mirror of
https://bitbucket.org/cosmicvoids/vide_public.git
synced 2025-07-04 23:31:12 +00:00
fixed bug in gadget generation script; prepareGadget now uses separate parameter files; support for random catalogs now enabled
This commit is contained in:
P.M. Sutter
parent
292afacaf5
commit
443b4bdeec
4 changed files with 91 additions and 342 deletions
|
|
@ -113,10 +113,10 @@ if (startCatalogStage <= 4) and (endCatalogStage >= 4):
|
|||
|
||||
for thisDataPortion in dataPortions:
|
||||
plotRedshiftDistribution(workDir, dataSampleList, figDir, showPlot=False,
|
||||
dataPortion=thisDataPortion, setName=catalogName)
|
||||
dataPortion=thisDataPortion, setName=setName)
|
||||
plotSizeDistribution(workDir, dataSampleList, figDir, showPlot=False,
|
||||
dataPortion=thisDataPortion, setName=catalogName)
|
||||
dataPortion=thisDataPortion, setName=setName)
|
||||
plotNumberDistribution(workDir, dataSampleList, figDir, showPlot=False,
|
||||
dataPortion=thisDataPortion, setName=catalogName)
|
||||
dataPortion=thisDataPortion, setName=setName)
|
||||
|
||||
print "\n Done!"
|
||||
|
|
|
|||
|
|
@ -9,66 +9,17 @@ import os
|
|||
import sys
|
||||
import void_python_tools as vp
|
||||
import argparse
|
||||
import imp
|
||||
|
||||
# -----------------------------------------------------------------------------
|
||||
# -----------------------------------------------------------------------------
|
||||
# CONFIGURATION
|
||||
# ------------------------------------------------------------------------------
|
||||
|
||||
# directory for the input simulation/observational particle files
|
||||
catalogDir = os.getenv("HOME")+"/workspace/Voids/catalogs/multidark/"
|
||||
def my_import(name):
|
||||
mod = __import__(name)
|
||||
components = name.split('.')
|
||||
for comp in components[1:]:
|
||||
mod = getattr(mod, comp)
|
||||
return mod
|
||||
|
||||
# path to HOD code
|
||||
hodPath = os.getenv("HOME")+"/projects/Voids/hod/HOD.x"
|
||||
|
||||
# where to put the final void catalog, figures, and output logs
|
||||
voidOutputDir = os.getenv("HOME")+"/workspace/Voids/multidark/"
|
||||
figDir = os.getenv("PWD")+"/../figs/multidark/"
|
||||
logDir = os.getenv("PWD")+"/../logs/multidark/"
|
||||
|
||||
# where to place the pipeline scripts
|
||||
scriptDir = os.getenv("PWD")+"/multidark/"
|
||||
|
||||
# simulation or observation?
|
||||
dataType = "simulation"
|
||||
|
||||
# available formats for simulation: gadget, multidark
|
||||
dataFormat = "multidark"
|
||||
dataUnit = 1 # as multiple of Mpc/h
|
||||
|
||||
# place particles on the lightcone?
|
||||
useLightCone = True
|
||||
|
||||
# common filename of particle files
|
||||
particleFileBase = "mdr1_particles_z"
|
||||
|
||||
# list of file numbers for the particle files
|
||||
# to get particle file name, we take particleFileBase+fileNum
|
||||
fileNums = (("0.0", "0.53", "1.0"))
|
||||
|
||||
# redshift of each file in the above list
|
||||
redshifts = (("0.0", "0.53", "1.0"))
