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more updates to preparation scripts

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This commit is contained in:
P.M. Sutter 2012-12-18 12:13:06 -06:00
parent a566c12435
commit 8a4191972b
2 changed files with 14 additions and 13 deletions
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14
python_tools/pipeline_source/prepareCatalogs.in.py
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@ -478,13 +478,13 @@ if (args.hod or args.all) and haloFileBase != "":
workDir=catalogDir))
parFile.close()
# os.system(hodPath+" "+parFileName+">& /dev/null")
#
# sampleName = getSampleName(prefix+"hod_dr72dim2", redshift, False)
# outFileName = catalogDir+"/"+sampleName+".dat"
# os.system("mv %s/hod.mock %s" % (catalogDir, outFileName))
#
# os.system("rm %s/hod.*" % catalogDir)
os.system(hodPath+" "+parFileName+">& /dev/null")
sampleName = getSampleName(prefix+"hod_dr72dim2", redshift, False)
outFileName = catalogDir+"/"+sampleName+".dat"
os.system("mv %s/hod.mock %s" % (catalogDir, outFileName))
os.system("rm %s/hod.*" % catalogDir)
# -----------------------------------------------------------------------------
# now the BOSS HOD

11
python_tools/void_python_tools/backend/launchers.py
View file

@ -254,8 +254,9 @@ def launchPrune(sample, binPath, thisDataPortion=None,
periodicLine = " --periodic='"
if sample.numSubvolumes == 1: periodicLine += "xy"
if sample.zBoundaryMpc[0] == 0 and \
sample.zBoundaryMpc[1] == sample.boxLen : periodicLine += "z"
if sample.zBoundaryMpc[1] - sample.zBoundaryMpc[0] - \
sample.boxLen <= 1.e-1:
periodicLine += "z"
periodicLine += "' "
if not (continueRun and jobSuccessful(logFile, "NetCDF: Not a valid ID\n")):
@ -321,8 +322,8 @@ def launchVoidOverlap(sample1, sample2, sample1Dir, sample2Dir,
periodicLine = " --periodic='"
if sample1.dataType != "observation":
if sample1.numSubvolumes == 1: periodicLine += "xy"
if sample1.zBoundaryMpc[0] == 0 and \
sample1.zBoundaryMpc[1] == sample1.boxLen : periodicLine += "z"
if sample1.zBoundaryMpc[1] - sample1.zBoundaryMpc[0] - sample1.boxLen <= 1.e-1:
periodicLine += "z"
periodicLine += "' "
if not (continueRun and jobSuccessful(logFile, "Done!\n")):
@ -357,7 +358,7 @@ def launchVoidOverlap(sample1, sample2, sample1Dir, sample2Dir,
cmd += " --zonePartFile2=" + sample2Dir+"/voidPart_" + \
str(sampleName2)+".dat"
#cmd += " --useID"
cmd += " --useID"
cmd += periodicLine
cmd += " --outfile=" + outputFile
cmd += " &> " + logFile