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Added a patch to scipy-kdtree to fix a np.min bug in query
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external/patch_kdtree
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external/patch_kdtree
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--- periodic_kdtree.py.old 2014-04-18 17:30:39.000000000 +0200
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+++ periodic_kdtree.py 2014-04-18 17:31:59.000000000 +0200
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@@ -102,7 +102,7 @@
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# all neighbors within the given distance_upper_bound".
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# Cap distance_upper_bound
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- distance_upper_bound = np.min(distance_upper_bound,
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+ distance_upper_bound = min(distance_upper_bound,
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self.max_distance_upper_bound)
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# Run queries over all relevant images of x
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@@ -128,7 +128,7 @@
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# is a single point, not an array of points
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# Cap r
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- r = np.min(r, self.max_distance_upper_bound)
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+ r = min(r, self.max_distance_upper_bound)
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# Run queries over all relevant images of x
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results = []
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@@ -213,7 +213,7 @@
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# all neighbors within the given distance_upper_bound".
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# Cap distance_upper_bound
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- distance_upper_bound = np.min(distance_upper_bound,
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+ distance_upper_bound = min(distance_upper_bound,
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self.max_distance_upper_bound)
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# Run queries over all relevant images of x
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