|
||||
|
||||
# how many independent slices along the z-axis?
|
||||
numSlices = 4
|
||||
|
||||
# how many subdivisions along the x- and y- axis?
|
||||
# ( = 2 will make 4 subvolumes for each slice, = 3 will make 9, etc.)
|
||||
numSubvolumes = 1
|
||||
|
||||
# prefix to give all outputs
|
||||
prefix = "md_"
|
||||
|
||||
# list of desired subsamples
|
||||
subSamples = ((0.1, 0.05, 0.01, 0.002, 0.001, 0.0004, 0.0002))
|
||||
|
||||
# simulation information
|
||||
numPart = 1024*1024*1024
|
||||
lbox = 1000 # Mpc/h
|
||||
omegaM = 0.27
|
||||
hubble = 0.70
|
||||
|
||||
# END CONFIGURATION
|
||||
# -----------------------------------------------------------------------------
|
||||
# -----------------------------------------------------------------------------
|
||||
|
||||
LIGHT_SPEED = 299792.458
|
||||
|
|
@ -85,12 +36,25 @@ parser.add_argument('--halos', dest='halos', action='store_const',
|
|||
help='write halos')
|
||||
parser.add_argument('--hod', dest='hod', action='store_const',
|
||||
const=True, default=False,
|
||||
help='write hos')
|
||||
help='write hod')
|
||||
parser.add_argument('--all', dest='all', action='store_const',
|
||||
const=True, default=False,
|
||||
help='write everything')
|
||||
parser.add_argument('--parmFile', dest='parmFile',
|
||||
default="",
|
||||
help='path to parameter file')
|
||||
args = parser.parse_args()
|
||||
|
||||
|
||||
filename = args.parmFile
|
||||
print " Loading parameters from", filename
|
||||
if not os.access(filename, os.F_OK):
|
||||
print " Cannot find parameter file %s!" % filename
|
||||
exit(-1)
|
||||
parms = imp.load_source("name", filename)
|
||||
globals().update(vars(parms))
|
||||
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
def getSampleName(setName, redshift, useVel, iSlice=-1, iVol=-1):
|
||||
|
||||
|
|
@ -253,6 +217,7 @@ newSample.addStack({zMin}, {zMax}, {minRadius}+18, {minRadius}+24, True, False)
|
|||
#------------------------------------------------------------------------------
|
||||
#------------------------------------------------------------------------------
|
||||
if not os.access(scriptDir, os.F_OK): os.mkdir(scriptDir)
|
||||
if not os.access(catalogDir, os.F_OK): os.mkdir(catalogDir)
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# first the directly downsampled runs
|
||||
|
|
@ -288,45 +253,73 @@ for thisSubSample in subSamples:
|
|||
redshifts,
|
||||
numSubvolumes, numSlices, True, lbox, minRadius, omegaM,
|
||||
subsample=thisSubSample, suffix="")
|
||||
elif dataFormat == "random":
|
||||
writeScript(setName, "ran.ss"+str(thisSubSample)+"_z",
|
||||
scriptDir, catalogDir, fileNums,
|
||||
redshifts,
|
||||
numSubvolumes, numSlices, False, lbox, minRadius, omegaM,
|
||||
subsample=1.0)
|
||||
|
||||
if args.subsample or args.all:
|
||||
print " Doing subsample", thisSubSample
|
||||
|
||||
for (iRedshift, redshift) in enumerate(redshifts):
|
||||
print " redshift", redshift
|
||||
dataFile = catalogDir+"/"+particleFileBase+fileNums[iRedshift]
|
||||
inFile = open(dataFile, 'r')
|
||||
|
||||
if dataFormat == "multidark":
|
||||
dataFile = catalogDir+"/"+particleFileBase+fileNums[iRedshift]
|
||||
inFile = open(dataFile, 'r')
|
||||
|
||||
sampleName = "md.ss"+str(thisSubSample)+"_z"+redshift
|
||||
outFile = open(catalogDir+"/"+sampleName+".dat", 'w')
|
||||
sampleName = "md.ss"+str(thisSubSample)+"_z"+redshift
