From 29723fff069883f768fc12d38ce4c35c3f376272 Mon Sep 17 00:00:00 2001 From: Guilhem Lavaux Date: Mon, 28 Apr 2014 08:52:27 +0200 Subject: [PATCH] updated copyright notice --- README | 2 +- analysis/datasetsToAnalyze.py | 6 +++--- analysis/xcor.py | 19 +++++++++++++++++++ build_tools/gather_sources.py | 17 +++++++++-------- c_tools/analysis/voidOverlap.cpp | 4 ++-- c_tools/hod/complex.h | 18 ++++++++++++++++++ c_tools/hod/header.h | 18 ++++++++++++++++++ c_tools/hod/nrutil.h | 18 ++++++++++++++++++ c_tools/libzobov/contour_pixels.cpp | 4 ++-- c_tools/libzobov/contour_pixels.hpp | 6 +++--- c_tools/libzobov/gslIntegrate.hpp | 6 +++--- c_tools/libzobov/loadZobov.cpp | 4 ++-- c_tools/libzobov/loadZobov.hpp | 6 +++--- c_tools/libzobov/particleInfo.cpp | 4 ++-- c_tools/libzobov/particleInfo.hpp | 6 +++--- c_tools/libzobov/voidTree.hpp | 6 +++--- c_tools/mock/generateFromCatalog.cpp | 4 ++-- c_tools/mock/generateMock.cpp | 4 ++-- c_tools/mock/generateTestMock.cpp | 4 ++-- c_tools/mock/loaders/basic_loader.cpp | 4 ++-- c_tools/mock/loaders/flash_loader.cpp | 4 ++-- c_tools/mock/loaders/gadget_loader.cpp | 4 ++-- c_tools/mock/loaders/multidark_loader.cpp | 4 ++-- c_tools/mock/loaders/ramses_loader.cpp | 4 ++-- c_tools/mock/loaders/sdf_loader.cpp | 4 ++-- c_tools/mock/loaders/sdfloader_internal.hpp | 6 +++--- c_tools/mock/loaders/simulation_loader.cpp | 4 ++-- c_tools/mock/loaders/simulation_loader.hpp | 6 +++--- c_tools/stacking/pruneVoids.cpp | 4 ++-- c_tools/zobov2/jozov2/jozov2.cpp | 18 ++++++++++++++++++ c_tools/zobov2/jozov2/jozov2.hpp | 18 ++++++++++++++++++ c_tools/zobov2/jozov2/jozov2_io.cpp | 18 ++++++++++++++++++ c_tools/zobov2/jozov2/jozov2_watershed.cpp | 18 ++++++++++++++++++ c_tools/zobov2/jozov2/jozov2_zones.cpp | 18 ++++++++++++++++++ c_tools/zobov2/jozov2/zobov.hpp | 18 ++++++++++++++++++ c_tools/zobov2/voz1b1/voz.h | 18 ++++++++++++++++++ c_tools/zobov2/voz1b1/voz1b1.cpp | 18 ++++++++++++++++++ c_tools/zobov2/voz1b1/voz_io.cpp | 18 ++++++++++++++++++ c_tools/zobov2/voz1b1/voz_io.hpp | 18 ++++++++++++++++++ crossCompare/analysis/makeCocenterProfiles.py | 19 +++++++++++++++++++ crossCompare/analysis/overlapVoids.py | 19 +++++++++++++++++++ crossCompare/parm/sampleParm.py | 19 +++++++++++++++++++ crossCompare/plotting/datasetsToPlot.py | 6 +++--- crossCompare/plotting/plotCocenterProfiles.py | 19 +++++++++++++++++++ crossCompare/plotting/plotDenMaps.py | 19 +++++++++++++++++++ crossCompare/plotting/plotMatchEllipRatio.py | 19 +++++++++++++++++++ crossCompare/plotting/plotMatchSizeRatio.py | 19 +++++++++++++++++++ crossCompare/plotting/plotNumberFunc.py | 19 +++++++++++++++++++ pipeline/datasets/example_observation.py | 6 +++--- pipeline/datasets/example_simulation.py | 6 +++--- pipeline/generateCatalog.py | 19 +++++++++++++++++++ python_tools/pipeline_source/defaults.py | 6 +++--- .../pipeline_source/prepareCatalogs.in.py | 19 +++++++++++++++++++ python_tools/setup.py | 4 ++-- python_tools/void_python_tools/__init__.py | 4 ++-- .../void_python_tools/apTools/__init__.py | 4 ++-- .../apTools/chi2/__init__.py | 4 ++-- .../apTools/chi2/cosmologyTools.py | 4 ++-- .../apTools/profiles/__init__.py | 4 ++-- .../apTools/profiles/getSurveyProps.py | 4 ++-- .../void_python_tools/backend/__init__.py | 4 ++-- .../void_python_tools/backend/classes.py | 4 ++-- .../void_python_tools/backend/launchers.py | 4 ++-- .../void_python_tools/partUtil/__init__.py | 6 +++--- .../void_python_tools/partUtil/partUtil.py | 6 +++--- .../void_python_tools/plotting/__init__.py | 4 ++-- .../void_python_tools/plotting/plotDefs.py | 4 ++-- .../void_python_tools/plotting/plotTools.py | 4 ++-- .../void_python_tools/xcor/__init__.py | 6 +++--- .../void_python_tools/xcor/xcorlib.py | 19 +++++++++++++++++++ 70 files changed, 573 insertions(+), 110 deletions(-) mode change 100755 => 100644 analysis/xcor.py mode change 100755 => 100644 crossCompare/analysis/makeCocenterProfiles.py mode change 100755 => 100644 crossCompare/analysis/overlapVoids.py mode change 100755 => 100644 crossCompare/parm/sampleParm.py mode change 100755 => 100644 crossCompare/plotting/plotCocenterProfiles.py mode change 100755 => 100644 