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Moved source codes into new subdirectories to make the organization cleaner. Created new CMakeLists accordingly.
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pipeline_tools/mock/generateFromCatalog.ggo
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pipeline_tools/mock/generateFromCatalog.ggo
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package "generateFromCatalog"
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version "alpha"
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option "configFile" - "Configuration filename" string optional
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option "catalog" - "Input NYU-VAGC catalog" string required
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option "mask" - "Healpix mask of unobserved data (in Equatorial coordinates)" string required
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option "density_fake" - "Number density of boundary fake tracers (1 h^3/ Mpc^3)" double optional default="1"
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option "output" - "Filename of particle datafile" string required
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option "params" - "Output parameters of the datacube" string required
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option "box_thickness" - "Thickness of the limiting mask" double optional default="1"
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option "box_density" - "Fake Galaxy density on the box" double optional default="1"
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