|
||||
outFile = open(catalogDir+"/"+sampleName+".dat", 'w')
|
||||
|
||||
outFile.write("%f\n" %(lbox))
|
||||
outFile.write("%s" %(omegaM))
|
||||
outFile.write("%s" %(hubble))
|
||||
outFile.write("%s\n" %(redshift))
|
||||
outFile.write("%d\n" %(maxKeep))
|
||||
outFile.write("%f\n" %(lbox))
|
||||
outFile.write("%s\n" %(omegaM))
|
||||
outFile.write("%s\n" %(hubble))
|
||||
outFile.write("%s\n" %(redshift))
|
||||
outFile.write("%d\n" %(maxKeep))
|
||||
|
||||
numKept = 0
|
||||
for line in inFile:
|
||||
if np.random.uniform() > keepFraction: continue
|
||||
numKept += 1
|
||||
if numKept > maxKeep: break
|
||||
line = line.split(',')
|
||||
x = float(line[0])
|
||||
y = float(line[1])
|
||||
z = float(line[2])
|
||||
vz = float(line[3])
|
||||
numKept = 0
|
||||
for line in inFile:
|
||||
if np.random.uniform() > keepFraction: continue
|
||||
numKept += 1
|
||||
if numKept > maxKeep: break
|
||||
line = line.split(',')
|
||||
x = float(line[0])
|
||||
y = float(line[1])
|
||||
z = float(line[2])
|
||||
vz = float(line[3])
|
||||
|
||||
outFile.write("%e %e %e %e\n" %(x,y,z,vz))
|
||||
outFile.write("%e %e %e %e\n" %(x,y,z,vz))
|
||||
|
||||
outFile.write("-99 -99 -99 -99\n")
|
||||
inFile.close()
|
||||
outFile.close()
|
||||
|
||||
elif dataFormat == "random":
|
||||
sampleName = "ran.ss"+str(thisSubSample)+"_z"+redshift
|
||||
outFile = open(catalogDir+"/"+sampleName+".dat", 'w')
|
||||
|
||||
outFile.write("%f\n" %(lbox))
|
||||
outFile.write("%s\n" %(omegaM))
|
||||
outFile.write("%s\n" %(hubble))
|
||||
outFile.write("%s\n" %(redshift))
|
||||
outFile.write("%d\n" %(maxKeep))
|
||||
|
||||
for i in xrange(int(maxKeep)):
|
||||
x = np.random.uniform()*lbox
|
||||
y = np.random.uniform()*lbox
|
||||
z = np.random.uniform()*lbox
|
||||
|
||||
outFile.write("%e %e %e %e\n" %(x,y,z, 0.))
|
||||
|
||||
outFile.write("-99 -99 -99 -99\n")
|
||||
outFile.close()
|
||||
|
||||
outFile.write("-99 -99 -99 -99\n")
|
||||
print "KEEPING:", numKept, "...predicted:", maxKeep
|
||||
inFile.close()
|
||||
outFile.close()
|
||||
|
||||
# -----------------------------------------------------------------------------
|
||||
# now halos
|
||||
if args.script or args.all:
|
||||
if (args.script or args.all) and dataFormat == "multidark":
|
||||
print " Doing halo scripts"
|
||||
|
||||
dataFile = catalogDir+"/mdr1_halos_z"+fileNums[0]
|
||||
|
|
@ -362,8 +355,8 @@ if args.halos or args.all:
|
|||
outFile = open(catalogDir+"/"+sampleName+".dat", 'w')
|
||||
|
||||
outFile.write("%f\n" %(lbox))
|
||||
outFile.write("%s" %(omegaM))
|
||||
outFile.write("%s" %(hubble))
|
||||
outFile.write("%s\n" %(omegaM))
|
||||
outFile.write("%s\n" %(hubble))
|
||||
outFile.write("%s\n" %(redshift))
|
||||
outFile.write("%d\n" %(numPart))
|
||||
|
||||
|
|
@ -425,7 +418,7 @@ BOX_SIZE {boxSize}
|
|||
root_filename hod
|
||||
"""
|
||||
|
||||
if args.script or args.all:
|
||||
if (args.script or args.all) and dataFormat == "multidark":
|
||||
print " Doing DR7 HOD scripts"
|
||||
if dataFormat == "multidark":
|
||||
setName = prefix+"hod_dr72dim2"
|
||||
|
|
@ -467,16 +460,16 @@ if args.hod or args.all:
|
|||
|
||||
# -----------------------------------------------------------------------------
|
||||
# now the BOSS HOD
|
||||
if args.script or args.all:
|
||||
if (args.script or args.all) and dataFormat == "multidark":