crossCompare/plotting/plotDenMaps.py mode change 100755 => 100644 crossCompare/plotting/plotMatchEllipRatio.py mode change 100755 => 100644 crossCompare/plotting/plotMatchSizeRatio.py mode change 100755 => 100644 crossCompare/plotting/plotNumberFunc.py mode change 100755 => 100644 pipeline/generateCatalog.py diff --git a/README b/README index ab1889d..c29738f 100644 --- a/README +++ b/README @@ -12,7 +12,7 @@ This is VIDE, the Void IDentification and Examination pipeline. License/Copyright information ----------------------------- -Copyright (C) 2010-2013 Guilhem Lavaux, 2011-2013 P.M. Sutter. +Copyright (C) 2010-2014 Guilhem Lavaux, 2011-2014 P.M. Sutter. This software is put under the GNU Public License. Please see LICENSE for further information. diff --git a/analysis/datasetsToAnalyze.py b/analysis/datasetsToAnalyze.py index 1d3a922..d982424 100644 --- a/analysis/datasetsToAnalyze.py +++ b/analysis/datasetsToAnalyze.py @@ -1,7 +1,7 @@ #+ -# VIDE -- Void IDentification and Examination -- ./crossCompare/analysis/datasetsToAnalyze.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# VIDE -- Void IDentification and Examination -- ./analysis/datasetsToAnalyze.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/analysis/xcor.py b/analysis/xcor.py old mode 100755 new mode 100644 index fda7440..168899f --- a/analysis/xcor.py +++ b/analysis/xcor.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./analysis/xcor.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python #+ # VIDE -- Void IDentification and Examination -- ./crossCompare/analysis/mergerTree.py diff --git a/build_tools/gather_sources.py b/build_tools/gather_sources.py index 472a4de..f4464bd 100644 --- a/build_tools/gather_sources.py +++ b/build_tools/gather_sources.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./build_tools/gather_sources.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by @@ -41,8 +41,8 @@ def apply_license(license, relimit, filename): def apply_python_license(filename): license="""#+ # VIDE -- Void IDentification and Examination -- @FILENAME@ -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by @@ -68,8 +68,8 @@ def apply_python_license(filename): def apply_cpp_license(filename): license="""/*+ VIDE -- Void IDentification and Examination -- @FILENAME@ - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by @@ -85,13 +85,14 @@ def apply_cpp_license(filename): 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +*/ """ - relimit = r'^(?s)/\*\+.*\+\*/' + relimit = r'^(?s)/\*\+.*\+\*/\n' print("C++ file: %s" % filename) apply_license(license, relimit, filename) def analyze_tree(prefix, t): - for ename,entry in t.items(): + for entry in t: + ename = entry.name if ename == 'external' or ename == 'zobov': continue if type(entry) == Tree: diff --git a/c_tools/analysis/voidOverlap.cpp b/c_tools/analysis/voidOverlap.cpp index 209e728..3d67b1a 100644 --- a/c_tools/analysis/voidOverlap.cpp +++ b/c_tools/analysis/voidOverlap.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/analysis/voidOverlap.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/hod/complex.h b/c_tools/hod/complex.h index 99e065d..29f20cb 100644 --- a/c_tools/hod/complex.h +++ b/c_tools/hod/complex.h @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/hod/complex.h + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ /* CAUTION: This is the ANSI C (only) version of the Numerical Recipes utility file complex.h. Do not confuse this file with the same-named file complex.h that is supplied in the 'misc' subdirectory. diff --git a/c_tools/hod/header.h b/c_tools/hod/header.h index e73f9ed..b20a72c 100644 --- a/c_tools/hod/header.h +++ b/c_tools/hod/header.h @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/hod/header.h + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #include "nrutil.h" #include "stdlib.h" #include "stdio.h" diff --git a/c_tools/hod/nrutil.h b/c_tools/hod/nrutil.h index e4fed5d..c6702cb 100644 --- a/c_tools/hod/nrutil.h +++ b/c_tools/hod/nrutil.h @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/hod/nrutil.h + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ /* CAUTION: This is the ANSI C (only) version of the Numerical Recipes utility file nrutil.h. Do not confuse this file with the same-named file nrutil.h that is supplied in the 'misc' subdirectory. diff --git a/c_tools/libzobov/contour_pixels.cpp b/c_tools/libzobov/contour_pixels.cpp index 4ca2247..011acff 100644 --- a/c_tools/libzobov/contour_pixels.cpp +++ b/c_tools/libzobov/contour_pixels.