Imported Healpix, cfitsio, cosmotool. Added cmake tool to build dependencies (cfitsio, hdf5, netcdf, boost, healpix, gsl, ..). Adjusted CMakeLists.txt

external/cfitsio/iter_b.c

@@ -0,0 +1,114 @@
+#include <string.h>
+#include <stdio.h>
+#include <stdlib.h>
+#include "fitsio.h"
+
+/*
+  This program illustrates how to use the CFITSIO iterator function.
+  It simply prints out the values in a character string and a logical
+  type column in a table, and toggles the value in the logical column
+  so that T -> F and F -> T.
+*/
+main()
+{
+    extern str_iter(); /* external work function is passed to the iterator */
+    fitsfile *fptr;
+    iteratorCol cols[2];
+    int n_cols;
+    long rows_per_loop, offset;
+    int status = 0;
+    char filename[]  = "iter_b.fit";     /* name of rate FITS file */
+
+    /* open the file and move to the correct extension */
+    fits_open_file(&fptr, filename, READWRITE, &status);
+    fits_movnam_hdu(fptr, BINARY_TBL, "iter_test", 0, &status);
+
+    /* define input column structure members for the iterator function */
+    n_cols  = 2;   /* number of columns */
+
+    /* define input column structure members for the iterator function */
+    fits_iter_set_by_name(&cols[0], fptr, "Avalue", TSTRING,  InputOutputCol);
+    fits_iter_set_by_name(&cols[1], fptr, "Lvalue", TLOGICAL, InputOutputCol);
+
+    rows_per_loop = 0;  /* use default optimum number of rows */
+    offset = 0;         /* process all the rows */
+
+    /* apply the  function to each row of the table */
+    printf("Calling iterator function...%d\n", status);
+
+    fits_iterate_data(n_cols, cols, offset, rows_per_loop,
+                      str_iter, 0L, &status);
+
+    fits_close_file(fptr, &status);      /* all done */
+
+    if (status)
+       fits_report_error(stderr, status); /* print out error messages */
+
+    return(status);
+}
+/*--------------------------------------------------------------------------*/
+int str_iter(long totalrows, long offset, long firstrow, long nrows,
+             int ncols, iteratorCol *cols, void *user_strct )
+
+/*
+   Sample iterator function.
+*/
+{
+    int ii;
+
+    /* declare variables static to preserve their values between calls */
+    static char **stringvals;
+    static char *logicalvals;
+
+    /*--------------------------------------------------------*/
+    /*  Initialization procedures: execute on the first call  */
+    /*--------------------------------------------------------*/
+    if (firstrow == 1)
+    {
+       if (ncols != 2)
+           return(-1);  /* number of columns incorrect */
+
+       if (fits_iter_get_datatype(&cols[0]) != TSTRING ||
+           fits_iter_get_datatype(&cols[1]) != TLOGICAL )
+           return(-2);  /* bad data type */
+
+       /* assign the input pointers to the appropriate arrays */
+       stringvals       = (char **) fits_iter_get_array(&cols[0]);
+       logicalvals      = (char *)  fits_iter_get_array(&cols[1]);
+
+       printf("Total rows, No. rows = %d %d\n",totalrows, nrows);
+    }
+
+    /*------------------------------------------*/
+    /*  Main loop: process all the rows of data */
+    /*------------------------------------------*/
+
+    /*  NOTE: 1st element of array is the null pixel value!  */
+    /*  Loop from 1 to nrows, not 0 to nrows - 1.  */
+   
+    for (ii = 1; ii <= nrows; ii++)
+    {
+      printf("%s %d\n", stringvals[ii], logicalvals[ii]);
+      if (logicalvals[ii])
+      {
+         logicalvals[ii] = FALSE;
+         strcpy(stringvals[ii], "changed to false");
+      }
+      else
+      {
+         logicalvals[ii] = TRUE;
+         strcpy(stringvals[ii], "changed to true");
+      }
+    }
+
+    /*-------------------------------------------------------*/
+    /*  Clean up procedures:  after processing all the rows  */
+    /*-------------------------------------------------------*/
+
+    if (firstrow + nrows - 1 == totalrows)
+    {
+      /* no action required in this case */
+    }
+ 
+    return(0);
+}