|
||||
print " Doing DR9 HOD scripts"
|
||||
if dataFormat == "multidark":
|
||||
setName = prefix+"hod_dr9mid"
|
||||
writeScript(setName, "md.hod_dr9mid_z",
|
||||
scriptDir, catalogDir, fileNums, redshifts,
|
||||
numSubvolumes, numSlices, False, lbox, 5, omegaM)
|
||||
writeScript(prefix, "md.hod_dr9mid_z",
|
||||
numSubvolumes, numSlices, False, lbox, 15, omegaM)
|
||||
writeScript(setName, "md.hod_dr9mid_z",
|
||||
scriptDir, catalogDir, fileNums, redshifts,
|
||||
numSubvolumes, numSlices, True, lbox, 5, omegaM)
|
||||
numSubvolumes, numSlices, True, lbox, 15, omegaM)
|
||||
|
||||
if args.hod or args.all:
|
||||
print " Doing DR9 HOD"
|
||||
|
|
|
|||
|
|
@ -1,246 +0,0 @@
|
|||
#!/usr/bin/env python
|
||||
|
||||
# script which prepares inputs for gadget-based void run
|
||||
|
||||
import numpy as np
|
||||
import os
|
||||
import sys
|
||||
import void_python_tools as vp
|
||||
import argparse
|
||||
|
||||
# -----------------------------------------------------------------------------
|
||||
# -----------------------------------------------------------------------------
|
||||
# CONFIGURATION
|
||||
|
||||
# directory for the input simulation/observational particle files
|
||||
catalogDir = os.getenv("HOME")+"/workspace/Voids/catalogs/gadget/"
|
||||
|
||||
# where to put the final void catalog, figures, and output logs
|
||||
voidOutputDir = os.getenv("HOME")+"/workspace/Voids/gadget/"
|
||||
figDir = os.getenv("PWD")+"/../figs/gadget/"
|
||||
logDir = os.getenv("PWD")+"/../logs/gadget/"
|
||||
|
||||
# where to place the pipeline scripts
|
||||
scriptDir = os.getenv("PWD")+"/gadget/"
|
||||
|
||||
# simulation or observation?
|
||||
dataType = "simulation"
|
||||
|
||||
# available formats for simulation: gadget, multidark
|
||||
dataFormat = "gadget"
|
||||
dataUnit = 1 # as multiple of Mpc/h
|
||||
|
||||
# place particles on the lightcone?
|
||||
useLightCone = False
|
||||
|
||||
# common filename of particle files
|
||||
particleFileBase = "mdr1_particles_z"
|
||||
|
||||
# list of file numbers for the particle files
|
||||
# to get particle file name, we take particleFileBase+fileNum
|
||||
fileNums = (("0.0", "0.53", "1.0"))
|
||||
|
||||
# redshift of each file in the above list
|
||||
redshifts = (("0.0", "0.53", "1.0"))
|
||||
|
||||
# how many independent slices along the z-axis?
|
||||
numSlices = 4
|
||||
|
||||
# how many subdivisions along the x- and y- axis?
|
||||
# ( = 2 will make 4 subvolumes for each slice, = 3 will make 9, etc.)
|
||||
numSubvolumes = 1
|
||||
|
||||
# prefix to give all outputs
|
||||
prefix = "gadget_"
|
||||
|
||||
# list of desired subsamples
|
||||
subSamples = [ 1.0, 0.1 ]
|
||||
|
||||
# simulation information
|
||||
numPart = 1024*1024*1024
|
||||
lbox = 1000 # Mpc/h
|
||||
omegaM = 0.27
|
||||
hubble = 0.70
|
||||
|
||||
# END CONFIGURATION
|
||||
# -----------------------------------------------------------------------------
|
||||
# -----------------------------------------------------------------------------
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
LIGHT_SPEED = 299792.458
|
||||
|
||||
def getSampleName(setName, redshift, useVel, iSlice=-1, iVol=-1):
|
||||
|
||||
sampleName = setName
|
||||
|
||||
if useVel: setName += "_pv"
|
||||
|
||||
if iSlice != -1: sampleName += "_s" + str(iSlice)
|
||||
|
||||
if iVol != -1: sampleName += "_d" + iVol
