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size of subdivison buffer now a parameter

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This commit is contained in:
Paul M. Sutter 2025-05-22 09:13:19 -04:00
parent 8e6c9d3bed
commit 8730193e71
2 changed files with 7 additions and 9 deletions
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7
python_source/vide_pipeline/defaults.py
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@ -37,9 +37,6 @@ endCatalogStage = 3
# if True, will scan log files for last known completed state and run from there
continueRun = True
# re-build the inputs?
regenerateFlag = False
# directory for the input simulation/observational particle files
catalogDir = os.getenv("HOME")+"/workspace/Voids/catalog/"
@ -132,11 +129,13 @@ haloFileColSep = ','
haloFileNumComLines = 0
haloFilePosRescale = 1.0 # rescaling necessary to get Mpc/h
# adjust these two parameters given the memory contraints on your system:
# adjust these parameters given the memory contraints on your system:
# numZobovDivisions: how many sub-volumes per dimension will zobov process
# numZobovThreads: how many sub-volumes to process at once?
# zobovBuffer: fraction of the domain to add to each sub-division
numZobovDivisions = 2
numZobovThreads = 2
zobovBuffer = 0.1
# Maximum density for merging voids
# 0 (equivalent to infinitely large value) -> Merge everything (no threshold)