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Update cosmotool

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This commit is contained in:
Guilhem Lavaux 2018-07-19 15:11:04 +03:00
parent 387dc4d853
commit 64e05fc180
148 changed files with 1064 additions and 19378 deletions
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52
external/cosmotool/src/fortran.cpp vendored
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@ -43,7 +43,6 @@ using namespace std;
using namespace CosmoTool;
UnformattedRead::UnformattedRead(const string& fname)
throw(NoSuchFileException)
{
f = new ifstream(fname.c_str());
if (!*f)
@ -52,10 +51,10 @@ UnformattedRead::UnformattedRead(const string& fname)
swapOrdering = false;
cSize = Check_32bits;
checkPointRef = checkPointAccum = 0;
recordBuffer = 0;
}
UnformattedRead::UnformattedRead(const char *fname)
throw(NoSuchFileException)
{
f = new ifstream(fname);
if (!*f)
@ -63,11 +62,14 @@ UnformattedRead::UnformattedRead(const char *fname)
swapOrdering = false;
cSize = Check_32bits;
checkPointRef = checkPointAccum = 0;
recordBuffer = 0;
}
UnformattedRead::~UnformattedRead()
{
if (recordBuffer != 0)
delete[] recordBuffer;
delete f;
}
@ -97,7 +99,6 @@ void UnformattedRead::setCheckpointSize(CheckpointSize cs)
}
void UnformattedRead::skip(int64_t off)
throw (InvalidUnformattedAccess)
{
if (checkPointAccum == 0 && checkPointRef == 0)
{
@ -115,8 +116,7 @@ void UnformattedRead::skip(int64_t off)
checkPointAccum += off;
}
void UnformattedRead::beginCheckpoint()
throw (InvalidUnformattedAccess,EndOfFileException)
void UnformattedRead::beginCheckpoint(bool bufferRecord)
{
if (checkPointAccum != 0)
throw InvalidUnformattedAccess();
@ -129,15 +129,26 @@ void UnformattedRead::beginCheckpoint()
if (f->eof())
throw EndOfFileException();
if (bufferRecord) {
std::cout << "Use fast I/O mode" << std::endl;
recordBuffer = new uint8_t[checkPointRef];
f->read(reinterpret_cast<char *>(recordBuffer), checkPointRef);
}
}
void UnformattedRead::endCheckpoint(bool autodrop)
throw (InvalidUnformattedAccess)
{
if (recordBuffer != 0) {
delete[] recordBuffer;
recordBuffer = 0;
}
if (checkPointRef != checkPointAccum)
{
if (!autodrop || checkPointAccum > checkPointRef)
if (!autodrop || checkPointAccum > checkPointRef) {
throw InvalidUnformattedAccess();
}
f->seekg(checkPointRef-checkPointAccum, ios::cur);
}
@ -145,21 +156,25 @@ void UnformattedRead::endCheckpoint(bool autodrop)
checkPointRef = (cSize == Check_32bits) ? 4 : 8;
checkPointAccum = 0;
checkPointRef = (cSize == Check_32bits) ? readInt32() : readInt64();
checkPointRef = (cSize == Check_32bits) ? readUint32() : readInt64();
if (oldCheckPoint != checkPointRef)
if (oldCheckPoint != checkPointRef) {
throw InvalidUnformattedAccess();
}
checkPointAccum = checkPointRef = 0;
}
void UnformattedRead::readOrderedBuffer(void *buffer, int size)
throw (InvalidUnformattedAccess)
{
if ((checkPointAccum+(uint64_t)size) > checkPointRef)
throw InvalidUnformattedAccess();
f->read((char *)buffer, size);
if (recordBuffer != 0) {
memcpy(buffer, &recordBuffer[checkPointAccum], size);
} else {
f->read((char *)buffer, size);
}
if (swapOrdering)
{
@ -171,7 +186,6 @@ void UnformattedRead::readOrderedBuffer(void *buffer, int size)
}
double UnformattedRead::readReal64()
throw (InvalidUnformattedAccess)
{
union
{
@ -185,7 +199,6 @@ double UnformattedRead::readReal64()
}
float UnformattedRead::readReal32()
throw (InvalidUnformattedAccess)
{
union
{
@ -199,7 +212,6 @@ float UnformattedRead::readReal32()
}
uint32_t UnformattedRead::readUint32()
throw (InvalidUnformattedAccess)
{
union
{
@ -213,7 +225,6 @@ uint32_t UnformattedRead::readUint32()
}
int32_t UnformattedRead::readInt32()
throw (InvalidUnformattedAccess)
{
union
{
@ -227,7 +238,6 @@ int32_t UnformattedRead::readInt32()
}
int64_t UnformattedRead::readInt64()
throw (InvalidUnformattedAccess)
{
union
{
@ -243,7 +253,6 @@ int64_t UnformattedRead::readInt64()
//// UnformattedWrite
UnformattedWrite::UnformattedWrite(const string& fname)
throw(NoSuchFileException)
{
f = new ofstream(fname.c_str());
if (!*f)
@ -255,7 +264,6 @@ UnformattedWrite::UnformattedWrite(const string& fname)
}
UnformattedWrite::UnformattedWrite(const char *fname)
throw(NoSuchFileException)
{
f = new ofstream(fname);
if (!*f)
@ -285,7 +293,6 @@ void UnformattedWrite::setCheckpointSize(CheckpointSize cs)
}
void UnformattedWrite::beginCheckpoint()
throw (InvalidUnformattedAccess,FilesystemFullException)
{
if (checkPointAccum != 0)
throw InvalidUnformattedAccess();
@ -303,7 +310,6 @@ void UnformattedWrite::beginCheckpoint()
}
void UnformattedWrite::endCheckpoint()
throw (InvalidUnformattedAccess,FilesystemFullException)
{
if (checkPointAccum == 0)
throw InvalidUnformattedAccess();
@ -335,7 +341,6 @@ void UnformattedWrite::endCheckpoint()
}
void UnformattedWrite::writeOrderedBuffer(void *buffer, int size)
throw (FilesystemFullException)
{
f->write((char *)buffer, size);
@ -352,7 +357,6 @@ void UnformattedWrite::writeOrderedBuffer(void *buffer, int size)
}
void UnformattedWrite::writeReal64(double d)
throw (FilesystemFullException)
{
union
{
@ -366,7 +370,6 @@ void UnformattedWrite::writeReal64(double d)
}
void UnformattedWrite::writeReal32(float f)
throw (FilesystemFullException)
{
union
{
@ -380,7 +383,6 @@ void UnformattedWrite::writeReal32(float f)
}
void UnformattedWrite::writeInt32(int32_t i)
throw (FilesystemFullException)
{
union
{
@ -393,7 +395,6 @@ void UnformattedWrite::writeInt32(int32_t i)
}
void UnformattedWrite::writeInt64(int64_t i)
throw (FilesystemFullException)
{
union
{
@ -406,7 +407,6 @@ void UnformattedWrite::writeInt64(int64_t i)
}
void UnformattedWrite::writeInt8(int8_t i)
throw (FilesystemFullException)
{
union { char b; int8_t i; } a;