|
||||
|
||||
return sampleName
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# for given dataset parameters, outputs a script for use with analyzeVoids
|
||||
def writeScript(setName, dataFileNameBase,
|
||||
scriptDir, catalogDir, fileNums, redshifts, numSubvolumes,
|
||||
numSlices, useVel, lbox, minRadius, omegaM, subsample=1.0,
|
||||
suffix=".dat"):
|
||||
|
||||
if useVel: setName += "_pv"
|
||||
|
||||
scriptFileName = scriptDir + "/" + setName + ".py"
|
||||
scriptFile = open(scriptFileName, 'w')
|
||||
|
||||
scriptFile.write("""#!/usr/bin/env/python
|
||||
import os
|
||||
from void_python_tools.backend.classes import *
|
||||
|
||||
continueRun = False
|
||||
startCatalogStage = 1
|
||||
endCatalogStage = 4
|
||||
|
||||
startAPStage = 1
|
||||
endAPStage = 7
|
||||
|
||||
ZOBOV_PATH = os.getenv("PWD")+"/../zobov/"
|
||||
CTOOLS_PATH = os.getenv("PWD")+"/../c_tools/"
|
||||
freshStack = True
|
||||
errorBars = "CALCULATED"
|
||||
numIncoherentRuns = 100
|
||||
ranSeed = 101010
|
||||
useLCDM = False
|
||||
bias = 1.16
|
||||
|
||||
dataPortions = ["central"]
|
||||
dataSampleList = []
|
||||
""")
|
||||
|
||||
dataInfo = """
|
||||
setName = "{setName}"
|
||||
|
||||
workDir = "{voidOutputDir}/{setName}/"
|
||||
inputDataDir = "{inputDataDir}"
|
||||
figDir = "{figDir}/{setName}/"
|
||||
logDir = "{logDir}/{setName}/"
|
||||
"""
|
||||
scriptFile.write(dataInfo.format(setName=setName, figDir=figDir,
|
||||
logDir=logDir, voidOutputDir=voidOutputDir,
|
||||
inputDataDir=catalogDir))
|
||||
|
||||
sampleInfo = """
|
||||
newSample = Sample(dataFile = "{dataFile}",
|
||||
dataFormat = "{dataFormat}",
|
||||
dataUnit = {dataUnit},
|
||||
fullName = "{sampleName}",
|
||||
nickName = "{sampleName}",
|
||||
dataType = "simulation",
|
||||
zBoundary = ({zMin}, {zMax}),
|
||||
zRange = ({zMin}, {zMax}),
|
||||
zBoundaryMpc = ({zMinMpc}, {zMaxMpc}),
|
||||
omegaM = {omegaM},
|
||||
minVoidRadius = {minRadius},
|
||||
includeInHubble = True,
|
||||
partOfCombo = False,
|
||||
isCombo = False,
|
||||
boxLen = {boxLen},
|
||||
usePecVel = {usePecVel},
|
||||
numSubvolumes = {numSubvolumes},
|
||||
mySubvolume = "{mySubvolume}",
|
||||
numSubDivisions = 4,
|
||||
useLightCone = {useLightCone},
|
||||
subsample = {subsample})
|
||||
dataSampleList.append(newSample)
|
||||
"""
|
||||
|
||||
for (iFile, redshift) in enumerate(redshifts):
|
||||
fileNum = fileNums[iFile]
|
||||
zBox = float(redshift)
|
||||
Om = float(omegaM)
|
||||
zBoxMpc = LIGHT_SPEED/100.*vp.angularDiameter(zBox, Om=Om)
|
||||
boxMaxMpc = zBoxMpc + lbox
|
||||
|
||||
# converter from redshift to comoving distance
|
||||
zVsDY = np.linspace(0., zBox+8*lbox*100./LIGHT_SPEED, 10000)
|
||||
zVsDX = np.zeros(len(zVsDY))
|
||||
for i in xrange(len(zVsDY)):
|
||||
zVsDX[i] = vp.angularDiameter(zVsDY[i], Om=Om)
|
||||
|
||||
if useLightCone:
|
||||
boxWidthZ = np.interp(vp.angularDiameter(zBox,Om=Om)+100. / \
|
||||
LIGHT_SPEED*lbox, zVsDX, zVsDY)-zBox
|
||||
dzSafe = 0.03
|
||||
else:
|
||||
boxWidthZ = lbox*100./LIGHT_SPEED
|
||||
dzSafe = 0.0
|
||||
|
||||
for iSlice in xrange(numSlices):
|
||||
sliceMin = zBox + dzSafe + iSlice*(boxWidthZ-dzSafe)/numSlices
|
||||
sliceMax = zBox + dzSafe + (iSlice+1)*(boxWidthZ-dzSafe)/numSlices
|
||||
|
||||
sliceMinMpc = sliceMin*LIGHT_SPEED/100.
|
||||
sliceMaxMpc = sliceMax*LIGHT_SPEED/100.