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/libzobov/contour_pixels.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/libzobov/contour_pixels.hpp b/c_tools/libzobov/contour_pixels.hpp index 8095024..3837ecb 100644 --- a/c_tools/libzobov/contour_pixels.hpp +++ b/c_tools/libzobov/contour_pixels.hpp @@ -1,7 +1,7 @@ /*+ - VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/contour_pixels.hpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + VIDE -- Void IDentification and Examination -- ./c_tools/libzobov/contour_pixels.hpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/libzobov/gslIntegrate.hpp b/c_tools/libzobov/gslIntegrate.hpp index 140ec81..99aae5f 100644 --- a/c_tools/libzobov/gslIntegrate.hpp +++ b/c_tools/libzobov/gslIntegrate.hpp @@ -1,7 +1,7 @@ /*+ - VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/gslIntegrate.hpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + VIDE -- Void IDentification and Examination -- ./c_tools/libzobov/gslIntegrate.hpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/libzobov/loadZobov.cpp b/c_tools/libzobov/loadZobov.cpp index 2b5fbb1..2f1c7a6 100644 --- a/c_tools/libzobov/loadZobov.cpp +++ b/c_tools/libzobov/loadZobov.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/libzobov/loadZobov.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/libzobov/loadZobov.hpp b/c_tools/libzobov/loadZobov.hpp index 0bcf70a..84e32ed 100644 --- a/c_tools/libzobov/loadZobov.hpp +++ b/c_tools/libzobov/loadZobov.hpp @@ -1,7 +1,7 @@ /*+ - VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/loadZobov.hpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + VIDE -- Void IDentification and Examination -- ./c_tools/libzobov/loadZobov.hpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/libzobov/particleInfo.cpp b/c_tools/libzobov/particleInfo.cpp index 59d0864..398209e 100644 --- a/c_tools/libzobov/particleInfo.cpp +++ b/c_tools/libzobov/particleInfo.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/libzobov/particleInfo.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/libzobov/particleInfo.hpp b/c_tools/libzobov/particleInfo.hpp index 325be23..7c306a3 100644 --- a/c_tools/libzobov/particleInfo.hpp +++ b/c_tools/libzobov/particleInfo.hpp @@ -1,7 +1,7 @@ /*+ - VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/particleInfo.hpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + VIDE -- Void IDentification and Examination -- ./c_tools/libzobov/particleInfo.hpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/libzobov/voidTree.hpp b/c_tools/libzobov/voidTree.hpp index f958547..3e11c6b 100644 --- a/c_tools/libzobov/voidTree.hpp +++ b/c_tools/libzobov/voidTree.hpp @@ -1,7 +1,7 @@ /*+ - VIDE -- Void IDEntification pipeline -- ./c_tools/libzobov/voidTree.hpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + VIDE -- Void IDentification and Examination -- ./c_tools/libzobov/voidTree.hpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/generateFromCatalog.cpp b/c_tools/mock/generateFromCatalog.cpp index b9d09e2..e3c3937 100644 --- a/c_tools/mock/generateFromCatalog.cpp +++ b/c_tools/mock/generateFromCatalog.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/mock/generateFromCatalog.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/generateMock.cpp b/c_tools/mock/generateMock.cpp index 7f44b99..6e26d7e 100644 --- a/c_tools/mock/generateMock.cpp +++ b/c_tools/mock/generateMock.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/mock/generateMock.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/generateTestMock.cpp b/c_tools/mock/generateTestMock.cpp index 1099dbb..9abf618 100644 --- a/c_tools/mock/generateTestMock.cpp +++ b/c_tools/mock/generateTestMock.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/mock/generateTestMock.