guilhem_lavaux/vide_public
0
0
Fork 0
mirror of https://bitbucket.org/cosmicvoids/vide_public.git synced 2025-07-05 15:51:12 +00:00
Code Issues Projects Releases Packages Wiki Activity Actions

added script to compare stacks and radial profiles of matched voids

Browse source
This commit is contained in:
P.M. Sutter 2013-03-23 11:50:17 -05:00
parent f699ed372f
commit 8043742123
6 changed files with 184 additions and 37 deletions
Download patch file Download diff file Expand all files Collapse all files

47
crossCompare/plotting/plotNumberFunc.py Normal file → Executable file
View file

@ -1,3 +1,4 @@
#!/usr/bin/env python
#+
# VIDE -- Void IDEntification pipeline -- ./crossCompare/plotting/plotNumberFunc.py
# Copyright (C) 2010-2013 Guilhem Lavaux
@ -17,7 +18,6 @@
# with this program; if not, write to the Free Software Foundation, Inc.,
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
#+
#!/usr/bin/env python
# plots cumulative distributions of number counts
@ -36,8 +36,8 @@ from scipy.stats import ks_2samp
plotNameBase = "compdist"
obsFudgeFactor = 1.0 # what fraction of the volume are we *reall* capturing?
#obsFudgeFactor = .66 # what fraction of the volume are we *reall* capturing?
#obsFudgeFactor = 1.0 # what fraction of the volume are we *reall* capturing?
obsFudgeFactor = .15 # what fraction of the volume are we *reall* capturing?
linewidth = 1
@ -45,7 +45,7 @@ parser = argparse.ArgumentParser(description='Plot.')
parser.add_argument('--show', dest='showPlot', action='store_const',
const=True, default=False,
help='display the plot (default: just write eps)')
parser.add_argument('--parmFile', dest='parmFile', default='datasetsToPlot.py',
parser.add_argument('--parm', dest='parm', default='datasetsToPlot.py',
help='path to parameter file')
args = parser.parse_args()
@ -55,7 +55,7 @@ errorBarsX = np.linspace(0, plotMax, num=nErrorBars)
# ------------------------------------------------------------------------------
filename = args.parmFile
filename = args.parm
print " Loading parameters from", filename
if not os.access(filename, os.F_OK):
print " Cannot find parameter file %s!" % filename
@ -102,7 +102,7 @@ for dataPortion in dataPortions:
boxVol *= 1.e-9 # Mpc->Gpc
filename = workDir+"/"+sampleDirList[iSample]+"/centers_"+dataPortion+"_"+\
filename = workDir+"/"+sampleDirList[iSample]+"/centers_nocut_"+dataPortion+"_"+\
sampleName+".out"
if not os.access(filename, os.F_OK):
print "File not found: ", filename
@ -137,8 +137,13 @@ for dataPortion in dataPortions:
ecolor=colorList[iSample],
fmt=None, label='_nolegend_', capsize=0)
hist, bin_edges = np.histogram(data, bins=100, range=(0,100))
allData.append(hist)
hist, bin_edges = np.histogram(data, bins=40, range=(0,100))
#allData.append(hist)
binCenters = 0.5*(bin_edges[1:] + bin_edges[:-1])
#plt.plot(binCenters, hist, '-',
# label=lineTitle, color=colorList[iSample],
# linewidth=linewidth)
plt.legend(title = "Samples", loc = "upper right", prop={'size':8})
#plt.title(plotTitle)
@ -155,19 +160,19 @@ plt.savefig(figDir+"/fig_"+plotName+".pdf", bbox_inches="tight")
plt.savefig(figDir+"/fig_"+plotName+".eps", bbox_inches="tight")
plt.savefig(figDir+"/fig_"+plotName+".png", bbox_inches="tight")
dataFile = figDir+"/data_"+plotName+".dat"
fp = open(dataFile, 'w')
fp.write("# R [Mpc/h], N [h^3 Gpc^-3]\n")
fp.write("# ")
for sample in dataSampleList:
fp.write(sample.fullName+" ")
fp.write("\n")
for i in xrange(100):
fp.write(str(bin_edges[i]) + " ")
for iSample in xrange(len(dataSampleList)):
fp.write(str(allData[iSample][i])+" ")
fp.write("\n")
fp.close()
#dataFile = figDir+"/data_"+plotName+".dat"
#fp = open(dataFile, 'w')
#fp.write("# R [Mpc/h], N [h^3 Gpc^-3]\n")
#fp.write("# ")
#for sample in dataSampleList:
# fp.write(sample.fullName+" ")
#fp.write("\n")
#for i in xrange(100):
# fp.write(str(bin_edges[i]) + " ")
# for iSample in xrange(len(dataSampleList)):
# fp.write(str(allData[iSample][i])+" ")
# fp.write("\n")
#fp.close()
if args.showPlot:
os.system("display %s" % figDir+"/fig_"+plotName+".png")