|
||||
|
||||
sliceMin = "%0.2f" % sliceMin
|
||||
sliceMax = "%0.2f" % sliceMax
|
||||
sliceMinMpc = "%0.1f" % sliceMinMpc
|
||||
sliceMaxMpc = "%0.1f" % sliceMaxMpc
|
||||
|
||||
dataFileName = dataFileNameBase + fileNum + suffix
|
||||
|
||||
for iX in xrange(numSubvolumes):
|
||||
for iY in xrange(numSubvolumes):
|
||||
|
||||
mySubvolume = "%d%d" % (iX, iY)
|
||||
|
||||
sampleName = getSampleName(setName, redshift, useVel,
|
||||
iSlice=iSlice, iVol=mySubvolume)
|
||||
|
||||
scriptFile.write(sampleInfo.format(dataFile=dataFileName,
|
||||
dataFormat=dataFormat,
|
||||
dataUnit=dataUnit,
|
||||
sampleName=sampleName,
|
||||
zMin=sliceMin,
|
||||
zMax=sliceMax,
|
||||
zMinMpc=sliceMinMpc,
|
||||
zMaxMpc=sliceMaxMpc,
|
||||
omegaM=Om,
|
||||
boxLen=lbox,
|
||||
usePecVel=useVel,
|
||||
minRadius=minRadius,
|
||||
numSubvolumes=numSubvolumes,
|
||||
mySubvolume=mySubvolume,
|
||||
useLightCone=useLightCone,
|
||||
subsample=subsample))
|
||||
|
||||
scriptFile.close()
|
||||
return
|
||||
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
#------------------------------------------------------------------------------
|
||||
if not os.access(scriptDir, os.F_OK): os.mkdir(scriptDir)
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# first the directly downsampled runs
|
||||
# Note: ss0.002 ~ SDSS DR7 dim2
|
||||
# ss0.0004 ~ SDSS DR9 mid
|
||||
baseResolution = float(numPart)/lbox/lbox/lbox # particles/Mpc^3
|
||||
for thisSubSample in subSamples:
|
||||
|
||||
keepFraction = float(thisSubSample) / baseResolution
|
||||
maxKeep = keepFraction * numPart
|
||||
minRadius = int(np.ceil(lbox/maxKeep**(1./3)))
|
||||
|
||||
print " Doing subsample", thisSubSample, " scripts"
|
||||
setName = prefix+"ss"+str(thisSubSample)
|
||||
writeScript(setName, particleFileBase, scriptDir, catalogDir, fileNums,
|
||||
redshifts,
|
||||
numSubvolumes, numSlices, True, lbox, minRadius, omegaM,
|
||||
subsample=thisSubSample, suffix="")
|
||||
writeScript(setName, particleFileBase, scriptDir, catalogDir, fileNums,
|
||||
redshifts,
|
||||
numSubvolumes, numSlices, False, lbox, minRadius, omegaM,
|
||||
subsample=thisSubSample, suffix="")
|
||||
|
||||
|
|
@ -106,7 +106,7 @@ def launchGenerate(sample, binPath, workDir=None, inputDataDir=None,
|
|||
else:
|
||||
useLightConeString = ""
|
||||
|
||||
if sample.dataFormat == "multidark":
|
||||
if sample.dataFormat == "multidark" or sample.dataFormat == "random":
|
||||
dataFileLine = "multidark " + datafile
|
||||
elif sample.dataFormat == "gadget":
|
||||
dataFileLine = "gadget " + datafile
|
||||
|
|
@ -197,8 +197,10 @@ def launchZobov(sample, binPath, zobovDir=None, logDir=None, continueRun=None):
|
|||
if os.access(zobovDir+"/voidDesc_"+sampleName+".out", os.F_OK):
|
||||
os.unlink(zobovDir+"/voidDesc_"+sampleName+".out")
|
||||
|
||||
cmd = "%s/vozinit %s 0.1 1.0 2 %s %g %s %s %s >& %s" % \
|
||||
(binPath, datafile, \
|
||||
numThreads = 2
|
||||
|
||||
cmd = "%s/vozinit %s 0.1 1.0 %g %s %g %s %s %s >& %s" % \
|
||||
(binPath, datafile, numThreads, \
|
||||
"_"+sampleName, sample.numSubDivisions, \
|
||||
binPath, zobovDir, maskIndex, logFile)
|
||||
os.system(cmd)
|
||||
|
|
|
|||
Loading…
Add table
Add a link
Reference in a new issue