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/loaders/basic_loader.cpp b/c_tools/mock/loaders/basic_loader.cpp index 31254b6..0cefba0 100644 --- a/c_tools/mock/loaders/basic_loader.cpp +++ b/c_tools/mock/loaders/basic_loader.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/mock/loaders/basic_loader.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/loaders/flash_loader.cpp b/c_tools/mock/loaders/flash_loader.cpp index 02e7df7..30cf8a3 100644 --- a/c_tools/mock/loaders/flash_loader.cpp +++ b/c_tools/mock/loaders/flash_loader.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/mock/loaders/flash_loader.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/loaders/gadget_loader.cpp b/c_tools/mock/loaders/gadget_loader.cpp index 6abd00d..804bb40 100644 --- a/c_tools/mock/loaders/gadget_loader.cpp +++ b/c_tools/mock/loaders/gadget_loader.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/mock/loaders/gadget_loader.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/loaders/multidark_loader.cpp b/c_tools/mock/loaders/multidark_loader.cpp index b9d0118..01a37dd 100644 --- a/c_tools/mock/loaders/multidark_loader.cpp +++ b/c_tools/mock/loaders/multidark_loader.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/mock/loaders/multidark_loader.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/loaders/ramses_loader.cpp b/c_tools/mock/loaders/ramses_loader.cpp index f6bcf81..938ea77 100644 --- a/c_tools/mock/loaders/ramses_loader.cpp +++ b/c_tools/mock/loaders/ramses_loader.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/mock/loaders/ramses_loader.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/loaders/sdf_loader.cpp b/c_tools/mock/loaders/sdf_loader.cpp index eb02eb0..f72aae6 100644 --- a/c_tools/mock/loaders/sdf_loader.cpp +++ b/c_tools/mock/loaders/sdf_loader.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/mock/loaders/sdf_loader.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/loaders/sdfloader_internal.hpp b/c_tools/mock/loaders/sdfloader_internal.hpp index fb00537..7fc91b4 100644 --- a/c_tools/mock/loaders/sdfloader_internal.hpp +++ b/c_tools/mock/loaders/sdfloader_internal.hpp @@ -1,7 +1,7 @@ /*+ - VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/sdfloader_internal.hpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + VIDE -- Void IDentification and Examination -- ./c_tools/mock/loaders/sdfloader_internal.hpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/loaders/simulation_loader.cpp b/c_tools/mock/loaders/simulation_loader.cpp index e5cc53e..80e09b2 100644 --- a/c_tools/mock/loaders/simulation_loader.cpp +++ b/c_tools/mock/loaders/simulation_loader.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/mock/loaders/simulation_loader.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/mock/loaders/simulation_loader.hpp b/c_tools/mock/loaders/simulation_loader.hpp index ba8b2da..8805702 100644 --- a/c_tools/mock/loaders/simulation_loader.hpp +++ b/c_tools/mock/loaders/simulation_loader.hpp @@ -1,7 +1,7 @@ /*+ - VIDE -- Void IDEntification pipeline -- ./c_tools/mock/loaders/simulation_loader.hpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + VIDE -- Void IDentification and Examination -- ./c_tools/mock/loaders/simulation_loader.hpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/stacking/pruneVoids.cpp b/c_tools/stacking/pruneVoids.cpp index ae27469..a6c0c9d 100644 --- a/c_tools/stacking/pruneVoids.cpp +++ b/c_tools/stacking/pruneVoids.cpp @@ -1,7 +1,7 @@ /*+ VIDE -- Void IDentification and Examination -- ./c_tools/stacking/pruneVoids.cpp - Copyright (C) 2010-2013 Guilhem Lavaux - Copyright (C) 2011-2013 P. M. Sutter + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by diff --git a/c_tools/zobov2/jozov2/jozov2.cpp b/c_tools/zobov2/jozov2/jozov2.cpp index 718b8e9..f4cb142 100644 --- a/c_tools/zobov2/jozov2/jozov2.cpp +++ b/c_tools/zobov2/jozov2/jozov2.cpp @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/zobov2/jozov2/jozov2.cpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #include #include #include diff --git a/c_tools/zobov2/jozov2/jozov2.hpp b/c_tools/zobov2/jozov2/jozov2.hpp index f23d3c9..5def611 100644 --- a/c_tools/zobov2/jozov2/jozov2.hpp +++ b/c_tools/zobov2/jozov2/jozov2.hpp @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/zobov2/jozov2/jozov2.hpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #ifndef __JOZOV2_HPP #define __JOZOV2_HPP diff --git a/c_tools/zobov2/jozov2/jozov2_io.cpp b/c_tools/zobov2/jozov2/jozov2_io.cpp index 3632745..cc6abf7 100644 --- a/c_tools/zobov2/jozov2/jozov2_io.cpp +++ b/c_tools/zobov2/jozov2/jozov2_io.cpp @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/zobov2/jozov2/jozov2_io.cpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #include #include #include diff --git a/c_tools/zobov2/jozov2/jozov2_watershed.cpp b/c_tools/zobov2/jozov2/jozov2_watershed.cpp index 365e836..7382c93 100644 --- a/c_tools/zobov2/jozov2/jozov2_watershed.cpp +++ b/c_tools/zobov2/jozov2/jozov2_watershed.cpp @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/zobov2/jozov2/jozov2_watershed.cpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #ifdef OPENMP #include #endif diff --git a/c_tools/zobov2/jozov2/jozov2_zones.cpp b/c_tools/zobov2/jozov2/jozov2_zones.cpp index 19d3357..e091c3d 100644 --- a/c_tools/zobov2/jozov2/jozov2_zones.cpp +++ b/c_tools/zobov2/jozov2/jozov2_zones.cpp @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/zobov2/jozov2/jozov2_zones.cpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #include #include #include "jozov2.hpp" diff --git a/c_tools/zobov2/jozov2/zobov.hpp b/c_tools/zobov2/jozov2/zobov.hpp index 832f071..e083ffa 100644 --- a/c_tools/zobov2/jozov2/zobov.hpp +++ b/c_tools/zobov2/jozov2/zobov.hpp @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/zobov2/jozov2/zobov.hpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #ifndef __ZOBOV_HPP #define __ZOBOV_HPP diff --git a/c_tools/zobov2/voz1b1/voz.h b/c_tools/zobov2/voz1b1/voz.h index 1d48e92..5294f86 100644 --- a/c_tools/zobov2/voz1b1/voz.h +++ b/c_tools/zobov2/voz1b1/voz.h @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/zobov2/voz1b1/voz.h + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #ifndef __VOZ_H #define __VOZ_H diff --git a/c_tools/zobov2/voz1b1/voz1b1.cpp b/c_tools/zobov2/voz1b1/voz1b1.cpp index d9ff28a..f0aef3f 100644 --- a/c_tools/zobov2/voz1b1/voz1b1.cpp +++ b/c_tools/zobov2/voz1b1/voz1b1.cpp @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/zobov2/voz1b1/voz1b1.cpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #include #include #include diff --git a/c_tools/zobov2/voz1b1/voz_io.cpp b/c_tools/zobov2/voz1b1/voz_io.cpp index d8dea31..07d489a 100644 --- a/c_tools/zobov2/voz1b1/voz_io.cpp +++ b/c_tools/zobov2/voz1b1/voz_io.cpp @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/zobov2/voz1b1/voz_io.cpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #include #include #include diff --git a/c_tools/zobov2/voz1b1/voz_io.hpp b/c_tools/zobov2/voz1b1/voz_io.hpp index 77a1e5c..70cba30 100644 --- a/c_tools/zobov2/voz1b1/voz_io.hpp +++ b/c_tools/zobov2/voz1b1/voz_io.hpp @@ -1,3 +1,21 @@ +/*+ + VIDE -- Void IDentification and Examination -- ./c_tools/zobov2/voz1b1/voz_io.hpp + Copyright (C) 2010-2014 Guilhem Lavaux + Copyright (C) 2011-2014 P. M. Sutter + + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; version 2 of the License. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ++*/ #ifndef __VOZ_IO_HPP #define __VOZ_IO_HPP diff --git a/crossCompare/analysis/makeCocenterProfiles.py b/crossCompare/analysis/makeCocenterProfiles.py old mode 100755 new mode 100644 index 685aa85..4274936 --- a/crossCompare/analysis/makeCocenterProfiles.py +++ b/crossCompare/analysis/makeCocenterProfiles.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./crossCompare/analysis/makeCocenterProfiles.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python #+ # VIDE -- Void IDentification and Examination -- ./pipeline/apAnalysis.py diff --git a/crossCompare/analysis/overlapVoids.py b/crossCompare/analysis/overlapVoids.py old mode 100755 new mode 100644 index f20450a..269e9b1 --- a/crossCompare/analysis/overlapVoids.py +++ b/crossCompare/analysis/overlapVoids.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./crossCompare/analysis/overlapVoids.