guilhem_lavaux/vide_public
0
0
Fork 0
mirror of https://bitbucket.org/cosmicvoids/vide_public.git synced 2025-07-04 15:21:11 +00:00
Code Issues Projects Releases Packages Wiki Activity Actions

cleaned up survey volume calculations. now uses correct z range, which corrects mean tracer separation estimation

Browse source
This commit is contained in:
Paul M. Sutter 2025-04-22 20:02:30 -04:00
parent cee027a759
commit 1b4751958f
4 changed files with 20 additions and 28 deletions
Download patch file Download diff file Expand all files Collapse all files

8
python_source/backend/launchers.py
View file

@ -115,9 +115,7 @@ def launchPrep(sample, binPath, workDir=None, inputDataDir=None,
# compute mean particle separation
log.write("\nFlagging edge galaxies.\n")
(boxVol, nbar) = getSurveyProps(sample.maskFile, sample.zRange[0],
sample.zRange[1], sample.zRange[0], sample.zRange[1], "all",
sample.omegaM, useComoving=useComoving)
(boxVol, nbar) = getSurveyProps(sample)
numTracers = int(open("total_particles.txt", "r").read())
sample.meanPartSep = (1.*numTracers/boxVol/nbar)**(-1/3.)
@ -153,9 +151,7 @@ def launchPrep(sample, binPath, workDir=None, inputDataDir=None,
# compute mean particle separation
# TODO - clean up this duplicate to cover all continueRun options
(boxVol, nbar) = getSurveyProps(sample.maskFile, sample.zRange[0],
sample.zRange[1], sample.zRange[0], sample.zRange[1], "all",
sample.omegaM, useComoving=useComoving)
(boxVol, nbar) = getSurveyProps(sample)
numTracers = int(open("total_particles.txt", "r").read())
sample.meanPartSep = (1.*numTracers/boxVol/nbar)**(-1/3.)

14
python_source/backend/surveyTools.py
View file

@ -30,11 +30,17 @@ from backend.cosmologyTools import *
__all__=['getSurveyProps', 'getNside', 'figureOutMask', 'findEdgeGalaxies']
# -----------------------------------------------------------------------------
# returns the volume and galaxy density for a given redshit slice
def getSurveyProps(maskFile, zmin, zmax, selFunMin, selFunMax, portion,
omegaM, selectionFuncFile=None, useComoving=False):
# returns the survey volume and scaled galaxy density for a given redshit slice
def getSurveyProps(sample):
#LIGHT_SPEED = 299792.458
maskFile = sample.maskFile
zmin = sample.zBoundary[0]
zmax = sample.zBoundary[1]
selFunMin = sample.zBoundary[0]
selFunMax = sample.zBoundary[1]
omegaM = sample.omegaM
selectionFuncFile = sample.selFunFile
useComoving = sample.useComoving
mask = healpy.read_map(maskFile)
area = (1.*np.size(np.where(mask > 0)) / np.size(mask)) * 4.*np.pi

11
python_source/voidUtil/catalogUtil.py
View file

@ -169,14 +169,9 @@ def getVolNorm(sampleDir):
else:
maskFile = sampleDir+"/"+os.path.basename(sample.maskFile)
print("Using maskfile found in: " + maskFile)
props = getSurveyProps(maskFile, sample.zBoundary[0],
sample.zBoundary[1],
sample.zBoundary[0],
sample.zBoundary[1],
"all",
sample.omegaM,
selectionFuncFile=sample.selFunFile,
useComoving=sample.useComoving)
props = getSurveyProps(sample)
surveyVol = props[0]
volNormObs = nGal/surveyVol

9
python_source/voidUtil/plotUtil.py
View file

@ -80,12 +80,7 @@ def plotNumberFunction(catalogList,
if sample.dataType == "observation":
maskFile = sample.maskFile
boxVol = sp.getSurveyProps(maskFile,
sample.zBoundary[0], sample.zBoundary[1],
sample.zRange[0], sample.zRange[1], "all",
selectionFuncFile=sample.selFunFile,
omegaM=sample.omegaM)[0]
boxVol = sp.getSurveyProps(sample)[0]
else:
boxVol = sample.boxLen*sample.boxLen*(sample.zBoundaryMpc[1] -
sample.zBoundaryMpc[0])
@ -138,7 +133,7 @@ def plotNumberFunction(catalogList,
distList.append((binCentersToUse, mean, lower, upper))
plt.legend(loc = "upper right", fancybox=True, prop={'size':14})
plt.legend(loc = "lower left", fancybox=True, prop={'size':14})
plt.savefig(figDir+"/fig_"+plotName+".pdf", bbox_inches="tight")
#plt.savefig(figDir+"/fig_"+plotName+".eps", bbox_inches="tight")