,
|
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that may mean that it is complicated to manipulate, and that also
|
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therefore means that it is reserved for developers and experienced
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professionals having in-depth computer knowledge. Users are therefore
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encouraged to load and test the software's suitability as regards their
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requirements in conditions enabling the security of their systems and/or
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data to be ensured and, more generally, to use and operate it in the
|
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same conditions as regards security.
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The fact that you are presently reading this means that you have had
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knowledge of the CeCILL license and that you accept its terms.
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+*/
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"""
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relimit = r'^(?s)/\*\+.*\+\*/'
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print("C++ file: %s" % filename)
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apply_license(license, relimit, filename)
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def analyze_tree(prefix, t):
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for ename,entry in t.items():
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if ename == 'external' or ename == 'zobov':
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continue
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if type(entry) == Tree:
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analyze_tree(prefix + "/" + ename, entry)
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elif type(entry) == Blob:
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if ename == './src/hdf5_flash.h' or ename == './src/h5_readFlash.cpp' or ename == './src/h5_readFlash.hpp':
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continue
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if re.match(".*\.(sh|py|pyx)$",ename) != None:
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fname=prefix+"/"+ename
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apply_python_license(fname)
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if re.match('.*\.(cpp|hpp|h)$', ename) != None:
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fname=prefix+"/"+ename
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apply_cpp_license(fname)
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if __name__=="__main__":
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repo = Repo(".")
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assert repo.bare == False
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t = repo.tree()
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analyze_tree(".", t)
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