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python #+ # VIDE -- Void IDentification and Examination -- ./crossCompare/analysis/mergerTree.py diff --git a/crossCompare/parm/sampleParm.py b/crossCompare/parm/sampleParm.py old mode 100755 new mode 100644 index e2381d0..7aa74b2 --- a/crossCompare/parm/sampleParm.py +++ b/crossCompare/parm/sampleParm.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./crossCompare/parm/sampleParm.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python diff --git a/crossCompare/plotting/datasetsToPlot.py b/crossCompare/plotting/datasetsToPlot.py index 19002cf..c1ebf1a 100644 --- a/crossCompare/plotting/datasetsToPlot.py +++ b/crossCompare/plotting/datasetsToPlot.py @@ -1,7 +1,7 @@ #+ -# VIDE -- Void IDEntification pipeline -- ./crossCompare/plotting/datasetsToPlot.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# VIDE -- Void IDentification and Examination -- ./crossCompare/plotting/datasetsToPlot.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/crossCompare/plotting/plotCocenterProfiles.py b/crossCompare/plotting/plotCocenterProfiles.py old mode 100755 new mode 100644 index fbb861e..a14e7b0 --- a/crossCompare/plotting/plotCocenterProfiles.py +++ b/crossCompare/plotting/plotCocenterProfiles.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./crossCompare/plotting/plotCocenterProfiles.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python #+ # VIDE -- Void IDentification and Examination -- ./pipeline/apAnalysis.py diff --git a/crossCompare/plotting/plotDenMaps.py b/crossCompare/plotting/plotDenMaps.py old mode 100755 new mode 100644 index a690bfb..a12c1a2 --- a/crossCompare/plotting/plotDenMaps.py +++ b/crossCompare/plotting/plotDenMaps.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./crossCompare/plotting/plotDenMaps.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python #+ # VIDE -- Void IDentification and Examination -- ./pipeline/apAnalysis.py diff --git a/crossCompare/plotting/plotMatchEllipRatio.py b/crossCompare/plotting/plotMatchEllipRatio.py old mode 100755 new mode 100644 index 6793127..7847809 --- a/crossCompare/plotting/plotMatchEllipRatio.py +++ b/crossCompare/plotting/plotMatchEllipRatio.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./crossCompare/plotting/plotMatchEllipRatio.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python # plots cumulative distributions of number counts diff --git a/crossCompare/plotting/plotMatchSizeRatio.py b/crossCompare/plotting/plotMatchSizeRatio.py old mode 100755 new mode 100644 index 215b6d2..315fed1 --- a/crossCompare/plotting/plotMatchSizeRatio.py +++ b/crossCompare/plotting/plotMatchSizeRatio.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./crossCompare/plotting/plotMatchSizeRatio.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python # plots cumulative distributions of number counts diff --git a/crossCompare/plotting/plotNumberFunc.py b/crossCompare/plotting/plotNumberFunc.py old mode 100755 new mode 100644 index 00ee6ec..12c022c --- a/crossCompare/plotting/plotNumberFunc.py +++ b/crossCompare/plotting/plotNumberFunc.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./crossCompare/plotting/plotNumberFunc.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python # plots cumulative distributions of number counts diff --git a/pipeline/datasets/example_observation.py b/pipeline/datasets/example_observation.py index bde05a1..f84a964 100644 --- a/pipeline/datasets/example_observation.py +++ b/pipeline/datasets/example_observation.py @@ -1,7 +1,7 @@ #+ -# VIDE -- Void IDentification and Examination -- ./pipeline/sdss/sdss_dr7LCDM.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# VIDE -- Void IDentification and Examination -- ./pipeline/datasets/example_observation.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/pipeline/datasets/example_simulation.py b/pipeline/datasets/example_simulation.py index 44191fa..be30a18 100644 --- a/pipeline/datasets/example_simulation.py +++ b/pipeline/datasets/example_simulation.py @@ -1,7 +1,7 @@ #+ -# VIDE -- Void IDEntification pipeline -- ./pipeline/datasets/mergertree.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# VIDE -- Void IDentification and Examination -- ./pipeline/datasets/example_simulation.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/pipeline/generateCatalog.py b/pipeline/generateCatalog.py old mode 100755 new mode 100644 index bf71148..1403e8d --- a/pipeline/generateCatalog.py +++ b/pipeline/generateCatalog.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./pipeline/generateCatalog.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python #+ # VIDE -- Void IDentification and Examination -- ./pipeline/generateCatalog.py diff --git a/python_tools/pipeline_source/defaults.py b/python_tools/pipeline_source/defaults.py index f675ff3..75488d2 100644 --- a/python_tools/pipeline_source/defaults.py +++ b/python_tools/pipeline_source/defaults.py @@ -1,7 +1,7 @@ #+ -# VIDE -- Void IDentification and Examination -- ./pipeline/datasets/mergertree.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# VIDE -- Void IDentification and Examination -- ./python_tools/pipeline_source/defaults.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/pipeline_source/prepareCatalogs.in.py b/python_tools/pipeline_source/prepareCatalogs.in.py index b718fe3..1b43885 100644 --- a/python_tools/pipeline_source/prepareCatalogs.in.py +++ b/python_tools/pipeline_source/prepareCatalogs.in.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./python_tools/pipeline_source/prepareCatalogs.in.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ #!/usr/bin/env python #+ # VIDE -- Void IDentification and Examination -- ./python_tools/pipeline_source/prepareCatalogs.in.py diff --git a/python_tools/setup.py b/python_tools/setup.py index 482837d..b844a77 100644 --- a/python_tools/setup.py +++ b/python_tools/setup.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/setup.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/__init__.py b/python_tools/void_python_tools/__init__.py index fd37450..1fa20d0 100644 --- a/python_tools/void_python_tools/__init__.py +++ b/python_tools/void_python_tools/__init__.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/__init__.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/apTools/__init__.py b/python_tools/void_python_tools/apTools/__init__.py index f6af7d9..a685d74 100644 --- a/python_tools/void_python_tools/apTools/__init__.py +++ b/python_tools/void_python_tools/apTools/__init__.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/apTools/__init__.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/apTools/chi2/__init__.py b/python_tools/void_python_tools/apTools/chi2/__init__.py index c85f49f..6d43595 100644 --- a/python_tools/void_python_tools/apTools/chi2/__init__.py +++ b/python_tools/void_python_tools/apTools/chi2/__init__.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/apTools/chi2/__init__.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/apTools/chi2/cosmologyTools.py b/python_tools/void_python_tools/apTools/chi2/cosmologyTools.py index 9b01534..9e28541 100644 --- a/python_tools/void_python_tools/apTools/chi2/cosmologyTools.py +++ b/python_tools/void_python_tools/apTools/chi2/cosmologyTools.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/apTools/chi2/cosmologyTools.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/apTools/profiles/__init__.py b/python_tools/void_python_tools/apTools/profiles/__init__.py index 6015350..d9dc59b 100644 --- a/python_tools/void_python_tools/apTools/profiles/__init__.py +++ b/python_tools/void_python_tools/apTools/profiles/__init__.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/apTools/profiles/__init__.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/apTools/profiles/getSurveyProps.py b/python_tools/void_python_tools/apTools/profiles/getSurveyProps.py index c3d37c7..d66b3c6 100644 --- a/python_tools/void_python_tools/apTools/profiles/getSurveyProps.py +++ b/python_tools/void_python_tools/apTools/profiles/getSurveyProps.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/apTools/profiles/getSurveyProps.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/backend/__init__.py b/python_tools/void_python_tools/backend/__init__.py index db12e12..a3bd500 100644 --- a/python_tools/void_python_tools/backend/__init__.py +++ b/python_tools/void_python_tools/backend/__init__.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/backend/__init__.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/backend/classes.py b/python_tools/void_python_tools/backend/classes.py index 40d5b62..324614b 100644 --- a/python_tools/void_python_tools/backend/classes.py +++ b/python_tools/void_python_tools/backend/classes.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/backend/classes.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/backend/launchers.py b/python_tools/void_python_tools/backend/launchers.py index 1a56372..e3cc6ba 100644 --- a/python_tools/void_python_tools/backend/launchers.py +++ b/python_tools/void_python_tools/backend/launchers.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/backend/launchers.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/partUtil/__init__.py b/python_tools/void_python_tools/partUtil/__init__.py index 7e0c1f8..3992494 100644 --- a/python_tools/void_python_tools/partUtil/__init__.py +++ b/python_tools/void_python_tools/partUtil/__init__.py @@ -1,7 +1,7 @@ #+ -# VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/plotting/__init__.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/partUtil/__init__.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/partUtil/partUtil.py b/python_tools/void_python_tools/partUtil/partUtil.py index 4f695e1..1e6802d 100644 --- a/python_tools/void_python_tools/partUtil/partUtil.py +++ b/python_tools/void_python_tools/partUtil/partUtil.py @@ -1,7 +1,7 @@ #+ -# VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/plotting/__init__.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/partUtil/partUtil.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/plotting/__init__.py b/python_tools/void_python_tools/plotting/__init__.py index c53f8af..d00996e 100644 --- a/python_tools/void_python_tools/plotting/__init__.py +++ b/python_tools/void_python_tools/plotting/__init__.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/plotting/__init__.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/plotting/plotDefs.py b/python_tools/void_python_tools/plotting/plotDefs.py index fbdaf02..2de8e15 100644 --- a/python_tools/void_python_tools/plotting/plotDefs.py +++ b/python_tools/void_python_tools/plotting/plotDefs.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/plotting/plotDefs.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/plotting/plotTools.py b/python_tools/void_python_tools/plotting/plotTools.py index 8dca84b..3de824b 100644 --- a/python_tools/void_python_tools/plotting/plotTools.py +++ b/python_tools/void_python_tools/plotting/plotTools.py @@ -1,7 +1,7 @@ #+ # VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/plotting/plotTools.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/xcor/__init__.py b/python_tools/void_python_tools/xcor/__init__.py index 31dc0a5..af03f0a 100644 --- a/python_tools/void_python_tools/xcor/__init__.py +++ b/python_tools/void_python_tools/xcor/__init__.py @@ -1,7 +1,7 @@ #+ -# VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/plotting/__init__.py -# Copyright (C) 2010-2013 Guilhem Lavaux -# Copyright (C) 2011-2013 P. M. Sutter +# VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/xcor/__init__.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/python_tools/void_python_tools/xcor/xcorlib.py b/python_tools/void_python_tools/xcor/xcorlib.py index 535c90d..9200dee 100644 --- a/python_tools/void_python_tools/xcor/xcorlib.py +++ b/python_tools/void_python_tools/xcor/xcorlib.py @@ -1,3 +1,22 @@ +#+ +# VIDE -- Void IDentification and Examination -- ./python_tools/void_python_tools/xcor/xcorlib.py +# Copyright (C) 2010-2014 Guilhem Lavaux +# Copyright (C) 2011-2014 P. M. Sutter +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; version 2 of the License. +# +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License along +# with this program; if not, write to the Free Software Foundation, Inc., +# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +#+ import numpy as np def cic( x, Lbox, Lboxcut = 0, Nmesh = 128, weights = None ):